Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32510 | Canola | mitochondrion, nucleus | 96.25 | 96.01 |
| AT1G03750.1 | Thale cress | plastid | 45.76 | 85.03 |
| VIT_12s0028g03440.t01 | Wine grape | plastid | 36.2 | 66.36 |
| KRH25617 | Soybean | nucleus | 35.64 | 65.63 |
| PGSC0003DMT400082782 | Potato | plastid | 35.27 | 63.63 |
| Solyc07g053870.2.1 | Tomato | plastid | 34.83 | 62.91 |
| GSMUA_Achr7P00330_001 | Banana | plastid | 33.46 | 61.68 |
| TraesCS2D01G202400.1 | Wheat | plastid | 32.33 | 59.75 |
| TraesCS2A01G185300.1 | Wheat | plastid | 32.27 | 59.63 |
| HORVU2Hr1G037590.4 | Barley | plastid | 32.58 | 59.52 |
| TraesCS2B01G222000.1 | Wheat | plastid | 32.21 | 59.52 |
| Zm00001d013828_P002 | Maize | plastid | 32.08 | 58.48 |
| EER91354 | Sorghum | plastid | 32.33 | 58.33 |
| Os05t0247900-01 | Rice | plastid | 30.9 | 57.83 |
| CDX78226 | Canola | cytosol | 3.62 | 31.35 |
| CDX99258 | Canola | nucleus | 12.05 | 21.28 |
| CDX92308 | Canola | nucleus | 11.98 | 21.08 |
| CDX92882 | Canola | nucleus | 12.98 | 18.42 |
| CDY51705 | Canola | nucleus | 13.23 | 18.29 |
| CDX77430 | Canola | nucleus | 7.49 | 17.83 |
| CDY37734 | Canola | nucleus | 7.49 | 15.87 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.3 | 15.79 |
| CDY43772 | Canola | mitochondrion | 11.42 | 15.78 |
| CDY23754 | Canola | cytosol | 7.49 | 15.56 |
| CDY67491 | Canola | cytosol | 1.5 | 15.19 |
| CDX89710 | Canola | nucleus | 7.05 | 13.08 |
| CDY59589 | Canola | nucleus | 1.44 | 13.07 |
| CDX93009 | Canola | nucleus | 7.68 | 12.68 |
| CDX95047 | Canola | nucleus | 11.61 | 12.57 |
| CDY29038 | Canola | nucleus | 1.37 | 12.5 |
| CDX94823 | Canola | nucleus | 7.55 | 12.42 |
| CDX93550 | Canola | nucleus | 11.49 | 12.32 |
| CDY66441 | Canola | nucleus | 7.68 | 11.91 |
| CDY22674 | Canola | nucleus | 5.56 | 11.56 |
| CDY16534 | Canola | nucleus | 2.81 | 10.32 |
| CDX92463 | Canola | nucleus | 7.55 | 9.57 |
| CDY56857 | Canola | cytosol | 7.49 | 9.49 |
| CDY47279 | Canola | nucleus | 7.87 | 9.42 |
| CDY10115 | Canola | nucleus | 8.05 | 9.35 |
| CDX73492 | Canola | mitochondrion | 11.36 | 8.75 |
| CDX78225 | Canola | mitochondrion | 8.05 | 6.39 |
