Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47279 | Canola | nucleus | 86.44 | 89.15 |
| Bra015430.1-P | Field mustard | nucleus | 95.14 | 82.88 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 67.01 | 65.53 |
| CDX77430 | Canola | nucleus | 27.19 | 55.72 |
| CDY59589 | Canola | nucleus | 6.67 | 52.27 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 24.22 | 51.78 |
| CDY29038 | Canola | nucleus | 6.6 | 51.7 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 12.04 | 47.03 |
| KRH39939 | Soybean | nucleus | 20.96 | 46.84 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 15.23 | 46.67 |
| CDX93009 | Canola | nucleus | 30.24 | 42.99 |
| CDX94823 | Canola | nucleus | 30.17 | 42.71 |
| CDY66441 | Canola | nucleus | 31.47 | 42.01 |
| Os02t0650800-00 | Rice | cytosol | 24.0 | 35.33 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 23.57 | 34.46 |
| KRH23851 | Soybean | mitochondrion, nucleus | 28.5 | 33.7 |
| KRH46527 | Soybean | nucleus | 27.48 | 33.01 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 29.08 | 32.18 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 24.51 | 31.86 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 24.37 | 31.82 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 24.08 | 31.41 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 23.71 | 28.71 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 22.48 | 28.55 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 7.32 | 28.45 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 25.38 | 27.56 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 25.16 | 27.28 |
| CDY67491 | Canola | cytosol | 3.12 | 27.22 |
| KXG31163 | Sorghum | nucleus | 24.51 | 26.45 |
| Zm00001d051324_P001 | Maize | nucleus | 24.87 | 25.65 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 25.67 | 24.67 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 26.61 | 24.65 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 26.54 | 24.65 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 26.61 | 24.58 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 26.32 | 24.49 |
| CDY37734 | Canola | nucleus | 13.34 | 24.34 |
| OQU77943 | Sorghum | mitochondrion | 25.67 | 24.28 |
| CDX89710 | Canola | nucleus | 14.87 | 23.73 |
| CDY23754 | Canola | cytosol | 13.2 | 23.61 |
| CDY16534 | Canola | nucleus | 6.67 | 21.1 |
| CDX78226 | Canola | cytosol | 2.68 | 20.0 |
| CDX92463 | Canola | nucleus | 18.2 | 19.84 |
| CDY56857 | Canola | cytosol | 17.91 | 19.53 |
| CDX92308 | Canola | nucleus | 9.72 | 14.71 |
| CDX99258 | Canola | nucleus | 9.57 | 14.55 |
| CDX92882 | Canola | nucleus | 9.86 | 12.05 |
| CDY51705 | Canola | nucleus | 10.01 | 11.91 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.43 | 11.34 |
| CDY43772 | Canola | mitochondrion | 9.5 | 11.29 |
| CDX95047 | Canola | nucleus | 11.82 | 11.01 |
| CDX93550 | Canola | nucleus | 11.89 | 10.98 |
| CDY22674 | Canola | nucleus | 5.8 | 10.39 |
| CDY32510 | Canola | mitochondrion, nucleus | 9.43 | 8.09 |
| CDY37413 | Canola | mitochondrion, nucleus | 9.35 | 8.05 |
| CDX73492 | Canola | mitochondrion | 11.17 | 7.4 |
| CDX78225 | Canola | mitochondrion | 8.77 | 5.99 |
| CDY06321 | Canola | nucleus | 1.6 | 3.78 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.22 | 2.78 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.65 | 2.3 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078F6M2 | UniProt:A0A078F6M2 | EnsemblPlants:CDY10115 |
