Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051324_P001 | Maize | nucleus | 79.58 | 76.07 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 18.15 | 65.72 |
| Solyc08g077650.1.1 | Tomato | cytosol | 2.66 | 65.38 |
| Os02t0650800-00 | Rice | cytosol | 42.02 | 57.31 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 41.0 | 49.62 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 41.16 | 49.58 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 40.85 | 49.39 |
| PGSC0003DMT400033315 | Potato | nucleus | 5.24 | 46.21 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 12.75 | 45.92 |
| Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.1 | 44.83 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 39.67 | 44.51 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 37.79 | 44.48 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 22.07 | 43.72 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 43.51 | 43.71 |
| CDY29038 | Canola | nucleus | 5.95 | 43.18 |
| CDY59589 | Canola | nucleus | 5.95 | 43.18 |
| CDX77430 | Canola | nucleus | 22.46 | 42.64 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 42.33 | 42.6 |
| Solyc01g068300.1.1 | Tomato | cytosol | 12.99 | 42.56 |
| PGSC0003DMT400096321 | Potato | nucleus | 4.15 | 42.4 |
| Solyc08g061370.1.1 | Tomato | cytosol | 5.71 | 41.95 |
| Solyc08g077580.1.1 | Tomato | cytosol | 5.63 | 41.62 |
| Solyc03g061640.1.1 | Tomato | cytosol | 5.4 | 41.57 |
| Solyc04g054440.1.1 | Tomato | nucleus | 21.28 | 41.53 |
| Solyc01g068320.1.1 | Tomato | cytosol | 21.67 | 41.47 |
| PGSC0003DMT400088837 | Potato | cytosol | 6.03 | 40.74 |
| PGSC0003DMT400017302 | Potato | nucleus | 19.64 | 40.29 |
| Solyc08g077610.1.1 | Tomato | nucleus | 20.81 | 39.76 |
| Solyc08g062060.1.1 | Tomato | nucleus | 3.29 | 39.62 |
| Solyc08g061410.1.1 | Tomato | cytosol | 13.38 | 38.95 |
| Solyc02g033050.1.1 | Tomato | nucleus | 19.17 | 38.95 |
| Solyc08g062000.1.1 | Tomato | cytosol | 11.89 | 38.87 |
| Solyc01g060460.1.1 | Tomato | nucleus | 22.93 | 38.5 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 2.11 | 38.03 |
| KRH39939 | Soybean | nucleus | 18.23 | 37.76 |
| Solyc08g077690.2.1 | Tomato | nucleus | 21.83 | 37.65 |
| Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 6.73 | 35.68 |
| PGSC0003DMT400090992 | Potato | mitochondrion | 6.81 | 35.51 |
| Solyc08g077600.1.1 | Tomato | cytosol | 10.88 | 35.37 |
| PGSC0003DMT400004629 | Potato | nucleus | 23.79 | 34.08 |
| Solyc08g061990.1.1 | Tomato | mitochondrion | 10.25 | 34.03 |
| Solyc08g061390.1.1 | Tomato | cytosol | 6.57 | 33.87 |
| Solyc08g061340.1.1 | Tomato | cytosol | 5.71 | 32.74 |
| PGSC0003DMT400004673 | Potato | nucleus | 23.32 | 32.53 |
