Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032544.1-P | Field mustard | nucleus | 99.75 | 97.5 |
| CDY37413 | Canola | mitochondrion, nucleus | 96.01 | 96.25 |
| AT1G03750.1 | Thale cress | plastid | 46.08 | 85.85 |
| VIT_12s0028g03440.t01 | Wine grape | plastid | 36.05 | 66.25 |
| KRH25617 | Soybean | nucleus | 35.43 | 65.4 |
| PGSC0003DMT400082782 | Potato | plastid | 35.06 | 63.4 |
| Solyc07g053870.2.1 | Tomato | plastid | 34.56 | 62.57 |
| GSMUA_Achr7P00330_001 | Banana | plastid | 33.44 | 61.8 |
| TraesCS2D01G202400.1 | Wheat | plastid | 32.32 | 59.86 |
| HORVU2Hr1G037590.4 | Barley | plastid | 32.57 | 59.64 |
| TraesCS2A01G185300.1 | Wheat | plastid | 32.19 | 59.63 |
| TraesCS2B01G222000.1 | Wheat | plastid | 32.13 | 59.52 |
| Zm00001d013828_P002 | Maize | plastid | 32.13 | 58.7 |
| EER91354 | Sorghum | plastid | 32.44 | 58.67 |
| Os05t0247900-01 | Rice | plastid | 30.95 | 58.06 |
| CDX78226 | Canola | cytosol | 3.67 | 31.89 |
| CDX99258 | Canola | nucleus | 12.08 | 21.39 |
| CDX92308 | Canola | nucleus | 12.02 | 21.19 |
| CDX92882 | Canola | nucleus | 12.83 | 18.25 |
| CDY51705 | Canola | nucleus | 13.08 | 18.12 |
| CDX77430 | Canola | nucleus | 7.41 | 17.68 |
| CDY37734 | Canola | nucleus | 7.47 | 15.87 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.21 | 15.71 |
| CDY43772 | Canola | mitochondrion | 11.33 | 15.69 |
| CDY23754 | Canola | cytosol | 7.47 | 15.56 |
| CDY67491 | Canola | cytosol | 1.49 | 15.19 |
| CDX89710 | Canola | nucleus | 7.04 | 13.08 |
| CDY59589 | Canola | nucleus | 1.43 | 13.07 |
| CDX95047 | Canola | nucleus | 11.58 | 12.57 |
| CDY29038 | Canola | nucleus | 1.37 | 12.5 |
| CDX93009 | Canola | nucleus | 7.53 | 12.47 |
| CDX93550 | Canola | nucleus | 11.46 | 12.32 |
| CDX94823 | Canola | nucleus | 7.41 | 12.22 |
| CDY66441 | Canola | nucleus | 7.53 | 11.71 |
| CDY22674 | Canola | nucleus | 5.6 | 11.69 |
| CDY16534 | Canola | nucleus | 2.8 | 10.32 |
| CDX92463 | Canola | nucleus | 7.53 | 9.57 |
| CDY56857 | Canola | cytosol | 7.47 | 9.49 |
| CDY10115 | Canola | nucleus | 8.09 | 9.43 |
| CDY47279 | Canola | nucleus | 7.85 | 9.42 |
| CDX73492 | Canola | mitochondrion | 11.33 | 8.75 |
| CDX78225 | Canola | mitochondrion | 7.97 | 6.34 |
