Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G140400.2 | Wheat | cytosol | 97.7 | 97.7 |
TraesCS2D01G143100.1 | Wheat | cytosol | 60.46 | 93.23 |
HORVU2Hr1G024970.1 | Barley | nucleus | 30.96 | 90.52 |
TraesCS4B01G280600.1 | Wheat | nucleus | 77.93 | 78.01 |
EER92800 | Sorghum | nucleus, plastid | 59.94 | 60.63 |
Os03t0165266-00 | Rice | nucleus | 64.23 | 57.17 |
VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 36.61 | 51.4 |
VIT_03s0038g04290.t01 | Wine grape | nucleus | 10.88 | 47.06 |
Bra021841.1-P | Field mustard | cytosol | 36.61 | 45.81 |
KRH27453 | Soybean | cytosol | 41.42 | 44.85 |
AT2G16390.2 | Thale cress | nucleus | 40.38 | 43.32 |
TraesCS2B01G208700.1 | Wheat | cytosol | 41.11 | 42.9 |
Solyc01g109970.2.1 | Tomato | extracellular | 39.54 | 41.68 |
VIT_03s0038g00030.t01 | Wine grape | nucleus | 40.8 | 41.01 |
PGSC0003DMT400079488 | Potato | nucleus | 39.64 | 40.97 |
KRH20806 | Soybean | cytosol | 40.8 | 40.92 |
CDX89710 | Canola | nucleus | 36.92 | 40.86 |
GSMUA_Achr6P04530_001 | Banana | nucleus | 33.79 | 36.41 |
Bra000888.1-P | Field mustard | cytosol | 17.47 | 36.38 |
TraesCS3B01G251000.1 | Wheat | nucleus | 22.18 | 19.98 |
TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 6.28 | 17.91 |
TraesCS2B01G105400.1 | Wheat | nucleus | 23.33 | 17.78 |
TraesCS2B01G222000.1 | Wheat | plastid | 13.81 | 15.22 |
TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 20.5 | 13.13 |
TraesCS6B01G351900.1 | Wheat | nucleus | 12.24 | 11.66 |
TraesCS1B01G161400.5 | Wheat | nucleus | 17.05 | 10.27 |
TraesCS3B01G097000.1 | Wheat | nucleus | 12.34 | 9.24 |
TraesCS1B01G476500.1 | Wheat | mitochondrion | 13.08 | 6.04 |
Protein Annotations
MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF799 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
InterPro:SNF2_N | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2B01G164300 | EnsemblPlants:TraesCS2B01G164300.3 | TIGR:cd00046 | TIGR:cd00079 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:136619593..136624155
Molecular Weight (calculated)
107985.0 Da
IEP (calculated)
5.328
GRAVY (calculated)
-0.495
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSSCKRHK HDTGHDSLPG TQSPSSIISH TRSVRLRFLE RFDELKYGSA TEDYKAIERK KHQLISTLEK LQQVPIKLPC ASATLETSDA GLHGAAQSER
101: NISSDNIVDL DQYDVGDHTH GNMDSTEAQK TVILLDSDDE DMVKSFGDGN LSDSKQNADF TQDCMPAEQP CQDQDIIMRN DENINSEALV VDPGKHSMGI
201: DNEPKEIALF DGHDTSEPQQ LNKQGHYHIN IHNESRDEEK ETREGEGEDV QSKGHMENNN ISAVDSYEIS CEVIQSESME EGNYNHIDTI DNPVDELDDL
301: WKDMSVALAM SKTIGSDHSI VPSEKNSSEV VDDCHHDFVM KDDLGIVCRV CGLIQQRIEN IFELQWKKRN RSYRTYPQEP RNCNNLEATT NPSGDILQVA
401: PGTLSIHPQH SERMKPHQVE GFNFLIKNLA DENNPGGCIL AHAPGSGKTF MLISFVQSFL ARYPAGRPLI ILPKGILATW RTEFVRWQIK DMPIPLYDFY
501: SSKADSRSEQ LNVLNLWEEK RSILLLGYQQ FACIVSDQTY KAEAVMCQEK LLKVPSLVIL DEGHTPRNEQ TDLLNALGSI RTPRKVVLSG TLFQNHVKEV
601: FNILNLVRPK FLKTERSRGI VKRVLSKVDM LGKNARSRNI SDKFCDLVEE NLQKDANDKM RAMIIESLRE LTANVLHYYQ GELSEELPGL LDLTVFLKMS
701: TEQEEILRGL VGLGKFSKSA KCSAVSLHPC LKDIQNIKDK NRDIVVEKIG SIMRGIDIKV GAKAKFIYNL LCLSEAAGEK VLVFSRYVRF LIFLEMLVVR
801: EKGWVPDMHI FSMTGESTPD QRDKAVERFN QSPDAKVFFG SIKACGEGIS LVGASRVVIL DVHENPSVMR QAIGRAFRPG QSKMVYCYRL VAADSPEEED
901: HNTAFRKEWV SKMWFESNDL CGNDNFELAT VDVSESGDRF LDNEALRQDI KSLYKR
101: NISSDNIVDL DQYDVGDHTH GNMDSTEAQK TVILLDSDDE DMVKSFGDGN LSDSKQNADF TQDCMPAEQP CQDQDIIMRN DENINSEALV VDPGKHSMGI
201: DNEPKEIALF DGHDTSEPQQ LNKQGHYHIN IHNESRDEEK ETREGEGEDV QSKGHMENNN ISAVDSYEIS CEVIQSESME EGNYNHIDTI DNPVDELDDL
301: WKDMSVALAM SKTIGSDHSI VPSEKNSSEV VDDCHHDFVM KDDLGIVCRV CGLIQQRIEN IFELQWKKRN RSYRTYPQEP RNCNNLEATT NPSGDILQVA
401: PGTLSIHPQH SERMKPHQVE GFNFLIKNLA DENNPGGCIL AHAPGSGKTF MLISFVQSFL ARYPAGRPLI ILPKGILATW RTEFVRWQIK DMPIPLYDFY
501: SSKADSRSEQ LNVLNLWEEK RSILLLGYQQ FACIVSDQTY KAEAVMCQEK LLKVPSLVIL DEGHTPRNEQ TDLLNALGSI RTPRKVVLSG TLFQNHVKEV
601: FNILNLVRPK FLKTERSRGI VKRVLSKVDM LGKNARSRNI SDKFCDLVEE NLQKDANDKM RAMIIESLRE LTANVLHYYQ GELSEELPGL LDLTVFLKMS
701: TEQEEILRGL VGLGKFSKSA KCSAVSLHPC LKDIQNIKDK NRDIVVEKIG SIMRGIDIKV GAKAKFIYNL LCLSEAAGEK VLVFSRYVRF LIFLEMLVVR
801: EKGWVPDMHI FSMTGESTPD QRDKAVERFN QSPDAKVFFG SIKACGEGIS LVGASRVVIL DVHENPSVMR QAIGRAFRPG QSKMVYCYRL VAADSPEEED
901: HNTAFRKEWV SKMWFESNDL CGNDNFELAT VDVSESGDRF LDNEALRQDI KSLYKR
001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.