Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0392400-01 | Rice | cytosol, nucleus | 28.14 | 92.67 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 92.92 | 92.23 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 91.9 | 91.47 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 91.63 | 91.45 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 63.02 | 65.09 |
| OQU77943 | Sorghum | mitochondrion | 62.75 | 63.79 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 33.81 | 53.13 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 12.62 | 52.97 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 21.26 | 48.84 |
| CDX77430 | Canola | nucleus | 20.65 | 45.47 |
| CDY59589 | Canola | nucleus | 5.2 | 43.75 |
| CDY29038 | Canola | nucleus | 5.2 | 43.75 |
| KRH39939 | Soybean | nucleus | 15.92 | 38.25 |
| CDX93009 | Canola | nucleus | 23.41 | 35.77 |
| CDX94823 | Canola | nucleus | 23.28 | 35.42 |
| Bra015035.1-P | Field mustard | nucleus | 24.43 | 34.74 |
| CDY66441 | Canola | nucleus | 24.09 | 34.56 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 8.16 | 34.08 |
| Bra001944.1-P | Field mustard | nucleus | 23.82 | 33.11 |
| KRH23851 | Soybean | mitochondrion, nucleus | 24.56 | 31.22 |
| KRH46527 | Soybean | nucleus | 23.89 | 30.84 |
| AT3G24340.1 | Thale cress | nucleus | 23.35 | 30.57 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 25.64 | 29.87 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 23.89 | 28.41 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 6.07 | 27.52 |
| CDY47279 | Canola | nucleus | 24.36 | 27.0 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 25.37 | 26.67 |
| CDY10115 | Canola | nucleus | 24.49 | 26.32 |
| Bra015430.1-P | Field mustard | nucleus | 25.17 | 23.56 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 14.91 | 22.67 |
| HORVU5Hr1G085320.1 | Barley | plastid | 14.78 | 22.46 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 3.37 | 20.83 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 13.56 | 19.59 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 16.6 | 19.46 |
| HORVU7Hr1G119270.3 | Barley | nucleus | 3.51 | 18.57 |
| HORVU1Hr1G071540.2 | Barley | nucleus | 3.37 | 18.32 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 2.56 | 16.89 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 3.44 | 15.94 |
| HORVU6Hr1G078680.2 | Barley | nucleus | 9.11 | 13.82 |
| HORVU2Hr1G037590.4 | Barley | plastid | 8.16 | 13.8 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 10.53 | 12.79 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 12.69 | 12.63 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 8.7 | 11.65 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.61 | 8.33 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 10.73 | 7.68 |
| HORVU3Hr1G014630.1 | Barley | cytosol, nucleus, plastid | 0.27 | 1.32 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A287FX97 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:HORVU1Hr1G062970 | EnsemblPlants:HORVU1Hr1G062970.3 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF937 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000B4746DD | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:+:452221956..452229980
Molecular Weight (calculated)
165700.0 Da
IEP (calculated)
5.838
GRAVY (calculated)
-0.780
Length
