Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0392400-01 | Rice | cytosol, nucleus | 28.78 | 91.78 |
| OQU77943 | Sorghum | mitochondrion | 84.74 | 83.4 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 66.13 | 63.56 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 65.57 | 63.37 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 65.71 | 63.33 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 65.09 | 63.02 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 34.36 | 52.28 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 21.32 | 47.44 |
| CDY59589 | Canola | nucleus | 5.37 | 43.75 |
| CDY29038 | Canola | nucleus | 5.37 | 43.75 |
| CDX77430 | Canola | nucleus | 20.42 | 43.54 |
| KRH39939 | Soybean | nucleus | 16.38 | 38.09 |
| CDX93009 | Canola | nucleus | 23.34 | 34.54 |
| CDX94823 | Canola | nucleus | 23.28 | 34.29 |
| Bra015035.1-P | Field mustard | nucleus | 24.11 | 33.21 |
| CDY66441 | Canola | nucleus | 23.76 | 33.01 |
| Bra001944.1-P | Field mustard | nucleus | 24.18 | 32.55 |
| KRH23851 | Soybean | mitochondrion, nucleus | 24.67 | 30.36 |
| AT3G24340.1 | Thale cress | nucleus | 23.83 | 30.21 |
| Zm00001d051324_P001 | Maize | nucleus | 27.8 | 29.84 |
| KRH46527 | Soybean | nucleus | 23.55 | 29.44 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 24.39 | 28.09 |
| CDY47279 | Canola | nucleus | 24.95 | 26.78 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 25.51 | 25.96 |
| CDY10115 | Canola | nucleus | 24.67 | 25.67 |
| Zm00001d047708_P001 | Maize | cytosol | 3.07 | 25.58 |
| Bra015430.1-P | Field mustard | nucleus | 25.51 | 23.12 |
| Zm00001d024677_P003 | Maize | cytosol | 14.7 | 22.21 |
| Zm00001d049605_P037 | Maize | cytosol | 14.56 | 21.39 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 17.42 | 18.74 |
| Zm00001d013828_P002 | Maize | plastid | 8.64 | 14.11 |
| Zm00001d018151_P003 | Maize | nucleus | 8.99 | 13.33 |
| Zm00001d032801_P005 | Maize | nucleus | 12.96 | 12.53 |
| Zm00001d002950_P002 | Maize | nucleus | 9.41 | 12.45 |
| Zm00001d040203_P003 | Maize | cytosol | 10.59 | 12.09 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 11.36 | 7.97 |
Protein Annotations
| EntrezGene:103630322 | MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A8I429 | ProteinID:ABV80238.2 |
| ProteinID:AQK85698.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF937 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI00015F3FA3 |
| EnsemblPlantsGene:Zm00001d038113 | EnsemblPlants:Zm00001d038113_P001 | EnsemblPlants:Zm00001d038113_T001 | SEG:seg | : | : |
Description
required to maintain repression1Required to maintain repression 1%3B Required to maintain repression1
Coordinates
chr6:+:148382390..148390037
Molecular Weight (calculated)
161489.0 Da
IEP (calculated)
5.167
GRAVY (calculated)
-0.668
Length
1435 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRATPRVCG RRGVSQAAVE AAPSSSRARR RDKAPAVVMD LGDDDCGGGG ARKTVGGAAG RCEGSTKAPL PLLPPMMVPA GAVALRTRSR RRAMLAAAVV
0101: EEAPTKKKKK EGAIPDAAEA PRGHGSKAAA TSMATSSHKR RAGTSRSTSR DKRRARSGRA SEPARVGRAR KRKRNELEAP ARRERVKAPC VSESDDNSGR
