Factsheet for Zm00001d049605_P037

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024677_P003	Maize	cytosol	83.42	85.79
KXG24379	Sorghum	cytosol	84.14	84.74
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	54.15	78.72
Os06t0255700-01	Rice	cytosol	67.25	69.45
Os08t0243866-00	Rice	endoplasmic reticulum	42.89	64.86
TraesCS2B01G208700.1	Wheat	cytosol	60.8	64.85
TraesCS2D01G189900.1	Wheat	nucleus	61.82	63.45
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	62.33	62.46
Os08t0289400-00	Rice	cytosol, nucleus	32.96	60.98
TraesCS5D01G344400.1	Wheat	nucleus	58.85	60.02
TraesCS5A01G340400.1	Wheat	nucleus	58.85	60.02
HORVU5Hr1G085320.1	Barley	plastid	59.57	59.69
TraesCS2A01G182200.1	Wheat	plastid	62.54	58.81
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	37.05	53.16
VIT_03s0038g04290.t01	Wine grape	nucleus	11.16	49.32
KRH27453	Soybean	cytosol	41.66	46.09
Bra021841.1-P	Field mustard	cytosol	35.62	45.55
AT2G16390.2	Thale cress	nucleus	40.53	44.44
Solyc01g109970.2.1	Tomato	extracellular	40.33	43.44
PGSC0003DMT400079488	Potato	nucleus	40.53	42.81
CDX89710	Canola	nucleus	37.46	42.36
VIT_03s0038g00030.t01	Wine grape	nucleus	41.04	42.17
KRH20806	Soybean	cytosol	40.63	41.66
GSMUA_Achr6P04530_001	Banana	nucleus	36.44	40.14
Bra000888.1-P	Field mustard	cytosol	16.58	35.29
Zm00001d047708_P001	Maize	cytosol	3.79	21.51
Zm00001d051324_P001	Maize	nucleus	23.75	17.35
Zm00001d022576_P001	Maize	golgi, nucleus, plasma membrane	22.21	16.27
Zm00001d038113_P001	Maize	mitochondrion, nucleus	21.39	14.56
Zm00001d013828_P002	Maize	plastid	11.67	12.97
Zm00001d018151_P003	Maize	nucleus	12.49	12.6
Zm00001d002950_P002	Maize	nucleus	13.72	12.36
Zm00001d032801_P005	Maize	nucleus	16.17	10.65
Zm00001d040203_P003	Maize	cytosol	12.79	9.94
Zm00001d039160_P031	Maize	cytosol, mitochondrion, nucleus, plasma membrane	12.59	6.02

Protein Annotations

EntrezGene:100277391	MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A1D6PWG8
ProteinID:AQK50880.1	ProteinID:AQK50894.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718
InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799
PANTHER:PTHR10799:SF807	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540
UniParc:UPI0004DE7CB2	EnsemblPlantsGene:Zm00001d049605	EnsemblPlants:Zm00001d049605_P037	EnsemblPlants:Zm00001d049605_T037	SEG:seg	:

Description

Protein CHROMATIN REMODELING 35

Coordinates

chr4:+:37186744..37193409

Molecular Weight (calculated)

109946.0 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.384

Length

977 amino acids

Sequence
(BLAST)

001: MFSMYAVIIR DRGHRCYNNL FDFADTFPPN ICFLCIYYSR QRKPERNGSV FTPIAAMYSS GHALPVANRS HGLVFGSLSK DWDDIRQRKD QLVNFLASLE
101: RASGDSAAAG KIEDSKLASP VEPTEQKEKA AIIVLDSDDE DGNGSGNSKL ASETNKELGT SGLINNIAER MTFNGSQAFG TVHTYGDKNT QIVPYGQCSA
201: LVNQFPLQTS WQPSIQFERV VLQKRPEEQR MQDLVAASIA EKRAETQVFL SLPTEKKRRR SDPSLHASDD TATVPKQRKS KGATVVAAAN LSLVSQQTAT
301: SPEPDMVIEE EEKHKNESDG LDDYWKDFAL AVESTKLDEV DEAAIEKEDN GKMEDIDCNH DIRIHEDLGH VCRVCGMIVR RADSIIDYQW KKASRRRTNG
401: YGGHSKDADE IDCGTVKLSE DFIVADIAIH PRHARIMKPH QLEGFNFLVK NLIGDKPGGC ILAHAPGTGK TFMLISFIQS FMARYPSARP LVVLPKGILG
501: IWKTEIKRWQ VQDIPVYDFY SVKAEKRVEQ LQILKSWEDK MSILFLGYKQ FSTIVTDDGG SNVTAACRDR LLKVPNLLIL DEGHTPRNRE TNVLESLNRV
601: ETPRKVVLSG TLFQNHVEEV FNILNLVRPK FLRMESSRPT ARRIMSQVEI VGRSSKGLAD GAFTKAVEET LLNDENFKRK AHVIRGLREL TKDVLHYYKG
701: DILDELPGLV DFSVFLKLTP KQKDIIYKLE AHDRFKRNAV GSALYIHPCL SELSEVNAEH RANTFRDDLV DSLVDSITVR DGVKANFFMN ILSLANSAGE
801: KVLAFSQYIS PMIFFERLLV KKKGWHVGKE IFMISGDTSQ EDRELATDHF NNSADAKIMF GSIKACGEGI SLVGASRVVI LDVHLNPSVT RQAIGRAFRP
901: GQQKKVFVYR LVAADSDEVK VHETAFKKEV IPKLWFEWSE HCTTEDFKLG QIDIDDSGDE LLDTKAIRKD IKALYRR

Best Arabidopsis Sequence Match ( AT2G16390.1 )
(BLAST)

001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR

Arabidopsis Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.