Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G280600.1 | Wheat | nucleus | 95.9 | 95.5 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 96.53 | 92.17 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 87.59 | 81.19 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 51.31 | 78.71 |
| EER92800 | Sorghum | nucleus, plastid | 58.57 | 58.94 |
| Os03t0165266-00 | Rice | nucleus | 63.51 | 56.24 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 36.49 | 50.95 |
| Bra021841.1-P | Field mustard | cytosol | 36.59 | 45.55 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 10.52 | 45.25 |
| KRH27453 | Soybean | cytosol | 41.85 | 45.07 |
| AT2G16390.2 | Thale cress | nucleus | 40.48 | 43.21 |
| KRH20806 | Soybean | cytosol | 41.85 | 41.76 |
| TraesCS2D01G189900.1 | Wheat | nucleus | 41.01 | 40.97 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 40.9 | 40.9 |
| CDX89710 | Canola | nucleus | 37.12 | 40.86 |
| Solyc01g109970.2.1 | Tomato | extracellular | 38.91 | 40.79 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 40.59 | 40.29 |
| PGSC0003DMT400079488 | Potato | nucleus | 38.91 | 40.0 |
| Bra000888.1-P | Field mustard | cytosol | 17.56 | 36.38 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 33.44 | 35.85 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 23.34 | 17.68 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 19.45 | 17.04 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 22.61 | 16.93 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 5.68 | 16.51 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 11.57 | 16.39 |
| TraesCS2D01G202400.1 | Wheat | plastid | 13.99 | 15.34 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 9.67 | 13.77 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 13.46 | 13.4 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 20.71 | 13.27 |
| TraesCS6D01G300900.1 | Wheat | cytosol | 12.51 | 11.24 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 16.72 | 10.65 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 12.51 | 9.75 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 12.83 | 5.9 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF799 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4D01G279200 | EnsemblPlants:TraesCS4D01G279200.1 | TIGR:cd00046 | TIGR:cd00079 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:450324143..450329546
Molecular Weight (calculated)
107884.0 Da
IEP (calculated)
6.206
GRAVY (calculated)
-0.461
Length
951 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPTNCKRQK HEIGHDSLPS TQSLSTIISH NRSVRLRFLK GFNELKYGSV TEDYKAINKK RHELISTLEN LQLVPIKLPY ASAALNLSNA TLHDEAQSGN
101: NISSDNIVEL DPYNVGDDTH GTMDNTGAQE TVCLLDSDDE DMVKSFVYGN LSDSKQNTDF IQECMLAEQP CQYRDISSEA QLVVEPGKDS MDIDNEPKEI
201: ALFDGHSTSE PQLIKQGQND INIYAESRDK ERETREGEGE DVQSKQHMEN NNISVADSCE ISCEVIQSDS TANGHYNHYD NNDNPVDDLD DLWNEMSVAL
301: ACSKTIGSDH SIVPWEKNNS EVVDDCHHDF LMKDDLGIVC RVCGLIQQRI ENIFEINWKK RKQSHRTYAP EPRNYNELEA TTSPSGNILQ LVPGALSIHS
401: QHSEQMKPHQ VEGFNFLVKN LADENNPGGC ILAHAPGSGK TFMLISFVQS FLARYPAGRP LIILPKGILA TWRAEFVHWQ IKDMPIPLFD FYSSKANNRS
501: EQLKVLNLWE EKRSILLLGY HQFACIVSDR NTYKIEAVMC RDKLLKVPSL VILDEGHTPR NEQTDLLTAL GSIRTPRKVV LSGTLFQNHV REVFNILNLV
601: RPKFLKMEKP RAIVKRILSK VDMLGKSARS KYTSDKYFYD VVEGNLKKDA DDKMRVMIIQ NLRELTANVL HYYKGELLEE LPGLVDFTVF LNMSTEQEKI
701: LRSLVRLDNF SRKTACSAVY LHPCLKNIQN VEGKNRDIAV QKIDSIIKSG IDIKVGAKAK FIYNLLCLSE AAGEKVLVFS RYLNPLVFLE MLLIRMKGWK
801: PEVHMFKLNG KSTQEQRDKA VERFNHSADA KVLFGSIKAC GEGISLVGAS RVVILEVQEN PSVTRQAIGR AFRPGQSRMV HCYRLVAADS PEEEDHKTAS
901: GKEWKSKMWF EWNELCSNDD FELAAVDISE SGDRFLEHEA LRQDVKSLYR R
101: NISSDNIVEL DPYNVGDDTH GTMDNTGAQE TVCLLDSDDE DMVKSFVYGN LSDSKQNTDF IQECMLAEQP CQYRDISSEA QLVVEPGKDS MDIDNEPKEI
201: ALFDGHSTSE PQLIKQGQND INIYAESRDK ERETREGEGE DVQSKQHMEN NNISVADSCE ISCEVIQSDS TANGHYNHYD NNDNPVDDLD DLWNEMSVAL
301: ACSKTIGSDH SIVPWEKNNS EVVDDCHHDF LMKDDLGIVC RVCGLIQQRI ENIFEINWKK RKQSHRTYAP EPRNYNELEA TTSPSGNILQ LVPGALSIHS
401: QHSEQMKPHQ VEGFNFLVKN LADENNPGGC ILAHAPGSGK TFMLISFVQS FLARYPAGRP LIILPKGILA TWRAEFVHWQ IKDMPIPLFD FYSSKANNRS
501: EQLKVLNLWE EKRSILLLGY HQFACIVSDR NTYKIEAVMC RDKLLKVPSL VILDEGHTPR NEQTDLLTAL GSIRTPRKVV LSGTLFQNHV REVFNILNLV
601: RPKFLKMEKP RAIVKRILSK VDMLGKSARS KYTSDKYFYD VVEGNLKKDA DDKMRVMIIQ NLRELTANVL HYYKGELLEE LPGLVDFTVF LNMSTEQEKI
701: LRSLVRLDNF SRKTACSAVY LHPCLKNIQN VEGKNRDIAV QKIDSIIKSG IDIKVGAKAK FIYNLLCLSE AAGEKVLVFS RYLNPLVFLE MLLIRMKGWK
801: PEVHMFKLNG KSTQEQRDKA VERFNHSADA KVLFGSIKAC GEGISLVGAS RVVILEVQEN PSVTRQAIGR AFRPGQSRMV HCYRLVAADS PEEEDHKTAS
901: GKEWKSKMWF EWNELCSNDD FELAAVDISE SGDRFLEHEA LRQDVKSLYR R
001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.