Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10115 | Canola | nucleus | 89.15 | 86.44 |
| Bra015430.1-P | Field mustard | nucleus | 97.01 | 81.93 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 68.59 | 65.04 |
| CDX77430 | Canola | nucleus | 28.05 | 55.72 |
| CDY59589 | Canola | nucleus | 6.88 | 52.27 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 25.13 | 52.09 |
| CDY29038 | Canola | nucleus | 6.81 | 51.7 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 12.42 | 47.03 |
| KRH39939 | Soybean | nucleus | 21.62 | 46.84 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 15.71 | 46.67 |
| CDX93009 | Canola | nucleus | 31.34 | 43.2 |
| CDX94823 | Canola | nucleus | 31.34 | 43.02 |
| CDY66441 | Canola | nucleus | 32.83 | 42.5 |
| Os02t0650800-00 | Rice | cytosol | 24.61 | 35.11 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 24.23 | 34.36 |
| KRH23851 | Soybean | mitochondrion, nucleus | 29.47 | 33.79 |
| KRH46527 | Soybean | nucleus | 28.57 | 33.28 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 25.36 | 31.95 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 29.77 | 31.94 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 25.21 | 31.91 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 24.91 | 31.5 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 7.55 | 28.45 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 24.23 | 28.45 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 22.89 | 28.18 |
| CDY67491 | Canola | cytosol | 3.22 | 27.22 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 25.58 | 26.93 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 25.43 | 26.73 |
| KXG31163 | Sorghum | nucleus | 25.13 | 26.29 |
| Zm00001d051324_P001 | Maize | nucleus | 25.36 | 25.36 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 26.78 | 24.95 |
| CDY37734 | Canola | nucleus | 13.91 | 24.6 |
| OQU77943 | Sorghum | mitochondrion | 26.78 | 24.55 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 27.0 | 24.36 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 27.08 | 24.31 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 26.93 | 24.24 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 27.0 | 24.18 |
| CDY23754 | Canola | cytosol | 13.91 | 24.12 |
| CDX89710 | Canola | nucleus | 15.48 | 23.96 |
| CDY16534 | Canola | nucleus | 6.96 | 21.33 |
| CDX78226 | Canola | cytosol | 2.77 | 20.0 |
| CDX92463 | Canola | nucleus | 18.92 | 20.0 |
| CDY56857 | Canola | cytosol | 18.62 | 19.68 |
| CDX92308 | Canola | nucleus | 9.95 | 14.6 |
| CDX99258 | Canola | nucleus | 9.8 | 14.44 |
| CDX92882 | Canola | nucleus | 10.1 | 11.96 |
| CDY51705 | Canola | nucleus | 10.25 | 11.82 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.5 | 11.08 |
| CDY43772 | Canola | mitochondrion | 9.57 | 11.03 |
| CDX95047 | Canola | nucleus | 11.82 | 10.68 |
| CDX93550 | Canola | nucleus | 11.89 | 10.65 |
| CDY22674 | Canola | nucleus | 5.91 | 10.26 |
| CDY37413 | Canola | mitochondrion, nucleus | 9.42 | 7.87 |
| CDY32510 | Canola | mitochondrion, nucleus | 9.42 | 7.85 |
| CDX73492 | Canola | mitochondrion | 11.14 | 7.16 |
| CDX78225 | Canola | mitochondrion | 8.53 | 5.65 |
| CDY06321 | Canola | nucleus | 1.57 | 3.61 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.82 | 2.81 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.22 | 2.78 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078ID49 | UniProt:A0A078ID49 | EnsemblPlants:CDY47279 |