| CDX93009 | Canola | nucleus | 24.65 | 32.47 |
| Solyc08g077670.1.1 | Tomato | cytosol | 11.35 | 32.01 |
| CDX94823 | Canola | nucleus | 24.1 | 31.62 |
| PGSC0003DMT400085993 | Potato | cytosol | 4.15 | 31.55 |
| PGSC0003DMT400085944 | Potato | cytosol | 5.79 | 31.49 |
| CDY66441 | Canola | nucleus | 25.43 | 31.46 |
| PGSC0003DMT400004672 | Potato | nucleus | 24.33 | 31.26 |
| Bra015035.1-P | Field mustard | nucleus | 25.27 | 31.0 |
| Solyc08g062070.1.1 | Tomato | cytosol | 3.21 | 30.83 |
| Bra001944.1-P | Field mustard | nucleus | 25.27 | 30.3 |
| AT3G24340.1 | Thale cress | nucleus | 25.74 | 29.06 |
| KRH23851 | Soybean | mitochondrion, nucleus | 26.13 | 28.64 |
| PGSC0003DMT400037430 | Potato | nucleus | 14.79 | 28.12 |
| PGSC0003DMT400017313 | Potato | nucleus | 25.98 | 27.55 |
| KRH46527 | Soybean | nucleus | 24.73 | 27.53 |
| OQU77943 | Sorghum | mitochondrion | 31.22 | 27.37 |
| PGSC0003DMT400038789 | Potato | nucleus | 22.61 | 26.13 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 25.2 | 25.84 |
| CDY47279 | Canola | nucleus | 26.29 | 25.13 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 27.15 | 24.61 |
| CDY10115 | Canola | nucleus | 26.45 | 24.51 |
| KXG24379 | Sorghum | cytosol | 17.84 | 23.51 |
| EER92800 | Sorghum | nucleus, plastid | 16.51 | 22.33 |
| Bra015430.1-P | Field mustard | nucleus | 27.39 | 22.11 |
| KXG37026 | Sorghum | nucleus | 19.25 | 20.0 |
| EES07568 | Sorghum | nucleus | 10.02 | 13.2 |
| KXG27526 | Sorghum | cytosol | 10.56 | 12.86 |
| EER91354 | Sorghum | plastid | 8.84 | 12.73 |
| EES02658 | Sorghum | nucleus | 11.66 | 12.33 |
| KXG38419 | Sorghum | nucleus | 13.07 | 11.26 |
| KXG22701 | Sorghum | mitochondrion | 10.95 | 6.84 |
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 0.86 | 6.29 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.23 | 2.78 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A194YSE6 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KXG31163 | ProteinID:KXG31163 | ProteinID:KXG31163.2 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF858 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3004G299200 | SUPFAM:SSF52540 |
| UniParc:UPI000B4243A3 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:63828716..63833862
Molecular Weight (calculated)
142969.0 Da
IEP (calculated)
5.857
GRAVY (calculated)
-0.774
Length
1278 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIEESGRRVR PVKEEALDDL DCDWVRSAEA KRALVAVLPP GSSHAKRKRK RASSGRAKPD KRADGGVHAL DRNSSASGAG HPTAWMSDDA RSSRGVKSRE
0101: SSRGVAGDRP GSAKKALVSS EESRGAPGKA RSGGGARRER STSVAPANWI GTSIGSRIRS RSRKQGTGQY SARVSSEDTG EDEVQEQKQK RVEDVESMDV
