Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079488 | Potato | nucleus | 97.13 | 95.24 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 45.65 | 60.79 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 42.89 | 57.89 |
| KRH27453 | Soybean | cytosol | 55.02 | 56.51 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 13.01 | 53.39 |
| AT2G16390.2 | Thale cress | nucleus | 51.27 | 52.19 |
| CDX89710 | Canola | nucleus | 49.06 | 51.5 |
| KRH20806 | Soybean | cytosol | 53.91 | 51.31 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 53.47 | 51.0 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 36.05 | 50.62 |
| Bra021841.1-P | Field mustard | cytosol | 41.35 | 49.08 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 17.42 | 48.32 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 43.99 | 43.56 |
| Os06t0255700-01 | Rice | cytosol | 45.31 | 43.45 |
| Solyc08g077650.1.1 | Tomato | cytosol | 2.43 | 42.31 |
| TraesCS2D01G189900.1 | Wheat | nucleus | 44.21 | 42.12 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 44.54 | 41.44 |
| KXG24379 | Sorghum | cytosol | 44.21 | 41.34 |
| Zm00001d024677_P003 | Maize | cytosol | 43.11 | 41.16 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 43.11 | 40.81 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 42.89 | 40.61 |
| Zm00001d049605_P037 | Maize | cytosol | 43.44 | 40.33 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 39.25 | 40.14 |
| HORVU5Hr1G085320.1 | Barley | plastid | 43.0 | 40.0 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 41.68 | 39.54 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 41.68 | 39.54 |
| EER92800 | Sorghum | nucleus, plastid | 41.01 | 39.37 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 40.79 | 38.91 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 40.68 | 38.64 |
| TraesCS2A01G182200.1 | Wheat | plastid | 44.21 | 38.59 |
| Bra000888.1-P | Field mustard | cytosol | 18.96 | 37.47 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 40.9 | 37.25 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 40.68 | 35.96 |
| Os03t0165266-00 | Rice | nucleus | 42.45 | 35.85 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 19.4 | 33.33 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 22.27 | 32.58 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 2.54 | 32.39 |
| Solyc08g077580.1.1 | Tomato | cytosol | 6.17 | 32.37 |
| Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.17 | 32.18 |
| Solyc03g061640.1.1 | Tomato | cytosol | 5.62 | 30.72 |
| Solyc01g068300.1.1 | Tomato | cytosol | 12.68 | 29.49 |
| Solyc08g062080.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 3.64 | 27.73 |
| Solyc04g054440.1.1 | Tomato | nucleus | 19.85 | 27.48 |
| Solyc01g068320.1.1 | Tomato | cytosol | 19.74 | 26.8 |
| Solyc08g062000.1.1 | Tomato | cytosol | 11.47 | 26.6 |
| Solyc08g061370.1.1 | Tomato | cytosol | 5.07 | 26.44 |
| Solyc08g062060.1.1 | Tomato | nucleus | 3.09 | 26.42 |
| Solyc08g077610.1.1 | Tomato | nucleus | 19.29 | 26.16 |
| Solyc08g061420.1.1 | Tomato | cytosol | 2.54 | 25.84 |
| Solyc08g061340.1.1 | Tomato | cytosol | 6.28 | 25.56 |
| Solyc08g061990.1.1 | Tomato | mitochondrion | 10.69 | 25.19 |
| Solyc08g061410.1.1 | Tomato | cytosol | 12.13 | 25.06 |
| Solyc08g077690.2.1 | Tomato | nucleus | 20.4 | 24.97 |
| Solyc02g033050.1.1 | Tomato | nucleus | 17.31 | 24.96 |
| Solyc01g060460.1.1 | Tomato | nucleus | 20.18 | 24.05 |
| Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 6.06 | 22.82 |