| CDY06321 | Canola | nucleus | 1.06 | 2.92 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.19 | 0.77 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:12.4.1.4.3 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | Gene3D:3.40.50.10810 | GO:A0A078H1F3 |
| UniProt:A0A078H1F3 | EnsemblPlants:CDY32510 | ProteinID:CDY32510 | ProteinID:CDY32510.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00052492001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000719 | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:Kinase-like_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00069 | PFAM:PF00176 | PFAM:PF00271 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF326 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE568B |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g50860DBnaA09g50860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1F3]
Coordinates
chrLK032295:+:299571..307615
Molecular Weight (calculated)
182421.0 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.554
Length
1606 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGCVSSKHRL FRRKSTLKES SVKRSSAIDS PRIDDGIQQG DGFDRSSSRG EAKDKLVDSE TLSSTRFNDH PEIVDHVVQA VHDQELARAS SAVVEPDLEI
0101: GPNIGPNVLK QKLDQWNSND SKVRLVESQK LSSKRFSDHH HVEKEPENLG AEASVQAVPW EVKKNQSVIV SRDIELKQAW PTWLVSVAGE ALVDWAPRRA
0201: STFEKLEKIG QGTYSSVYRA RDLIHNKIVA LKKVRFDLND IESVKFMARE IIVMRRLDHP NVLKLEALIT DHVSSSLYLV FEYMDHDLLG LSSLPGVKFS
0301: EPQVKCYMQQ LLSGLEHCHS RGVLHRDIKG SNLLIDRNGV LKIADFGLAT FFDPAKTIPL TSHVVTLWYR PPELLLGASH YGVGVDLWST GCILGELYAG
0401: KPILPGKTEV EQLHKIFKLC GSPTESYWRK HNLPSSAGFR SRVPYRRKLS EMFKDFPTSV LLLLETLLSI DPDHRNSADS ALESEYFKTK PFACDPSCLP
0501: KYPPSKEIDA NERDEAKTQR QMVEKQERQE SQAISHKRKY VPPIKANHLS VNIEKQYLDL KRRNDSFKSF KEERTPNGQV PGYQNMNTRN NQTGERGSHS
0601: GPFMSKRNMA KSTIHVKENV PAPRYPPSRV NPKILTSSLS SKALLDQPVM DQRKIDRRVY NRADTMDSRR MTTPVDLAWY NPSDSNIYMS RPLLAQPSRV
0701: DQMLEEHDIQ LQEFNRQAKK SREGKTDKAL DFLSLWQRDR LAMSSLLHTF KQTLKPCSTF PSSSSSSSQT SSTQELEPTR KPPKSSLSQQ LLRLDDSYFL
0801: PSKHESRISN TQVEDSNLLP EETHKRSIKF DEEDDEISIE FGRPGLNRVE FDYSGPYEPL VLSSIGEIPI IQVPASINCR LLEHQREGVK FLFNLYRNNH
0901: GGILGDDMGL GKTIQTIAFL AGVYGKDSDA AGTDTSVSDS QKGPVLIICP SSVIHNWESE FSRWASFFKV SVYHGANRDT ILEKLNARGV EVLVTSFDTF