| ProteinID:CDY47279 | ProteinID:CDY47279.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00087087001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF858 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EE618F | SEG:seg | : | : | : | : |
Description
BnaA10g03670DBnaA10g03670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID49]
Coordinates
chrLK032705:+:89751..94702
Molecular Weight (calculated)
150128.0 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.671
Length
1337 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDWIGSRIKF RNKERLEEVK KMKPAEEEAH VSSRRKRKRK RRHRDHDSDL EDITETYHNN NLSTDVTQSK SSGSVRRRRR RKDHDSDIED ITEAYHKDHD
0101: SDLVDVTETC NTDHDSDLVD SSIKEKLSEE IMDVDVVKPV PKLSDGIMDA DVDVVKSVPS SSGSSNKGNE SLDSDVVKSV TRSSGSEENT CVKDKCSSEV
0201: RGMEAAKPVP AEIEIISDSE SETKHSAKKK LSFAECSRVL DSSSESSEEE GASEANNNAK DDVTVESLSS SSSSSSSSSS ASALSLSSSS SSSSSEDEVS
0301: SKEVVGESDD DDCRKASSPI RKVSEVRRKP LGRYKRSAPS SITPRKQLLK IRKLNHPEEE EEERLQAKPK EVTKQNSSVV FTCVHCEKEN TGIFDSDSFC
0401: FRPHAITRGE EDADDDDDLN KHDYVPINTE KSPEKPSTSR PETENPKEVI TPARLPTSRP ETVKAKEIQA PEMPSRQFSL KTSMPVTPAE GLSTPALVNE
0501: TVDNESASSL ISGDESGYES EPSLKEKEAA KSNNNNSGWR MLDGSRKEVD LFRLLVNSVR ENDRLGEEEE DDILVSSPEE EQPEEQDERK YDDDGLLIIR
0601: PPPLVEMFGM VEPAPPVVSE AQIEEDTMWE EVAFYTNANE VDLQLHSEAK ISADDSPGAA CRQGNHELCL DLEIGLKCIH CCFVLREIRG LDVSEWGERN
0701: TSGRRKNDRS EEEENSNFIG NLEFEANSNN NLKEGSESTQ GTVWDKIPGV KSQMYPHQQE GFEFIWRNLA GTIMLNELQD FENSEETGGC IMSHAPGTGK
0801: TRLTIIFLQS YLECFPNCKP VIIAPASLLL TWAEEFKKWN ISIPFHNLSS LEFTGRENSA ASKLLMQKNS SARSNNEIRM VKIYSWIKSK SILGISYNLY
0901: EKLAGVKDED RKTKGKPDKE LEDIREILMD VPGLLVLDEA HTPRNQRSCI WKTLSKVETQ KRILLSGTPF QNNFLELGNV LGLARPKYLE RLMSTLKKSG
1001: MTVTKRGKKA LGDKINNRGI EELKAVMLPF VHVHKGSILQ KSLPGLRECV VVLNPPDLQR KVLESIEVTH NQKTKNVFET EHKLSLVSVH PSLVSHCKLT
1101: GKESLTINEA LLAQLKKVRL DPNQSVKTRF LMEFIKLCVV IKEKVLVFSQ YIDPLKLIMK HLVNWFKWTE GEEVLYMHGK LEQKQRQTLI NEFNDPKSKA
1201: KVLLASTKAC SEGINLVGAS RVILLDVVWN PAVERQAISR AYRIGQKRIV YTYHLVAKGT PEGTKYCKQA QKDRISELVF ACSSRPDKGK EKIAEAVTED
1301: KVLDTMVKHL KLGDMFDNLI VQPKEADLVE GFSILMP
0101: SDLVDVTETC NTDHDSDLVD SSIKEKLSEE IMDVDVVKPV PKLSDGIMDA DVDVVKSVPS SSGSSNKGNE SLDSDVVKSV TRSSGSEENT CVKDKCSSEV
0201: RGMEAAKPVP AEIEIISDSE SETKHSAKKK LSFAECSRVL DSSSESSEEE GASEANNNAK DDVTVESLSS SSSSSSSSSS ASALSLSSSS SSSSSEDEVS
0301: SKEVVGESDD DDCRKASSPI RKVSEVRRKP LGRYKRSAPS SITPRKQLLK IRKLNHPEEE EEERLQAKPK EVTKQNSSVV FTCVHCEKEN TGIFDSDSFC
0401: FRPHAITRGE EDADDDDDLN KHDYVPINTE KSPEKPSTSR PETENPKEVI TPARLPTSRP ETVKAKEIQA PEMPSRQFSL KTSMPVTPAE GLSTPALVNE
0501: TVDNESASSL ISGDESGYES EPSLKEKEAA KSNNNNSGWR MLDGSRKEVD LFRLLVNSVR ENDRLGEEEE DDILVSSPEE EQPEEQDERK YDDDGLLIIR
0601: PPPLVEMFGM VEPAPPVVSE AQIEEDTMWE EVAFYTNANE VDLQLHSEAK ISADDSPGAA CRQGNHELCL DLEIGLKCIH CCFVLREIRG LDVSEWGERN
0701: TSGRRKNDRS EEEENSNFIG NLEFEANSNN NLKEGSESTQ GTVWDKIPGV KSQMYPHQQE GFEFIWRNLA GTIMLNELQD FENSEETGGC IMSHAPGTGK
0801: TRLTIIFLQS YLECFPNCKP VIIAPASLLL TWAEEFKKWN ISIPFHNLSS LEFTGRENSA ASKLLMQKNS SARSNNEIRM VKIYSWIKSK SILGISYNLY
0901: EKLAGVKDED RKTKGKPDKE LEDIREILMD VPGLLVLDEA HTPRNQRSCI WKTLSKVETQ KRILLSGTPF QNNFLELGNV LGLARPKYLE RLMSTLKKSG
1001: MTVTKRGKKA LGDKINNRGI EELKAVMLPF VHVHKGSILQ KSLPGLRECV VVLNPPDLQR KVLESIEVTH NQKTKNVFET EHKLSLVSVH PSLVSHCKLT
1101: GKESLTINEA LLAQLKKVRL DPNQSVKTRF LMEFIKLCVV IKEKVLVFSQ YIDPLKLIMK HLVNWFKWTE GEEVLYMHGK LEQKQRQTLI NEFNDPKSKA
1201: KVLLASTKAC SEGINLVGAS RVILLDVVWN PAVERQAISR AYRIGQKRIV YTYHLVAKGT PEGTKYCKQA QKDRISELVF ACSSRPDKGK EKIAEAVTED
1301: KVLDTMVKHL KLGDMFDNLI VQPKEADLVE GFSILMP
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.