| Solyc08g062070.1.1 | Tomato | cytosol | 3.31 | 22.56 |
| Solyc08g061390.1.1 | Tomato | cytosol | 6.06 | 22.18 |
| Solyc08g077600.1.1 | Tomato | cytosol | 9.26 | 21.37 |
| Solyc08g077670.1.1 | Tomato | cytosol | 9.92 | 19.87 |
| Solyc06g050510.2.1 | Tomato | nucleus | 22.38 | 15.77 |
| Solyc07g053870.2.1 | Tomato | plastid | 13.34 | 13.64 |
| Solyc04g056400.2.1 | Tomato | cytosol, nucleus, plastid | 5.18 | 12.74 |
| Solyc04g050150.2.1 | Tomato | nucleus | 15.99 | 11.91 |
| Solyc01g068280.2.1 | Tomato | nucleus | 15.1 | 11.28 |
| Solyc04g056410.2.1 | Tomato | nucleus | 6.95 | 10.73 |
| Solyc09g066480.2.1 | Tomato | nucleus | 13.12 | 9.81 |
| Solyc08g074500.2.1 | Tomato | cytosol, nucleus, plastid | 11.58 | 8.28 |
| Solyc04g050160.2.1 | Tomato | nucleus | 1.65 | 4.76 |
| Solyc08g074520.1.1 | Tomato | nucleus | 1.43 | 1.98 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | UniProt:K4B3L0 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF807 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc01g109970.2 | EnsemblPlants:Solyc01g109970.2.1 | UniParc:UPI0002768D93 | SEG:seg |
Description
Protein CHROMATIN REMODELING 35 [Source:Projected from Arabidopsis thaliana (AT2G16390) UniProtKB/Swiss-Prot;Acc:Q9SIW2]
Coordinates
chr1:+:96788463..96796240
Molecular Weight (calculated)
102762.0 Da
IEP (calculated)
5.310
GRAVY (calculated)
-0.431
Length
907 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRAQPYSP RDLFSKGIKK MKFDESKNQS SPTAAATSWR EECEHGKEKG SSRVANRSET FAIPDLLKVL DSGKFGSVTR EIEDLIMRRM KAVNSCYASD
101: PSLPNKVLEW ERNHECAFKG NQPSPAVIDL EDGQETNNIA SGPMISACLP SAELLVIIDS DDEDTQKETI SPSQGIYSQI NPILGMPLKN AALDFQIKDF
201: MGREYGERQI SVEAVSLAGE AEIETDKGVY VGVEDDDEID DGAEQPDEGL TDIWNEMSFA LEFSKDVAAE PSPDEHTFEE EDECDHSFIL KDDIGYVCRI
301: CGVIKRSIET IIEFQYSKAA RSTRTYHYEG RSVKDIGPTE LLPDGIIPSD DIDMTEICVH PRHRKQMKSH QVEGFNFLVS NLLRDKGGCI MAHAPGSGKT
401: FMIISFLQSF MANNDRARPL VVLPRGILGT WKKEFLRWQV DEIPLYDFYS VKADNRSQQL EVLKQWSQER SVLFLGYKQF STIVCDNVGS ATAAACQEIL
501: LKCPSILILD EGHTPRNQDT DVLTSLEKVQ TRLKVVLSGT LYQNHVKEVF NILNLVRPKF LKLETSRSIK RTILSKVASS NRRNLLKKSS DNDFYELVEH
601: TLLKDDNFSR KSAVILGLRK MTEKVLHYYK GDFLEELPGL VDYTVLLKLH PKQKSEVAEL KKLGRKFKIS SEGSALYVHP QLKSLSRNCS AKDRVDEEKI
701: DTLLENLELR EGVKAKFYLN LLQLCETKGE KMLVFSQYLL PLKFLERLTV KTKGYSLGKE LFMITGDTDG DIRESSMERF NTSPDARVFF GSIKACGEGI
801: SLVGASRIII LDVHLNPSVT RQAIGRAFRP GQERKVYTYR LVASDSPEEE DHTTCFKKES IAKLWFEWSE NYAQPDFEME TVDINNCEDL FLESSRLNED
901: LVALYKR
101: PSLPNKVLEW ERNHECAFKG NQPSPAVIDL EDGQETNNIA SGPMISACLP SAELLVIIDS DDEDTQKETI SPSQGIYSQI NPILGMPLKN AALDFQIKDF
201: MGREYGERQI SVEAVSLAGE AEIETDKGVY VGVEDDDEID DGAEQPDEGL TDIWNEMSFA LEFSKDVAAE PSPDEHTFEE EDECDHSFIL KDDIGYVCRI
301: CGVIKRSIET IIEFQYSKAA RSTRTYHYEG RSVKDIGPTE LLPDGIIPSD DIDMTEICVH PRHRKQMKSH QVEGFNFLVS NLLRDKGGCI MAHAPGSGKT
401: FMIISFLQSF MANNDRARPL VVLPRGILGT WKKEFLRWQV DEIPLYDFYS VKADNRSQQL EVLKQWSQER SVLFLGYKQF STIVCDNVGS ATAAACQEIL
501: LKCPSILILD EGHTPRNQDT DVLTSLEKVQ TRLKVVLSGT LYQNHVKEVF NILNLVRPKF LKLETSRSIK RTILSKVASS NRRNLLKKSS DNDFYELVEH
601: TLLKDDNFSR KSAVILGLRK MTEKVLHYYK GDFLEELPGL VDYTVLLKLH PKQKSEVAEL KKLGRKFKIS SEGSALYVHP QLKSLSRNCS AKDRVDEEKI
701: DTLLENLELR EGVKAKFYLN LLQLCETKGE KMLVFSQYLL PLKFLERLTV KTKGYSLGKE LFMITGDTDG DIRESSMERF NTSPDARVFF GSIKACGEGI
801: SLVGASRIII LDVHLNPSVT RQAIGRAFRP GQERKVYTYR LVASDSPEEE DHTTCFKKES IAKLWFEWSE NYAQPDFEME TVDINNCEDL FLESSRLNED
901: LVALYKR
001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.