| CDY06321 | Canola | nucleus | 1.06 | 2.92 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.19 | 0.77 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:12.4.1.4.3 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | Gene3D:3.40.50.10810 | GO:A0A078HKL9 |
| UniProt:A0A078HKL9 | EnsemblPlants:CDY37413 | ProteinID:CDY37413 | ProteinID:CDY37413.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00063990001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000719 | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:Kinase-like_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00069 | PFAM:PF00176 |
| PFAM:PF00271 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF804 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EE91D9 | SEG:seg | : | : | : | : |
Description
BnaC08g45510DBnaC08g45510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKL9]
Coordinates
chrLK032400:-:14426..22640
Molecular Weight (calculated)
181811.0 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.546
Length
1602 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGCVSSKHRL FRRKSTLKES SVKRSSAIDS PRIDDGIQPG DGFDRSSSRG EAKDKLVDSE TLSSTRFNDH PEIVDHVVQA VHDQELARAS SAVVEPDLEI
0101: GPNIGPNVLK QKLDQWNSND SKVRLVESQK LSSKRFSDHH HVEKEPENLG AEASVQAVPW EVSKNQSVIV SRDIELKQAW PTWLVSVAGE ALVDWAPRRA
0201: STFKKLEKIG QGTYSSVYRA RDLIHNQIVA LKKVRFDLND IESVKFMARE IIVMRRLDHP NVLKLEALIT DHVSSSLYLV FEYMDHDLSG LSSLPGVKFS
0301: EPQVKCYMQQ LLIGLEHCHS RGVLHRDIKC SNLLIDRNGV LKIADFGLAT FFDPAKTIPL TSHVVTLWYR PPELLLGASH YGVGVDLWST GCILGELYAG
0401: KPILPGKTEV EQLHKIFKLC GSPSESYWRK HNLPSSAGFR SSVPYRRKLS EMYKDFPTSV LLLLETLLSI DPDHRNSADS ALESEYFKTK PFACDPSCLP
0501: KYPPSKEIDA NERDDAKRQR QTVEKQERQE SQAIPHKRKY VPPIKANHLS VTIEKQYLDL KSRNDSFKSF KEERTSHGPG PDYQNIHTRN NQGGERGSHS
0601: GPFMSKRNMA KSTMHEKENV PAPRYPPSRV NTKILTGSLS SKALLDQPVM DQGKRDRRAY NRADTMDSRR MTTPVDLAWY NPSDSNIYMS RPLFAQPSRV
0701: DQMLEEHDIQ LQEFNRQAKK SREGKTDKAH DFLSRLAMSL LHTFKQTLKP CSTLPSSSSA SSQISSTQEL EPTRKPPKSS LSQQLLRLDD SYFLPSKHES
0801: RISNTQVEDS DLLPEETLKR SIKFDEENKE EDDEISIEFG RPGLNRVEFD YSGPYEPLVL SSIGVIPIIQ VPASINCRLL EHQREGVKFL YNLYRNNHGG
0901: ILGDDMGLGK TIQTIAFLAG VYGKDSDPAG TDTSVSDSLK GPVLIICPSS VIHNWESEFS RWASFFKVSV YHGANRDTIL EKLNARGFEV LVTSFDTFRI
