Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29038 | Canola | nucleus | 17.22 | 94.89 |
| CDY59589 | Canola | nucleus | 16.91 | 93.18 |
| CDX94823 | Canola | nucleus | 92.27 | 91.89 |
| Bra001944.1-P | Field mustard | nucleus | 99.48 | 90.53 |
| CDX77430 | Canola | nucleus | 59.48 | 85.74 |
| CDY66441 | Canola | nucleus | 78.56 | 73.77 |
| AT3G24340.1 | Thale cress | nucleus | 64.43 | 55.21 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 33.3 | 50.08 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 17.01 | 46.74 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 20.82 | 44.89 |
| KRH39939 | Soybean | nucleus | 28.04 | 44.08 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 32.37 | 33.3 |
| Os02t0650800-00 | Rice | cytosol | 31.44 | 32.55 |
| KRH23851 | Soybean | mitochondrion, nucleus | 37.73 | 31.39 |
| CDY47279 | Canola | nucleus | 43.2 | 31.34 |
| KRH46527 | Soybean | nucleus | 36.8 | 31.1 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 38.97 | 30.34 |
| CDY10115 | Canola | nucleus | 42.99 | 30.24 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 32.47 | 29.83 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 32.47 | 29.69 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 32.27 | 29.61 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 29.79 | 26.61 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 9.69 | 26.48 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 31.03 | 26.43 |
| CDY67491 | Canola | cytosol | 4.23 | 25.95 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 33.4 | 25.51 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 33.3 | 25.39 |
| KXG31163 | Sorghum | nucleus | 32.47 | 24.65 |
| CDY37734 | Canola | nucleus | 18.97 | 24.34 |
| CDY23754 | Canola | cytosol | 18.97 | 23.87 |
| Zm00001d051324_P001 | Maize | nucleus | 32.58 | 23.64 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 35.98 | 23.5 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 35.77 | 23.41 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 34.54 | 23.34 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 35.88 | 23.31 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 35.77 | 23.3 |
| OQU77943 | Sorghum | mitochondrion | 34.33 | 22.84 |
| CDX89710 | Canola | nucleus | 19.48 | 21.88 |
| CDY16534 | Canola | nucleus | 9.69 | 21.56 |
| CDX78226 | Canola | cytosol | 4.02 | 21.08 |
| CDX92463 | Canola | nucleus | 24.54 | 18.81 |
| CDY56857 | Canola | cytosol | 24.43 | 18.74 |
| CDX92308 | Canola | nucleus | 13.81 | 14.71 |
| CDX99258 | Canola | nucleus | 13.61 | 14.55 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 14.33 | 12.13 |
| CDX92882 | Canola | nucleus | 13.81 | 11.87 |
| CDY51705 | Canola | nucleus | 14.02 | 11.73 |
| CDY43772 | Canola | mitochondrion | 14.02 | 11.72 |
| CDX95047 | Canola | nucleus | 15.77 | 10.34 |
| CDX93550 | Canola | nucleus | 15.77 | 10.25 |