1001: RIQGPVLSEI NWEIVIADEA HRLKNEKSKL YEACLKIKTK KRLGLTGTVM QNKITELFNL FEWVAPGSLG TREHFREYYD EPLKQGQRAT APERFVHIAE
1101: KRKQHLVSVL SKYMLRRTKE ETIGHLMMGK EDNVVFCQMS ELQKRVYQRM LQLPEIQCLV NKDKPCACGS PLKQSECCRR IVPDGPIWSY IHRDSPDGCD
1201: SCPFCLVLPC LVKLQQVSNH LELVKPNARD EPEKQKKDAD FVSAVFGSDI DLAGGVAASE SFMDLSDVKH CGKMRALEKL MASWISKGDK ILLFSFSVRM
1301: LDILEKFLIR KGYSFARLDG STPTNLRQSL VDDFNASPSK QVFLISTRAG GLGLNLVSAN RVVIFDPNWN PSHDLQAQDR SFRYGQKRHV VVFRLLAAGS
1401: LEELVYTRQV YKQQLSNIAV AGKMETRYFE GVQDCKEFQG ELFGISNLFR DLSDKLFTSE IVELRKDSKK GVSDDEEEIL CSSKQETQEP MLGDLGIVYA
1501: HRNEDIINGG RTATSTSSQR FNGEGDSNEN LECADHKKKK KRKGGSEEEE GMSFSKRERK REKYKMLAEF KGMEIMEFSR WVLSASPFVR EKLLQEFSDR
1601: VKYQTS
0101: GPNIGPNVLK QKLDQWNSND SKVRLVESQK LSSKRFSDHH HVEKEPENLG AEASVQAVPW EVKKNQSVIV SRDIELKQAW PTWLVSVAGE ALVDWAPRRA
0201: STFEKLEKIG QGTYSSVYRA RDLIHNKIVA LKKVRFDLND IESVKFMARE IIVMRRLDHP NVLKLEALIT DHVSSSLYLV FEYMDHDLLG LSSLPGVKFS
0301: EPQVKCYMQQ LLSGLEHCHS RGVLHRDIKG SNLLIDRNGV LKIADFGLAT FFDPAKTIPL TSHVVTLWYR PPELLLGASH YGVGVDLWST GCILGELYAG
0401: KPILPGKTEV EQLHKIFKLC GSPTESYWRK HNLPSSAGFR SRVPYRRKLS EMFKDFPTSV LLLLETLLSI DPDHRNSADS ALESEYFKTK PFACDPSCLP
0501: KYPPSKEIDA NERDEAKTQR QMVEKQERQE SQAISHKRKY VPPIKANHLS VNIEKQYLDL KRRNDSFKSF KEERTPNGQV PGYQNMNTRN NQTGERGSHS
0601: GPFMSKRNMA KSTIHVKENV PAPRYPPSRV NPKILTSSLS SKALLDQPVM DQRKIDRRVY NRADTMDSRR MTTPVDLAWY NPSDSNIYMS RPLLAQPSRV
0701: DQMLEEHDIQ LQEFNRQAKK SREGKTDKAL DFLSLWQRDR LAMSSLLHTF KQTLKPCSTF PSSSSSSSQT SSTQELEPTR KPPKSSLSQQ LLRLDDSYFL
0801: PSKHESRISN TQVEDSNLLP EETHKRSIKF DEEDDEISIE FGRPGLNRVE FDYSGPYEPL VLSSIGEIPI IQVPASINCR LLEHQREGVK FLFNLYRNNH
0901: GGILGDDMGL GKTIQTIAFL AGVYGKDSDA AGTDTSVSDS QKGPVLIICP SSVIHNWESE FSRWASFFKV SVYHGANRDT ILEKLNARGV EVLVTSFDTF
1001: RIQGPVLSEI NWEIVIADEA HRLKNEKSKL YEACLKIKTK KRLGLTGTVM QNKITELFNL FEWVAPGSLG TREHFREYYD EPLKQGQRAT APERFVHIAE
1101: KRKQHLVSVL SKYMLRRTKE ETIGHLMMGK EDNVVFCQMS ELQKRVYQRM LQLPEIQCLV NKDKPCACGS PLKQSECCRR IVPDGPIWSY IHRDSPDGCD
1201: SCPFCLVLPC LVKLQQVSNH LELVKPNARD EPEKQKKDAD FVSAVFGSDI DLAGGVAASE SFMDLSDVKH CGKMRALEKL MASWISKGDK ILLFSFSVRM
1301: LDILEKFLIR KGYSFARLDG STPTNLRQSL VDDFNASPSK QVFLISTRAG GLGLNLVSAN RVVIFDPNWN PSHDLQAQDR SFRYGQKRHV VVFRLLAAGS
