Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G245400.1 | Wheat | nucleus | 96.38 | 96.9 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 96.25 | 96.51 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 28.2 | 93.56 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 92.23 | 92.92 |
| Solyc08g077650.1.1 | Tomato | cytosol | 2.34 | 67.31 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 63.56 | 66.13 |
| OQU77943 | Sorghum | mitochondrion | 63.03 | 64.54 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 33.62 | 53.23 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 21.03 | 48.68 |
| Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 5.63 | 48.28 |
| PGSC0003DMT400033315 | Potato | nucleus | 4.69 | 48.28 |
| PGSC0003DMT400088837 | Potato | cytosol | 6.1 | 48.15 |
| Solyc08g077580.1.1 | Tomato | cytosol | 5.49 | 47.4 |
| Solyc03g061640.1.1 | Tomato | cytosol | 5.09 | 45.78 |
| CDX77430 | Canola | nucleus | 20.5 | 45.47 |
| Solyc01g068300.1.1 | Tomato | cytosol | 11.65 | 44.62 |
| Solyc08g077610.1.1 | Tomato | nucleus | 19.89 | 44.39 |
| Solyc04g054440.1.1 | Tomato | nucleus | 19.22 | 43.82 |
| CDY29038 | Canola | nucleus | 5.16 | 43.75 |
| CDY59589 | Canola | nucleus | 5.16 | 43.75 |
| Solyc01g068320.1.1 | Tomato | cytosol | 19.56 | 43.71 |
| PGSC0003DMT400017302 | Potato | nucleus | 18.02 | 43.18 |
| Solyc02g033050.1.1 | Tomato | nucleus | 18.08 | 42.93 |
| Solyc08g062000.1.1 | Tomato | cytosol | 11.19 | 42.71 |
| PGSC0003DMT400096321 | Potato | nucleus | 3.55 | 42.4 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 2.01 | 42.25 |
| PGSC0003DMT400090992 | Potato | mitochondrion | 6.9 | 42.04 |
| Solyc08g061410.1.1 | Tomato | cytosol | 12.26 | 41.69 |
| Solyc08g062060.1.1 | Tomato | nucleus | 2.95 | 41.51 |
| Solyc08g077690.2.1 | Tomato | nucleus | 19.89 | 40.08 |
| Solyc01g060460.1.1 | Tomato | nucleus | 20.16 | 39.55 |
| Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 6.36 | 39.42 |
| Solyc08g061370.1.1 | Tomato | cytosol | 4.55 | 39.08 |
| Solyc08g061340.1.1 | Tomato | cytosol | 5.69 | 38.12 |
| KRH39939 | Soybean | nucleus | 15.67 | 37.93 |
| PGSC0003DMT400085993 | Potato | cytosol | 4.22 | 37.5 |
| Solyc08g077600.1.1 | Tomato | cytosol | 9.65 | 36.64 |
| Solyc08g061390.1.1 | Tomato | cytosol | 6.03 | 36.29 |
| CDX93009 | Canola | nucleus | 23.31 | 35.88 |
| Solyc08g061990.1.1 | Tomato | mitochondrion | 9.18 | 35.58 |
| CDX94823 | Canola | nucleus | 23.11 | 35.42 |
| Solyc08g062070.1.1 | Tomato | cytosol | 3.15 | 35.34 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 24.98 | 35.16 |
| PGSC0003DMT400004673 | Potato | nucleus | 21.43 | 34.93 |
| Bra015035.1-P | Field mustard | nucleus | 24.38 | 34.93 |