1482 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRSARRRAR GGGGSPPAPS TRARRRGAAE AIVIDLDAAD DGAAPAAAAA AASRRSSSSS AATTPVPLVG SVATRTRSRR LTMQPPAPEE APRAKRRRKG
0101: TTGADADGGG GSKGARPSKS ETRPNRRGRP PRASGKSKEA EAEAEADAPA CGDWVEVPRC DGGGRRGDDA SGDDNGESRA DEACGIGQGS HEHRSAASGD
0201: RINEHRRSGA VNGSNSSHRG SEAVSGDADR GRLGAGFHGD EEHMNQQDTV DCGNRELPSE GDAMGGEVAA SEDDYEDDYD DEMLEERLVA DLIRTYSNGD
0301: NLEASNGAYG NGGDLEESED EMGFTDDGDD DDFMHDADEC GMSEPINDDA KAPINDDAKA GAQDPVDHKV VAGEVRCHEE DKEEDVIKDE VETKQEGATG
0401: FSQGKSHIEI LDSDEEVKVL NDASKASKRK PLLRKKEPVV PCVAWRTRSL WGLKQDRMSY NAYFEELSDE PEEEDDSEVE LDDEDGDSDD DDNSASHDSE
0501: VELEEEEAKM KAKEEEEAEM RKRKKEMASS SVKVRAGHLP LYMNNNRGKR IQKATPNRCN NSKPGRRIQT HHRTDSSDDE IGDHTVADGF KWEVHKKPGI
0601: QPLNFDKDGS EGPVGNDITQ HQKQSYFTWD LERRKRLKLE TTTKERQLFE RHLDSDSSPS SSDQNKRHGD DSKIGREKKH LSSKSGKSAK KSSRLGAKTL
0701: KRQSLLKLLM DKMCSDKDGG FSPFEQHPQF DYNFKDPHPL VFSFGTETST PADIPEQSAK ENMLWGDFDF ALESENIGTY YDDEHQGESN VLDLGLPSKT
0801: PCSRGKHEFI IDDQIGIRCK YCSLVNLEIR FVLPSMVSNY AEKTPWRNGS YLKEALMYHD LCEQAGSVDG QSQDLHLYGT VWDLIPGVIT SMYQHQREAF
0901: EFMWTNLVGD IRLDELKHGA KPDVVGGCVI CHAPGTGKTR LAIVFIQTYM KVFPDCRPVI IAPRGMLFAW EEEFKKWDVN VPFHIMNTTD YSGKEDRDIC
1001: RLIKKEHRTE KLTRLVKLLS WNKGHGILGI SYGLYMKLTS EKKSGCTEGS KVRSILLENP GLLVLDEGHT PRNERSIMWK TLGKVKTEKR IILSGTPFQN
1101: NFLELYNILC LVRPRFGEMF LTEKKVGRRH YVSKKRQDKF SDKYEKGVWA SLTSNVTDDN AEKVRSILKP FVHIHNGTIL RTLPGLRESV IVLKPPPLQK
1201: SIIRKVENIG SGNNFEHEYV ISLASTHPSL VTAINMSEEE ASLIDKPMLE RLRPNPYEGV KTRFVIEVVR LCEALKEKVL IFSQFIQPLE LIKEHLCKLF
1301: KWRVGKEILQ MDGKIQPRYR QTSIEVFNNP DSDAKVLLAS TRACCEGISL TGASRVVLLD VVWNPAVGRQ AISRAFRIGQ KKFVYTYNLI TYGTGEGDKY
1401: DRQAEKDHLS KLVFSQEDEF NNVRNMLSKA EMDHCSKLIS QDKVLEEMSS HDQLKSMFLK IHYPPTESNM VFTYNQIAPE LS
0101: TTGADADGGG GSKGARPSKS ETRPNRRGRP PRASGKSKEA EAEAEADAPA CGDWVEVPRC DGGGRRGDDA SGDDNGESRA DEACGIGQGS HEHRSAASGD
0201: RINEHRRSGA VNGSNSSHRG SEAVSGDADR GRLGAGFHGD EEHMNQQDTV DCGNRELPSE GDAMGGEVAA SEDDYEDDYD DEMLEERLVA DLIRTYSNGD
0301: NLEASNGAYG NGGDLEESED EMGFTDDGDD DDFMHDADEC GMSEPINDDA KAPINDDAKA GAQDPVDHKV VAGEVRCHEE DKEEDVIKDE VETKQEGATG
0401: FSQGKSHIEI LDSDEEVKVL NDASKASKRK PLLRKKEPVV PCVAWRTRSL WGLKQDRMSY NAYFEELSDE PEEEDDSEVE LDDEDGDSDD DDNSASHDSE
0501: VELEEEEAKM KAKEEEEAEM RKRKKEMASS SVKVRAGHLP LYMNNNRGKR IQKATPNRCN NSKPGRRIQT HHRTDSSDDE IGDHTVADGF KWEVHKKPGI
0601: QPLNFDKDGS EGPVGNDITQ HQKQSYFTWD LERRKRLKLE TTTKERQLFE RHLDSDSSPS SSDQNKRHGD DSKIGREKKH LSSKSGKSAK KSSRLGAKTL
0701: KRQSLLKLLM DKMCSDKDGG FSPFEQHPQF DYNFKDPHPL VFSFGTETST PADIPEQSAK ENMLWGDFDF ALESENIGTY YDDEHQGESN VLDLGLPSKT
0801: PCSRGKHEFI IDDQIGIRCK YCSLVNLEIR FVLPSMVSNY AEKTPWRNGS YLKEALMYHD LCEQAGSVDG QSQDLHLYGT VWDLIPGVIT SMYQHQREAF
0901: EFMWTNLVGD IRLDELKHGA KPDVVGGCVI CHAPGTGKTR LAIVFIQTYM KVFPDCRPVI IAPRGMLFAW EEEFKKWDVN VPFHIMNTTD YSGKEDRDIC
1001: RLIKKEHRTE KLTRLVKLLS WNKGHGILGI SYGLYMKLTS EKKSGCTEGS KVRSILLENP GLLVLDEGHT PRNERSIMWK TLGKVKTEKR IILSGTPFQN
1101: NFLELYNILC LVRPRFGEMF LTEKKVGRRH YVSKKRQDKF SDKYEKGVWA SLTSNVTDDN AEKVRSILKP FVHIHNGTIL RTLPGLRESV IVLKPPPLQK
1201: SIIRKVENIG SGNNFEHEYV ISLASTHPSL VTAINMSEEE ASLIDKPMLE RLRPNPYEGV KTRFVIEVVR LCEALKEKVL IFSQFIQPLE LIKEHLCKLF
1301: KWRVGKEILQ MDGKIQPRYR QTSIEVFNNP DSDAKVLLAS TRACCEGISL TGASRVVLLD VVWNPAVGRQ AISRAFRIGQ KKFVYTYNLI TYGTGEGDKY
1401: DRQAEKDHLS KLVFSQEDEF NNVRNMLSKA EMDHCSKLIS QDKVLEEMSS HDQLKSMFLK IHYPPTESNM VFTYNQIAPE LS
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.