1401: LEELVYTRQV YKQQLSNIAV AGKMETRYFE GVQDCKEFQG ELFGISNLFR DLSDKLFTSE IVELRKDSKK GVSDDEEEIL CSSKQETQEP MLGDLGIVYA
1501: HRNEDIINGG RTATSTSSQR FNGEGDSNEN LECADHKKKK KRKGGSEEEE GMSFSKRERK REKYKMLAEF KGMEIMEFSR WVLSASPFVR EKLLQEFSDR
1601: VKYQTS
001: MSLLHTFKET LKPCGSFPSS SSLRVSSTQE LEPSRKPPKS SLSQQLLRLD DSYFLPSKHE SKISKTQVED FDHNEDDHKR NIKFDEEEVD EDDERSIEFG
101: RPGLSRAEFD YSGPYEPLML SSIGEIPIIH VPASINCRLL EHQREGVKFM YNLYKNNHGG ILGDDMGLGK TIQTIAFLAA VYGKDGDAGE SCLLESDKGP
201: VLIICPSSII HNWESEFSRW ASFFKVSVYH GSNRDMILEK LKARGVEVLV TSFDTFRIQG PVLSGINWEI VIADEAHRLK NEKSKLYEAC LEIKTKKRIG
301: LTGTVMQNKI SELFNLFEWV APGSLGTREH FRDFYDEPLK LGQRATAPER FVQIADKRKQ HLGSLLRKYM LRRTKEETIG HLMMGKEDNV VFCQMSQLQR
401: RVYQRMIQLP EIQCLVNKDN PCACGSPLKQ SECCRRIVPD GTIWSYLHRD NHDGCDSCPF CLVLPCLMKL QQISNHLELI KPNPKDEPEK QKKDAEFVST
501: VFGTDIDLLG GISASKSFMD LSDVKHCGKM RALEKLMASW ISKGDKILLF SYSVRMLDIL EKFLIRKGYS FARLDGSTPT NLRQSLVDDF NASPSKQVFL
601: ISTKAGGLGL NLVSANRVVI FDPNWNPSHD LQAQDRSFRY GQKRHVVVFR LLSAGSLEEL VYTRQVYKQQ LSNIAVAGKM ETRYFEGVQD CKEFQGELFG
701: ISNLFRDLSD KLFTSDIVEL HRDSNIDENK KRSLLETGVS EDEKEEEVMC SYKPEMEKPI LKDLGIVYAH RNEDIINIGE TTTSTSQRLN GDGNSADRKK
801: KKRKGCSEEE DMSSSNREQK REKYKMLAEF KGMEILEFSR WVLSASPFDR EKLLQDFLER VK
101: RPGLSRAEFD YSGPYEPLML SSIGEIPIIH VPASINCRLL EHQREGVKFM YNLYKNNHGG ILGDDMGLGK TIQTIAFLAA VYGKDGDAGE SCLLESDKGP
201: VLIICPSSII HNWESEFSRW ASFFKVSVYH GSNRDMILEK LKARGVEVLV TSFDTFRIQG PVLSGINWEI VIADEAHRLK NEKSKLYEAC LEIKTKKRIG
301: LTGTVMQNKI SELFNLFEWV APGSLGTREH FRDFYDEPLK LGQRATAPER FVQIADKRKQ HLGSLLRKYM LRRTKEETIG HLMMGKEDNV VFCQMSQLQR
401: RVYQRMIQLP EIQCLVNKDN PCACGSPLKQ SECCRRIVPD GTIWSYLHRD NHDGCDSCPF CLVLPCLMKL QQISNHLELI KPNPKDEPEK QKKDAEFVST
501: VFGTDIDLLG GISASKSFMD LSDVKHCGKM RALEKLMASW ISKGDKILLF SYSVRMLDIL EKFLIRKGYS FARLDGSTPT NLRQSLVDDF NASPSKQVFL
601: ISTKAGGLGL NLVSANRVVI FDPNWNPSHD LQAQDRSFRY GQKRHVVVFR LLSAGSLEEL VYTRQVYKQQ LSNIAVAGKM ETRYFEGVQD CKEFQGELFG
701: ISNLFRDLSD KLFTSDIVEL HRDSNIDENK KRSLLETGVS EDEKEEEVMC SYKPEMEKPI LKDLGIVYAH RNEDIINIGE TTTSTSQRLN GDGNSADRKK
801: KKRKGCSEEE DMSSSNREQK REKYKMLAEF KGMEILEFSR WVLSASPFDR EKLLQDFLER VK
Arabidopsis Description
SWI2Switch 2 [Source:UniProtKB/Swiss-Prot;Acc:F4I2H2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.