| ProteinID:CDY10115 | ProteinID:CDY10115.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00031920001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF858 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EE96F4 | SEG:seg | : | : | : | : |
Description
BnaC05g03580DBnaC05g03580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6M2]
Coordinates
chrLK032001:-:95150..100334
Molecular Weight (calculated)
153802.0 Da
IEP (calculated)
4.797
GRAVY (calculated)
-0.579
Length
1379 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDWIGSRIKF RNKERLEEVK KRKPAEEEAH DHDSDLVDDT ETYNTDHDSD LVDVTVTYNN NLPAEVTDNN FSDSGGVKRT ESEHNMEEEE EEGLFSVRVE
0101: EVDTSVPGPS GLSIKDKLLS DENLDLDMVK SAPSLPDEVL GLDVIKTVPE LSDEIPDLDV IKSVPSSSSE SSIQQKLCDE IMDVIRSAAS SSESSIKEKL
0201: SEEIMDVDVV KSVPKLSNDI LVEDVVKSVP SSSGSKNIKD KCSSEVRGVE AAKPVPTEIE IISDSESETK HSAKKKLSFA ECSRVLDSTS ESSEEEGASE
0301: ANNNAKDDVT VESLSSSSSS SSSSSSSSAL SLSSSSSSSS SEDEVSSKEV VGESDDDDCR KASSPIRKVS EVRRKPLGRY KRAGPSSITP RKQLLKIRKL
0401: NHPEEEEEED RFQAKPVKEV TKEHSNVVFT CVHCSKENTG IFDSDSCCFR PHAITRGEED ADDDDLNKND YVPPEKPSTS RPETENPKEV ITPARLSTSK
0501: PETVKAKEIQ APEMPSRQFS LKTSMPVTAA EGLATPALVN EPVDNESASS ISSGDESGYE SEPSLKEKEA AKSNNNSGWR MLDGSRKEVD LFRLLVNSVR
0601: ENDRLGEEEE DDILVSSPEE EQPEEQDERK YDADGLLIIR PPPLVEMFGM VEPAPPVVSE AQIEEDKMWE EVAFYTNANE VDLQLQSEAK ISADDSPGAA
0701: CRQGNHELCL DLEIGLKCIH CCFVLREIRG LDVSEWGERN TSGRRKNDRS EEEENSNNII GSLEFEANGN NNNLKEGCES TQGTVWDKIP GVKSQMYPHQ
0801: QEGFEFIWRN LAGTIMLNEL EDFENSEETG GCIMSHAPGT GKTRLTIIFL QSYLECFPNC KPVIIAPASL LLTWAEEFKK WNISIPFHNL SSLEFTGREN
0901: SAASKLLMQK NSSARSNNEI RMVKIYSWIK SKSILGISYN LYEKLAGVKD EDKKTKGKPD KELEDIREIL MDVPGLLVLD EAHTPRNQRS CIWKTLSKVE
1001: TQKRILLSGT PFQNNFLELG NVLGLARPKY LERLMSTLKK SGMTVTKRGK KALGDKINNR GIEELKAVML PFVHVHKGSI LQKSLPGLRE CVVVLNPPDL
1101: QRKVLESIEV THNQKTKNVF ETEHKLSLVS VHPSLVSHCK LTGKESLTID EALLAQLKKV RLDPNQSVKT RFLMEFIKLC VVIKEKVLVF SQYIDPLKLI
1201: MKHLVNWFKW TEGEEVLYMH GKLEQKQRQT LINEFNDPKS KAKVLLASTK ACSEGINLVG ASRVILLDVV WNPAVERQAI SRAYRIGQKR IVYTYHLVAK
1301: GTPEGTKYCK QAQKDRISEL VFACSSRPDK GKEKIAEAVT EDKVLDTMVK HLNLGDMFDN LIVQPKEADL VEGFSILMP
0101: EVDTSVPGPS GLSIKDKLLS DENLDLDMVK SAPSLPDEVL GLDVIKTVPE LSDEIPDLDV IKSVPSSSSE SSIQQKLCDE IMDVIRSAAS SSESSIKEKL
0201: SEEIMDVDVV KSVPKLSNDI LVEDVVKSVP SSSGSKNIKD KCSSEVRGVE AAKPVPTEIE IISDSESETK HSAKKKLSFA ECSRVLDSTS ESSEEEGASE
0301: ANNNAKDDVT VESLSSSSSS SSSSSSSSAL SLSSSSSSSS SEDEVSSKEV VGESDDDDCR KASSPIRKVS EVRRKPLGRY KRAGPSSITP RKQLLKIRKL
0401: NHPEEEEEED RFQAKPVKEV TKEHSNVVFT CVHCSKENTG IFDSDSCCFR PHAITRGEED ADDDDLNKND YVPPEKPSTS RPETENPKEV ITPARLSTSK
0501: PETVKAKEIQ APEMPSRQFS LKTSMPVTAA EGLATPALVN EPVDNESASS ISSGDESGYE SEPSLKEKEA AKSNNNSGWR MLDGSRKEVD LFRLLVNSVR
0601: ENDRLGEEEE DDILVSSPEE EQPEEQDERK YDADGLLIIR PPPLVEMFGM VEPAPPVVSE AQIEEDKMWE EVAFYTNANE VDLQLQSEAK ISADDSPGAA
0701: CRQGNHELCL DLEIGLKCIH CCFVLREIRG LDVSEWGERN TSGRRKNDRS EEEENSNNII GSLEFEANGN NNNLKEGCES TQGTVWDKIP GVKSQMYPHQ
0801: QEGFEFIWRN LAGTIMLNEL EDFENSEETG GCIMSHAPGT GKTRLTIIFL QSYLECFPNC KPVIIAPASL LLTWAEEFKK WNISIPFHNL SSLEFTGREN
0901: SAASKLLMQK NSSARSNNEI RMVKIYSWIK SKSILGISYN LYEKLAGVKD EDKKTKGKPD KELEDIREIL MDVPGLLVLD EAHTPRNQRS CIWKTLSKVE
1001: TQKRILLSGT PFQNNFLELG NVLGLARPKY LERLMSTLKK SGMTVTKRGK KALGDKINNR GIEELKAVML PFVHVHKGSI LQKSLPGLRE CVVVLNPPDL
1101: QRKVLESIEV THNQKTKNVF ETEHKLSLVS VHPSLVSHCK LTGKESLTID EALLAQLKKV RLDPNQSVKT RFLMEFIKLC VVIKEKVLVF SQYIDPLKLI
1201: MKHLVNWFKW TEGEEVLYMH GKLEQKQRQT LINEFNDPKS KAKVLLASTK ACSEGINLVG ASRVILLDVV WNPAVERQAI SRAYRIGQKR IVYTYHLVAK
1301: GTPEGTKYCK QAQKDRISEL VFACSSRPDK GKEKIAEAVT EDKVLDTMVK HLNLGDMFDN LIVQPKEADL VEGFSILMP
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.