| PGSC0003DMT400004629 | Potato | nucleus | 20.83 | 34.87 |
| CDY66441 | Canola | nucleus | 24.05 | 34.75 |
| Solyc08g077670.1.1 | Tomato | cytosol | 10.11 | 33.33 |
| Bra001944.1-P | Field mustard | nucleus | 23.78 | 33.3 |
| PGSC0003DMT400004672 | Potato | nucleus | 21.9 | 32.86 |
| PGSC0003DMT400085944 | Potato | cytosol | 5.16 | 32.77 |
| AT3G24340.1 | Thale cress | nucleus | 23.64 | 31.18 |
| KRH23851 | Soybean | mitochondrion, nucleus | 24.25 | 31.05 |
| KRH46527 | Soybean | nucleus | 23.71 | 30.84 |
| PGSC0003DMT400037430 | Potato | nucleus | 13.8 | 30.65 |
| PGSC0003DMT400017313 | Potato | nucleus | 23.64 | 29.29 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 23.58 | 28.25 |
| PGSC0003DMT400038789 | Potato | nucleus | 20.43 | 27.58 |
| CDY47279 | Canola | nucleus | 24.18 | 27.0 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 25.45 | 26.95 |
| CDY10115 | Canola | nucleus | 24.58 | 26.61 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 14.53 | 23.69 |
| Bra015430.1-P | Field mustard | nucleus | 25.12 | 23.69 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 13.19 | 20.63 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 13.13 | 20.5 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 15.94 | 18.98 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 4.22 | 18.81 |
| TraesCS2B01G222000.1 | Wheat | plastid | 8.17 | 14.07 |
| TraesCS6B01G351900.1 | Wheat | nucleus | 9.18 | 13.66 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 10.65 | 12.45 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 12.53 | 11.78 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 10.85 | 7.83 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF937 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1B01G256700 | EnsemblPlants:TraesCS1B01G256700.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:452311581..452317042
Molecular Weight (calculated)
166620.0 Da
IEP (calculated)
5.662
GRAVY (calculated)
-0.764
Length
1493 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRAARRRAR SGGGGTPATP STRARRRDDA GTIVIDLDDD GAAPAAAAAA SRRSSSSSSS SSAATMPVPL VGAVATRTRS RRLAMQPPAP EEAPRAKRRR
0101: KGATRADADG GGGSKGADSS KSETRPNRRG RPPRASVKSK EAEAEADAPA CGDWVEVSRG DGYDGGGRRG DDASGDDNGE SRADEACGIG QGSHEHHSAA
0201: SGNRINEHQG SGAVNGSNSC HVMNEVVVSG DAGGLKGRGG EGGGLGGGFH VDEEHMNEDD TTVGCGNREL PTADAMMDDE AAASEDDFGD YYDDEMMEER
0301: LVADLIRAYS NGGNLEASNG AYGNGGDLEE AEDEMGFTDD GDDDDFMHDA DECGMSEPIN DDAKAPINDD AKAGTQDPVD HKVVAGEVRC HEEEEEEDVI
0401: KDEVETKREG ATGFNQGRSH IEILDSDEEV KVLNDASKAS KRKPLPRKKE PVVPCVAWRT RSLWGLKQDR LSYNAYFEEL SDEPEEEDDS EVELDDEDDD
0501: SADDDNSASH DSEVELEEED AKKKAKEEEE AEMRKRKKEI ASSSAKIRAG PLPLYTNTGK RIQKATPHRC NNSKPRRRIQ THHRIDSSDD EIIDHTVADG