0201: DDDDDNNTNE AGNGIQKESE QDEALEGRSR QDSHALIDNE EEVGEKELSE EEEDDNQEES HSMYDGEGEQ EEDASEEVEQ EMDETGEEDE KELDGTGEED
0301: EQELDGAGKA QPVTPSNTIA GSSMRSGGDD TRVFRRRVFE GICLPQKPRK TVGKGIGART RSQRKCKDKK LLRRGTFSKP YNIDIPDSTS DSEEDIEPPA
0401: PQQGLLSSSE EGNITFGKRK HRRAIKNRRR KRPSTSSDEE YRVYARDGKD RPFRRLKKGL SKLQAGKEGC GRYVGSNPGH AKYNGPNGEN QSNEQDGIFF
0501: KRTAHKIRMK KHGPVAKAAY DELLNSLFSG WEDHINDPDH AAAGNSLPLV FSFGDEDAEE NIENDKYQED LWRECDIAFE SMDIGNGSEE DGLEIPPVEV
0601: TSCNNGQHEF IIDEQIGVRC KHCNVVDIEI RHVLPTLGKF SAERESAIDP ELDKMLKEML SVFEQNDVLV SNGHELPCNF GGHKAGSVWD LIPGVKETMF
0701: PHQQDAFEFL WTKLAGGTTI EQLKQTVKSD VGGGCVISHA PGTGKTRLAI TFVQSYLEVF PRCRPVIIAP RGMLATWEKE FRKWKVKLPF HVLNSTEINW
0801: SEDKTIQEQV AKNGTFHRRL LTDKMDQNYR RLVKLGSWMN GTSIIGLSYS LFRKLANHEG MDGDKVRKLL LEKPGLLVLD EGHTPRNKKS LIWKVLERVS
0901: TEKRIILSGT LFQNNFEELK NTLRLVRTKE ADGPKEADAV HLETDEGKDF WSSLRLNDIT EADINEVRKK LDPIVHIHSG KFLQKSLPGL GESVVILNPL
1001: PYQKEVIATM EKTVATTGLD EEYKISIASI HPSLLASAKL SEQEESILDI PKLESLRSRP SEGVKTRFVL EIVRLCEALN ERVLVFSQYL GPLSLIMEQL
1101: KAKFNWAEGK EILLMSGKVP VKNRQTMMEV FNDMKSKAKV MLASTKACCE GITLIGASRV VLLDVVWNPS VGRQAIGRAY RIGQEKIVYT YNLIAQGTRE
1201: KSKYDTQAKK EHMSKLLFSK EPEHGECNLP PELTFNDRVL EEMTAREDLK ELFVKIYVDN QTDGSRGEME KNNTCPQD
0101: SSRGVAGDRP GSAKKALVSS EESRGAPGKA RSGGGARRER STSVAPANWI GTSIGSRIRS RSRKQGTGQY SARVSSEDTG EDEVQEQKQK RVEDVESMDV
0201: DDDDDNNTNE AGNGIQKESE QDEALEGRSR QDSHALIDNE EEVGEKELSE EEEDDNQEES HSMYDGEGEQ EEDASEEVEQ EMDETGEEDE KELDGTGEED
0301: EQELDGAGKA QPVTPSNTIA GSSMRSGGDD TRVFRRRVFE GICLPQKPRK TVGKGIGART RSQRKCKDKK LLRRGTFSKP YNIDIPDSTS DSEEDIEPPA
0401: PQQGLLSSSE EGNITFGKRK HRRAIKNRRR KRPSTSSDEE YRVYARDGKD RPFRRLKKGL SKLQAGKEGC GRYVGSNPGH AKYNGPNGEN QSNEQDGIFF
0501: KRTAHKIRMK KHGPVAKAAY DELLNSLFSG WEDHINDPDH AAAGNSLPLV FSFGDEDAEE NIENDKYQED LWRECDIAFE SMDIGNGSEE DGLEIPPVEV
0601: TSCNNGQHEF IIDEQIGVRC KHCNVVDIEI RHVLPTLGKF SAERESAIDP ELDKMLKEML SVFEQNDVLV SNGHELPCNF GGHKAGSVWD LIPGVKETMF
0701: PHQQDAFEFL WTKLAGGTTI EQLKQTVKSD VGGGCVISHA PGTGKTRLAI TFVQSYLEVF PRCRPVIIAP RGMLATWEKE FRKWKVKLPF HVLNSTEINW
0801: SEDKTIQEQV AKNGTFHRRL LTDKMDQNYR RLVKLGSWMN GTSIIGLSYS LFRKLANHEG MDGDKVRKLL LEKPGLLVLD EGHTPRNKKS LIWKVLERVS
0901: TEKRIILSGT LFQNNFEELK NTLRLVRTKE ADGPKEADAV HLETDEGKDF WSSLRLNDIT EADINEVRKK LDPIVHIHSG KFLQKSLPGL GESVVILNPL
1001: PYQKEVIATM EKTVATTGLD EEYKISIASI HPSLLASAKL SEQEESILDI PKLESLRSRP SEGVKTRFVL EIVRLCEALN ERVLVFSQYL GPLSLIMEQL
1101: KAKFNWAEGK EILLMSGKVP VKNRQTMMEV FNDMKSKAKV MLASTKACCE GITLIGASRV VLLDVVWNPS VGRQAIGRAY RIGQEKIVYT YNLIAQGTRE
1201: KSKYDTQAKK EHMSKLLFSK EPEHGECNLP PELTFNDRVL EEMTAREDLK ELFVKIYVDN QTDGSRGEME KNNTCPQD
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.