| CDY22674 | Canola | nucleus | 7.22 | 9.09 |
| CDY37413 | Canola | mitochondrion, nucleus | 12.68 | 7.68 |
| CDY32510 | Canola | mitochondrion, nucleus | 12.47 | 7.53 |
| CDX73492 | Canola | mitochondrion | 12.27 | 5.72 |
| CDX78225 | Canola | mitochondrion | 8.56 | 4.11 |
| CDY06321 | Canola | nucleus | 1.24 | 2.06 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.21 | 1.85 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.1 | 0.26 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078DX49 | EnsemblPlants:CDX93009 | ProteinID:CDX93009 |
| ProteinID:CDX93009.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00154897001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF858 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EE56F1 | SEG:seg | : | : | : | : |
Description
BnaA03g37310D
Coordinates
chrLK031874:-:674675..678048
Molecular Weight (calculated)
111153.0 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.639
Length
970 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMTTCVGRR TRSRTESYLN DLLNQSKGIS VAVQSNSRPA PLRDSSSPEK PKRRRKRKSK DDDEVEFVGT IYPKGKREKE IVVEDDNVGS PPMIALSLES
101: DRACGVSVDD AMGDDDGDVE FVRTIYPEED DRAVDDENLI VSDYMEKSSD SSYAESSDSG FDCSEDDEFR GARDTATVKK KSPTKSIWQR KKIVEEDIFS
201: EDETAEVDTR EDPIVRERSS EKVHEQRKRR RFHREKKKNH LSVVDLLGDS FENFDVGENL WVSPPINLRF GCEEPEPVEK TEEEKEIDRL WQDMALALSL
301: EGLHSSTYFK NGDVSCSNGK HDFVLDEEIG LKCRCCSYVS VEMKDVSPAM YRANVKYRDT VNYKNTCRTK GDPLLDSLDL EASEHNSNVA SLKDTQGTVW
401: EYIPGIKNTL YPHQREGFEF MWKNLAGTTK LDELKSSVVK ESGGCIISHA PGTGKTRLTI VFLQSYLQQF PDSHPVVIAP ASLLLTWEEE FKKWNSNIPF
501: YNMSNQELSG LENPSAVSLL KVNRQHRSKT DSVRMVKLYS WRNKKSILGI SYSLYEKLTG NKCASGETQK FRKMLLDFPG LLVLDEGHTP RNQNSCIWKV
601: LTEVKTEKRI ILSGTPFQNN FKELSNVLCL TRPAYKDKIS SRLHDLTRLS QEGKNGRFDE EIGIAELKDM IAPFVHVHKG NILRESLPGL RDCVVVLNAP
701: FQQAKILTRI DHSQKTFDLE HKLSAVSVHP SLYLRRKQTD KERLTIGPVV LKSLESLTLE SKEGAKTRFL IDFIRFSETV KEKVLVFSQH IDTLELIRDQ
801: LSAVFGWTEG EEILYMHGQL QQKFRQRLIN NFNKSDSKSK VLLASTKACS EGINLVGASR VVLLDVDWNP SVERQAISRA YRIGQKRVVY TYHLMVKGTT
901: EWDKYCKQNK KHRISEMVFS PTNEKDKLIE NEVVSEDKIL DEMVRHEKLK DMFEKILYRK KESDMFTNIL
101: DRACGVSVDD AMGDDDGDVE FVRTIYPEED DRAVDDENLI VSDYMEKSSD SSYAESSDSG FDCSEDDEFR GARDTATVKK KSPTKSIWQR KKIVEEDIFS
201: EDETAEVDTR EDPIVRERSS EKVHEQRKRR RFHREKKKNH LSVVDLLGDS FENFDVGENL WVSPPINLRF GCEEPEPVEK TEEEKEIDRL WQDMALALSL
301: EGLHSSTYFK NGDVSCSNGK HDFVLDEEIG LKCRCCSYVS VEMKDVSPAM YRANVKYRDT VNYKNTCRTK GDPLLDSLDL EASEHNSNVA SLKDTQGTVW
401: EYIPGIKNTL YPHQREGFEF MWKNLAGTTK LDELKSSVVK ESGGCIISHA PGTGKTRLTI VFLQSYLQQF PDSHPVVIAP ASLLLTWEEE FKKWNSNIPF
501: YNMSNQELSG LENPSAVSLL KVNRQHRSKT DSVRMVKLYS WRNKKSILGI SYSLYEKLTG NKCASGETQK FRKMLLDFPG LLVLDEGHTP RNQNSCIWKV
601: LTEVKTEKRI ILSGTPFQNN FKELSNVLCL TRPAYKDKIS SRLHDLTRLS QEGKNGRFDE EIGIAELKDM IAPFVHVHKG NILRESLPGL RDCVVVLNAP
701: FQQAKILTRI DHSQKTFDLE HKLSAVSVHP SLYLRRKQTD KERLTIGPVV LKSLESLTLE SKEGAKTRFL IDFIRFSETV KEKVLVFSQH IDTLELIRDQ