1001: QGPVLSEINW EIVIADEAHR LKNEKSKLYE ACLKIKTKKR LGLTGTVMQN KITELFNLFE WVAPGSLGTR EHFREYYDEP LKQGQRATAP ERFVHIAEKR
1101: KQHLVSVLSK YMLRRTKEET IGHLMMGKED NVVFCQMSEL QKRVYQRMLQ LPEIQCLVNK DKPCACGSPL KQSECCRRIV PDGPIWSYIH RDSPDGCDSC
1201: PFCLVLPCLV KLQQVSNHLE LVKPNARDDA DKQKKDADFV SAVFGMDIDL AGGVAASESF MDLSDVKHCG KMRALEKLMA SWISKGDKIL LFSYSVRMLD
1301: ILEKFLIRKG YSFARLDGST PTNLRQSLVD DFNASPSKQV FLISTRAGGL GLNLVSANRV VIFDPNWNPS HDLQAQDRSF RYGQKRHVVV FRLLAAGSLE
1401: ELVYTRQVYK QQLSNIAVAG KMETRYFEGV QDCKEFQGEL FGISNLFRDL SDKLFTSEIV ELRKDSKKGV SDDEEEILCS SKQETQEPIL GDLGIVYAHR
1501: NEDIINGGRA ATSTSSQRFN VERDSNENLE YADQKKKKRK GGSEEEGICF SKRERKREKY KMLAEFKGME IMEFSRWVLS ASPFVREKLL QEFSDRVKYQ
1601: TS
0101: GPNIGPNVLK QKLDQWNSND SKVRLVESQK LSSKRFSDHH HVEKEPENLG AEASVQAVPW EVSKNQSVIV SRDIELKQAW PTWLVSVAGE ALVDWAPRRA
0201: STFKKLEKIG QGTYSSVYRA RDLIHNQIVA LKKVRFDLND IESVKFMARE IIVMRRLDHP NVLKLEALIT DHVSSSLYLV FEYMDHDLSG LSSLPGVKFS
0301: EPQVKCYMQQ LLIGLEHCHS RGVLHRDIKC SNLLIDRNGV LKIADFGLAT FFDPAKTIPL TSHVVTLWYR PPELLLGASH YGVGVDLWST GCILGELYAG
0401: KPILPGKTEV EQLHKIFKLC GSPSESYWRK HNLPSSAGFR SSVPYRRKLS EMYKDFPTSV LLLLETLLSI DPDHRNSADS ALESEYFKTK PFACDPSCLP
0501: KYPPSKEIDA NERDDAKRQR QTVEKQERQE SQAIPHKRKY VPPIKANHLS VTIEKQYLDL KSRNDSFKSF KEERTSHGPG PDYQNIHTRN NQGGERGSHS
0601: GPFMSKRNMA KSTMHEKENV PAPRYPPSRV NTKILTGSLS SKALLDQPVM DQGKRDRRAY NRADTMDSRR MTTPVDLAWY NPSDSNIYMS RPLFAQPSRV
0701: DQMLEEHDIQ LQEFNRQAKK SREGKTDKAH DFLSRLAMSL LHTFKQTLKP CSTLPSSSSA SSQISSTQEL EPTRKPPKSS LSQQLLRLDD SYFLPSKHES
0801: RISNTQVEDS DLLPEETLKR SIKFDEENKE EDDEISIEFG RPGLNRVEFD YSGPYEPLVL SSIGVIPIIQ VPASINCRLL EHQREGVKFL YNLYRNNHGG
0901: ILGDDMGLGK TIQTIAFLAG VYGKDSDPAG TDTSVSDSLK GPVLIICPSS VIHNWESEFS RWASFFKVSV YHGANRDTIL EKLNARGFEV LVTSFDTFRI
1001: QGPVLSEINW EIVIADEAHR LKNEKSKLYE ACLKIKTKKR LGLTGTVMQN KITELFNLFE WVAPGSLGTR EHFREYYDEP LKQGQRATAP ERFVHIAEKR
1101: KQHLVSVLSK YMLRRTKEET IGHLMMGKED NVVFCQMSEL QKRVYQRMLQ LPEIQCLVNK DKPCACGSPL KQSECCRRIV PDGPIWSYIH RDSPDGCDSC
1201: PFCLVLPCLV KLQQVSNHLE LVKPNARDDA DKQKKDADFV SAVFGMDIDL AGGVAASESF MDLSDVKHCG KMRALEKLMA SWISKGDKIL LFSYSVRMLD
1301: ILEKFLIRKG YSFARLDGST PTNLRQSLVD DFNASPSKQV FLISTRAGGL GLNLVSANRV VIFDPNWNPS HDLQAQDRSF RYGQKRHVVV FRLLAAGSLE