0601: FKWEVDKKPG IQPLNFDKDG SEGPVGNDIT QHQKQTHFTW DLERRKRLKL ETTTKERQLF ERHLDSDSSP SSSDQNKRHG DDSKTEREKK HLASKSGKSA
0701: KKSSRSGSKT LKRQSLLKLL MDKMSGDKDG GFSPFDQHPQ FDYNFKDPHP LVFSFGTENS TPADIPEQNA KENMLWGDFD FALESENIGT YYDDEHQGET
0801: NVLDLGLPSK TPCSRGKHEF IIDDQIGIRC KYCSLVNLEI RFVLPSMVSN YTEKTPWRNG SYLKEALMYH DLCEQAGSVD GQSQDFHLYG TVWDLIPGVI
0901: TSMYQHQREA FEFMWTNLVG DIRLDELKHG AKPDVVGGCV ICHAPGTGKT RLAIVFIQTY MKVFPDCRPV IIAPRGMLFA WEEEFKKWDV NVPFHIMNTT
1001: DFSGKEDRDI CRLIKKEHRT EKLTRLVKLL SWNKGHGILG ISYGLYMKLT SEKKSGCTEG NKVRSILLEN PGLLVLDEGH TPRNERSIMW KTLGKVKTEK
1101: RIILSGTPFQ NNFLELYNIL CLVRPRFGEM FLTEKKVGRR HYVSKKRQDK FSDKYEKGVW ASLTSNVTDD NAEKVRSILK PFVHIHNGTI LRTLPGLRES
1201: VIVLKPPPLQ KSIIRKVENI GSGNNFEHEY VISLASTHPS LVTAINMSEE EASLIDKPML ERLRSNPYEG VKTRFVIEVV RLCEALKEKV LIFSQFIQPL
1301: ELIKEHLSKL FKWRVGKEIL QMDGKIQPRY RQTSIEVFNN PDSDAKVLLA STRACCEGIS LTGASRVVLL DVVWNPAVGR QAISRAFRIG QKKFVYTYNL
1401: ITYGTGEGDK YDRQAEKDHL SKLVFSQEDE FNNVRNMLSK AEMDHCSKLI SKDKVLEEMT SHDQLKGMFL KIHYPPTESN MVFTYNQIAP ELS
0101: KGATRADADG GGGSKGADSS KSETRPNRRG RPPRASVKSK EAEAEADAPA CGDWVEVSRG DGYDGGGRRG DDASGDDNGE SRADEACGIG QGSHEHHSAA
0201: SGNRINEHQG SGAVNGSNSC HVMNEVVVSG DAGGLKGRGG EGGGLGGGFH VDEEHMNEDD TTVGCGNREL PTADAMMDDE AAASEDDFGD YYDDEMMEER
0301: LVADLIRAYS NGGNLEASNG AYGNGGDLEE AEDEMGFTDD GDDDDFMHDA DECGMSEPIN DDAKAPINDD AKAGTQDPVD HKVVAGEVRC HEEEEEEDVI
0401: KDEVETKREG ATGFNQGRSH IEILDSDEEV KVLNDASKAS KRKPLPRKKE PVVPCVAWRT RSLWGLKQDR LSYNAYFEEL SDEPEEEDDS EVELDDEDDD
0501: SADDDNSASH DSEVELEEED AKKKAKEEEE AEMRKRKKEI ASSSAKIRAG PLPLYTNTGK RIQKATPHRC NNSKPRRRIQ THHRIDSSDD EIIDHTVADG
0601: FKWEVDKKPG IQPLNFDKDG SEGPVGNDIT QHQKQTHFTW DLERRKRLKL ETTTKERQLF ERHLDSDSSP SSSDQNKRHG DDSKTEREKK HLASKSGKSA
0701: KKSSRSGSKT LKRQSLLKLL MDKMSGDKDG GFSPFDQHPQ FDYNFKDPHP LVFSFGTENS TPADIPEQNA KENMLWGDFD FALESENIGT YYDDEHQGET
0801: NVLDLGLPSK TPCSRGKHEF IIDDQIGIRC KYCSLVNLEI RFVLPSMVSN YTEKTPWRNG SYLKEALMYH DLCEQAGSVD GQSQDFHLYG TVWDLIPGVI
0901: TSMYQHQREA FEFMWTNLVG DIRLDELKHG AKPDVVGGCV ICHAPGTGKT RLAIVFIQTY MKVFPDCRPV IIAPRGMLFA WEEEFKKWDV NVPFHIMNTT
1001: DFSGKEDRDI CRLIKKEHRT EKLTRLVKLL SWNKGHGILG ISYGLYMKLT SEKKSGCTEG NKVRSILLEN PGLLVLDEGH TPRNERSIMW KTLGKVKTEK
1101: RIILSGTPFQ NNFLELYNIL CLVRPRFGEM FLTEKKVGRR HYVSKKRQDK FSDKYEKGVW ASLTSNVTDD NAEKVRSILK PFVHIHNGTI LRTLPGLRES
1201: VIVLKPPPLQ KSIIRKVENI GSGNNFEHEY VISLASTHPS LVTAINMSEE EASLIDKPML ERLRSNPYEG VKTRFVIEVV RLCEALKEKV LIFSQFIQPL
1301: ELIKEHLSKL FKWRVGKEIL QMDGKIQPRY RQTSIEVFNN PDSDAKVLLA STRACCEGIS LTGASRVVLL DVVWNPAVGR QAISRAFRIG QKKFVYTYNL
1401: ITYGTGEGDK YDRQAEKDHL SKLVFSQEDE FNNVRNMLSK AEMDHCSKLI SKDKVLEEMT SHDQLKGMFL KIHYPPTESN MVFTYNQIAP ELS
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.