801: LSAVFGWTEG EEILYMHGQL QQKFRQRLIN NFNKSDSKSK VLLASTKACS EGINLVGASR VVLLDVDWNP SVERQAISRA YRIGQKRVVY TYHLMVKGTT
901: EWDKYCKQNK KHRISEMVFS PTNEKDKLIE NEVVSEDKIL DEMVRHEKLK DMFEKILYRK KESDMFTNIL
0001: MDMTSCVARR TRSRTESYLN SILNKSKGIS GEEEDQSLGC VNSRTEKRRV NMRDACSPSP RKKKRRRRKD DDDDVVFVRT EYPEGKRDDE NVGSTSGNLQ
0101: SKSFDFGDRV CDFDADDRNL GCEEKASNFN PIDDDDDVVF VGTVQRENDH VEDDDNVGSA SVISPRVCDF DEDDAKVSGK ENPLSPDDDD DVVFLGTIAG
0201: ENQHVEDVNA GSEVCDILLD DANLRGEEKT YVSDEVVSLS SSSDDEEDPL EELGTDSREE VSGEDRDSGE SDMDEDANDS DSSDYVGESS DSSDVESSDS
0301: DFVCSEDEEG GTRDDATCEK NPSEKVYHHK KSRTFRRKHN FDVINLLAKS MLESKDVFKE DIFSWDKIAE VDSREDPVVR ESSSEKVNEH GKPRERRSFH
0401: RVREKNHLNG ESFYGGEKLC DGEETINYST EDSPPLNLRF GCEEPVLIEK TEEEKELDSL WEDMNVALTL EGMHSSTPDK NGDMLCSKGT HDFVLDDEIG
0501: LKCVHCAYVA VEIKDISPAM DKYRPSVNDN KKCSDRKGDP LPNRLEFDAS DPSSFVAPLD NIEGTVWQYV PGIKDTLYPH QQEGFEFIWK NLAGTTKINE
0601: LNSVGVKGSG GCIISHKAGT GKTRLTVVFL QSYLKRFPNS HPMVIAPATL MRTWEDEVRK WNVNIPFYNM NSLQLSGYED AEAVSRLEGN RHHNSIRMVK
0701: LVSWWKQKSI LGISYPLYEK LAANKNTEGM QVFRRMLVEL PGLLVLDEGH TPRNQSSLIW KVLTEVRTEK RIFLSGTLFQ NNFKELSNVL CLARPADKDT
0801: ISSRIHELSK CSQEGEHGRV NEENRIVDLK AMIAHFVHVH EGTILQESLP GLRDCVVVLN PPFQQKKILD RIDTSQNTFE FEHKLSAVSV HPSLYLCCNP
0901: TKKEDLVIGP ATLGTLKRLR LKYEEGVKTK FLIDFIRISG TVKEKVLVYS QYIDTLKLIM EQLIAECDWT EGEQILLMHG KVEQRDRQHM IDNFNKPDSG
1001: SKVLLASTKA CSEGISLVGA SRVVILDVVW NPSVESQAIS RAFRIGQKRA VFIYHLMVKD TSEWNKYCKQ SEKHRISELV FSSTNEKDKP INNEVVSKDR
1101: ILDEMVRHEK LKHIFEKILY HPKKSDMNTS FF
0101: SKSFDFGDRV CDFDADDRNL GCEEKASNFN PIDDDDDVVF VGTVQRENDH VEDDDNVGSA SVISPRVCDF DEDDAKVSGK ENPLSPDDDD DVVFLGTIAG
0201: ENQHVEDVNA GSEVCDILLD DANLRGEEKT YVSDEVVSLS SSSDDEEDPL EELGTDSREE VSGEDRDSGE SDMDEDANDS DSSDYVGESS DSSDVESSDS
0301: DFVCSEDEEG GTRDDATCEK NPSEKVYHHK KSRTFRRKHN FDVINLLAKS MLESKDVFKE DIFSWDKIAE VDSREDPVVR ESSSEKVNEH GKPRERRSFH
0401: RVREKNHLNG ESFYGGEKLC DGEETINYST EDSPPLNLRF GCEEPVLIEK TEEEKELDSL WEDMNVALTL EGMHSSTPDK NGDMLCSKGT HDFVLDDEIG
0501: LKCVHCAYVA VEIKDISPAM DKYRPSVNDN KKCSDRKGDP LPNRLEFDAS DPSSFVAPLD NIEGTVWQYV PGIKDTLYPH QQEGFEFIWK NLAGTTKINE
0601: LNSVGVKGSG GCIISHKAGT GKTRLTVVFL QSYLKRFPNS HPMVIAPATL MRTWEDEVRK WNVNIPFYNM NSLQLSGYED AEAVSRLEGN RHHNSIRMVK
0701: LVSWWKQKSI LGISYPLYEK LAANKNTEGM QVFRRMLVEL PGLLVLDEGH TPRNQSSLIW KVLTEVRTEK RIFLSGTLFQ NNFKELSNVL CLARPADKDT
0801: ISSRIHELSK CSQEGEHGRV NEENRIVDLK AMIAHFVHVH EGTILQESLP GLRDCVVVLN PPFQQKKILD RIDTSQNTFE FEHKLSAVSV HPSLYLCCNP
0901: TKKEDLVIGP ATLGTLKRLR LKYEEGVKTK FLIDFIRISG TVKEKVLVYS QYIDTLKLIM EQLIAECDWT EGEQILLMHG KVEQRDRQHM IDNFNKPDSG
1001: SKVLLASTKA CSEGISLVGA SRVVILDVVW NPSVESQAIS RAFRIGQKRA VFIYHLMVKD TSEWNKYCKQ SEKHRISELV FSSTNEKDKP INNEVVSKDR
1101: ILDEMVRHEK LKHIFEKILY HPKKSDMNTS FF
Arabidopsis Description
CLSY4SNF2 domain-containing protein CLASSY 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.