1401: ELVYTRQVYK QQLSNIAVAG KMETRYFEGV QDCKEFQGEL FGISNLFRDL SDKLFTSEIV ELRKDSKKGV SDDEEEILCS SKQETQEPIL GDLGIVYAHR
1501: NEDIINGGRA ATSTSSQRFN VERDSNENLE YADQKKKKRK GGSEEEGICF SKRERKREKY KMLAEFKGME IMEFSRWVLS ASPFVREKLL QEFSDRVKYQ
1601: TS
001: MSLLHTFKET LKPCGSFPSS SSLRVSSTQE LEPSRKPPKS SLSQQLLRLD DSYFLPSKHE SKISKTQVED FDHNEDDHKR NIKFDEEEVD EDDERSIEFG
101: RPGLSRAEFD YSGPYEPLML SSIGEIPIIH VPASINCRLL EHQREGVKFM YNLYKNNHGG ILGDDMGLGK TIQTIAFLAA VYGKDGDAGE SCLLESDKGP
201: VLIICPSSII HNWESEFSRW ASFFKVSVYH GSNRDMILEK LKARGVEVLV TSFDTFRIQG PVLSGINWEI VIADEAHRLK NEKSKLYEAC LEIKTKKRIG
301: LTGTVMQNKI SELFNLFEWV APGSLGTREH FRDFYDEPLK LGQRATAPER FVQIADKRKQ HLGSLLRKYM LRRTKEETIG HLMMGKEDNV VFCQMSQLQR
401: RVYQRMIQLP EIQCLVNKDN PCACGSPLKQ SECCRRIVPD GTIWSYLHRD NHDGCDSCPF CLVLPCLMKL QQISNHLELI KPNPKDEPEK QKKDAEFVST
501: VFGTDIDLLG GISASKSFMD LSDVKHCGKM RALEKLMASW ISKGDKILLF SYSVRMLDIL EKFLIRKGYS FARLDGSTPT NLRQSLVDDF NASPSKQVFL
601: ISTKAGGLGL NLVSANRVVI FDPNWNPSHD LQAQDRSFRY GQKRHVVVFR LLSAGSLEEL VYTRQVYKQQ LSNIAVAGKM ETRYFEGVQD CKEFQGELFG
701: ISNLFRDLSD KLFTSDIVEL HRDSNIDENK KRSLLETGVS EDEKEEEVMC SYKPEMEKPI LKDLGIVYAH RNEDIINIGE TTTSTSQRLN GDGNSADRKK
801: KKRKGCSEEE DMSSSNREQK REKYKMLAEF KGMEILEFSR WVLSASPFDR EKLLQDFLER VK
101: RPGLSRAEFD YSGPYEPLML SSIGEIPIIH VPASINCRLL EHQREGVKFM YNLYKNNHGG ILGDDMGLGK TIQTIAFLAA VYGKDGDAGE SCLLESDKGP
201: VLIICPSSII HNWESEFSRW ASFFKVSVYH GSNRDMILEK LKARGVEVLV TSFDTFRIQG PVLSGINWEI VIADEAHRLK NEKSKLYEAC LEIKTKKRIG
301: LTGTVMQNKI SELFNLFEWV APGSLGTREH FRDFYDEPLK LGQRATAPER FVQIADKRKQ HLGSLLRKYM LRRTKEETIG HLMMGKEDNV VFCQMSQLQR
401: RVYQRMIQLP EIQCLVNKDN PCACGSPLKQ SECCRRIVPD GTIWSYLHRD NHDGCDSCPF CLVLPCLMKL QQISNHLELI KPNPKDEPEK QKKDAEFVST
501: VFGTDIDLLG GISASKSFMD LSDVKHCGKM RALEKLMASW ISKGDKILLF SYSVRMLDIL EKFLIRKGYS FARLDGSTPT NLRQSLVDDF NASPSKQVFL
601: ISTKAGGLGL NLVSANRVVI FDPNWNPSHD LQAQDRSFRY GQKRHVVVFR LLSAGSLEEL VYTRQVYKQQ LSNIAVAGKM ETRYFEGVQD CKEFQGELFG
701: ISNLFRDLSD KLFTSDIVEL HRDSNIDENK KRSLLETGVS EDEKEEEVMC SYKPEMEKPI LKDLGIVYAH RNEDIINIGE TTTSTSQRLN GDGNSADRKK
801: KKRKGCSEEE DMSSSNREQK REKYKMLAEF KGMEILEFSR WVLSASPFDR EKLLQDFLER VK
Arabidopsis Description
SWI2Switch 2 [Source:UniProtKB/Swiss-Prot;Acc:F4I2H2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.