0201: GDDASHDGDA EPRVGVAIGT DLVNGDHPAA KEVVEGAGDE DTGDGGNSGL ASTADVFAEE MAPFEDDYDD EMLEEQLVGD VIRAYSNGRN FDSDGVDWEA
0301: EDEMEFNDDA DNSDFMDDAD DSDFMDDAYE GGNSKPIQNH AKLEIQDWVN QKVVLSGGRC EARGEGDLEE ELDVGKEADE EDVEPKSEAA PGSDKRVLQL
0401: EILGSDEEIK VLENMSSAPS RKASVQSKLP TIPSCVAWRT RSSWGVNQDR LSYDTYFEEL SDEPKEDDDD TEVELDEVED DNNDDDSSDA YDKDDEEKEE
0501: EEEEAERRKL NNRICTSDED MINITVPTSR YDMFKKKNSS RYDIEWVEDE DASVDMLQPV SFKKDSSWKP VAVGNDTFTE QQKRSRFTWE LERRKKLKLE
0601: MKTNPLHERD LDSDPNSSGS DQIRKYGFKS DGSHKVDRKK KHTSPKSGKK PSSAIILKRQ SLLKLLVDKM SGDKSLASFP FDQNPQLQFI FKEMHPLVFS
0701: FGDEDLVAAD RPEQDVGLDM LWADFDFALE SENIGTYYDD ECQEGNQLDF SLAPVTPCSR GKHEFVIDDQ IGIRCKYCSL VNLEIKFMFP SLVSVFAEKS
0801: AWPNDKGVKN TLMFHDLYEQ GVNDTEQSQD IHQYGTVWNL IPGVISTMYE HQREAFEFMW TNLVGDIRLD EIKHGAKPDV VGGCVICHAP GTGKTRLAIV
0901: FIQTYMKVFP DCRPVIIAPR GMLFAWDEEF KKWNVDVPFH ILNTTDYTGK EDREICKLIK KEHRTEKLTR LVKLLSWNKG HGILGISYGL YTKLTSEKPG
1001: CTEENKVRSI LLDNPGLLVL DEGHTPRNER SVMWKTLGNV KTEKRIILSG TPFQNNFLEL YNILCLVRPR FGEMFLTKSR VGRRHYVSKK QKDKFSDKYE
1101: KGVWASLTSN VTDDNAEKVR SILKPFVHIH NGNILRTLPG LRESVIILKP LPLQKSIIKK VENIGSGNNF EHEYVISLAS THPSLVTAIN MSEEEASLID
1201: KPMLAKVRSN PYEGVKTRFV IEVVRLSEAL REKVLIFSQF IQPLELIKEH LRKFFKWREG KEILQMDGKI LPRYRQASIE AFNNPNNDSR VLLASTRACC
1301: EGISLTGASR IVLLDVVWNP AVGRQAISRA FRIGQKKFVY TYNLITYGTG EGDKYDRQAE KDHLSKLVFS TEDEFNNVRN MLSKAEMEHC SKFISEDKVL
1401: EEMTSHDQLK GMFLKIHYPP TESNIVYSYN QIATE
0101: EEAPTKKKKK EGAIPDAAEA PRGHGSKAAA TSMATSSHKR RAGTSRSTSR DKRRARSGRA SEPARVGRAR KRKRNELEAP ARRERVKAPC VSESDDNSGR
0201: GDDASHDGDA EPRVGVAIGT DLVNGDHPAA KEVVEGAGDE DTGDGGNSGL ASTADVFAEE MAPFEDDYDD EMLEEQLVGD VIRAYSNGRN FDSDGVDWEA
0301: EDEMEFNDDA DNSDFMDDAD DSDFMDDAYE GGNSKPIQNH AKLEIQDWVN QKVVLSGGRC EARGEGDLEE ELDVGKEADE EDVEPKSEAA PGSDKRVLQL
0401: EILGSDEEIK VLENMSSAPS RKASVQSKLP TIPSCVAWRT RSSWGVNQDR LSYDTYFEEL SDEPKEDDDD TEVELDEVED DNNDDDSSDA YDKDDEEKEE
0501: EEEEAERRKL NNRICTSDED MINITVPTSR YDMFKKKNSS RYDIEWVEDE DASVDMLQPV SFKKDSSWKP VAVGNDTFTE QQKRSRFTWE LERRKKLKLE
0601: MKTNPLHERD LDSDPNSSGS DQIRKYGFKS DGSHKVDRKK KHTSPKSGKK PSSAIILKRQ SLLKLLVDKM SGDKSLASFP FDQNPQLQFI FKEMHPLVFS
0701: FGDEDLVAAD RPEQDVGLDM LWADFDFALE SENIGTYYDD ECQEGNQLDF SLAPVTPCSR GKHEFVIDDQ IGIRCKYCSL VNLEIKFMFP SLVSVFAEKS
0801: AWPNDKGVKN TLMFHDLYEQ GVNDTEQSQD IHQYGTVWNL IPGVISTMYE HQREAFEFMW TNLVGDIRLD EIKHGAKPDV VGGCVICHAP GTGKTRLAIV
0901: FIQTYMKVFP DCRPVIIAPR GMLFAWDEEF KKWNVDVPFH ILNTTDYTGK EDREICKLIK KEHRTEKLTR LVKLLSWNKG HGILGISYGL YTKLTSEKPG
1001: CTEENKVRSI LLDNPGLLVL DEGHTPRNER SVMWKTLGNV KTEKRIILSG TPFQNNFLEL YNILCLVRPR FGEMFLTKSR VGRRHYVSKK QKDKFSDKYE
1101: KGVWASLTSN VTDDNAEKVR SILKPFVHIH NGNILRTLPG LRESVIILKP LPLQKSIIKK VENIGSGNNF EHEYVISLAS THPSLVTAIN MSEEEASLID
1201: KPMLAKVRSN PYEGVKTRFV IEVVRLSEAL REKVLIFSQF IQPLELIKEH LRKFFKWREG KEILQMDGKI LPRYRQASIE AFNNPNNDSR VLLASTRACC
1301: EGISLTGASR IVLLDVVWNP AVGRQAISRA FRIGQKKFVY TYNLITYGTG EGDKYDRQAE KDHLSKLVFS TEDEFNNVRN MLSKAEMEHC SKFISEDKVL
1401: EEMTSHDQLK GMFLKIHYPP TESNIVYSYN QIATE
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.