Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G279200.1 | Wheat | cytosol | 95.5 | 95.9 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 96.65 | 92.67 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 86.91 | 80.9 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 78.01 | 77.93 |
| EER92800 | Sorghum | nucleus, plastid | 57.91 | 58.52 |
| Os03t0165266-00 | Rice | nucleus | 63.14 | 56.15 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 36.13 | 50.66 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 10.58 | 45.7 |
| Bra021841.1-P | Field mustard | cytosol | 36.13 | 45.16 |
| KRH27453 | Soybean | cytosol | 41.57 | 44.96 |
| AT2G16390.2 | Thale cress | nucleus | 40.21 | 43.1 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 40.63 | 42.36 |
| KRH20806 | Soybean | cytosol | 41.68 | 41.76 |
| CDX89710 | Canola | nucleus | 37.07 | 40.97 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 40.52 | 40.69 |
| Solyc01g109970.2.1 | Tomato | extracellular | 38.64 | 40.68 |
| PGSC0003DMT400079488 | Potato | nucleus | 38.74 | 40.0 |
| Bra000888.1-P | Field mustard | cytosol | 17.49 | 36.38 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 32.98 | 35.51 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 21.88 | 19.7 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 23.14 | 17.62 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 6.18 | 17.61 |
| TraesCS2B01G222000.1 | Wheat | plastid | 13.93 | 15.34 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 20.63 | 13.19 |
| TraesCS6B01G351900.1 | Wheat | nucleus | 12.46 | 11.86 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 16.54 | 9.96 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 12.36 | 9.24 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 12.67 | 5.85 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF799 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G280600 | EnsemblPlants:TraesCS4B01G280600.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:563620724..563626048
Molecular Weight (calculated)
108459.0 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.446
Length
955 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRCIDPTNY KMQKHEIGRD SSPGTQSLST IISHNRSVRL RFLKEFNELK YGSVTEDYKA INRKRHELIS TLEKLQLIPI KLPYASVALK SSNVTLHDEA
101: QSGNNISSDN IIKLDLYNVG DDTHATMDNT GAQETVCLLD SDDNDMVQSF VDGNLSDSKK NTDFIQECML AEQPSQYQDI SFEAQLVVEP GKDSTDIDNE
201: PKEIALLDGH STSEPQLIKQ GQNDINIYAE SRDKERETRE GEGEDVQSKQ HMENNNISVV DSCEISCEVI QSDSTANGHY NHYDNNDNPV DDLDDLWNEM
301: SLALACSKTI GSDHSIVPSE KNNSEVVDDC HHDFLMKDDL GIVCRVCGLI QQRIENIFEI NWKKHKQSHR TYAPEPRNYN ELEATTSPSG NILQVVPGAL
401: SIHSQHSEQM KPHQVEGFNF LVKNLADENN PGGCILAHAP GSGKTFMLIS FVQSFLARYP AGRPLIILPK GILATWRTEF VHWQIKDMPI PLFDFYSSKA
501: NNRSEQLKVL NLWEEKRSIL LLGYHQFACI VSDRNTYKIE VVMCRDKLLK VPSLVILDEG HTPRNEQTDL LTALGSIRTP RKVVLSGTLF QNHVREVFNI
601: LNLVRPKFLK MEKPRAIVKR ILSKVDMLGK SARSKYTSDK YFYDVVEGNL KKDADDKMRV MIIHNLRELT ANVLHYYKGE LLDELPGLVD FTVFLNMSTE
701: QEKILRSLVR LDNFSRKTAC SAVYLHPCLK NIQNVEGKNR DIAVQKIDSI IKSGIDIKVG AKAKFIYNLL CLSEAAGEKV LVFSRYLNPL VFLEMLLIRM
801: KGWKPEVHMF KLNGKSIQEQ RDKAVERFNH STDAKVLFGS IKACGEGISL VGASRVVILE VQENPSVTRQ AIGRAFRPGQ SRLVHCYRLV AADSPEEEDH
901: KTASGKEWKS KMWFEWNELC SNDDFELAAV DISESGDRFL EHEALRQDVK SLYRR
101: QSGNNISSDN IIKLDLYNVG DDTHATMDNT GAQETVCLLD SDDNDMVQSF VDGNLSDSKK NTDFIQECML AEQPSQYQDI SFEAQLVVEP GKDSTDIDNE
201: PKEIALLDGH STSEPQLIKQ GQNDINIYAE SRDKERETRE GEGEDVQSKQ HMENNNISVV DSCEISCEVI QSDSTANGHY NHYDNNDNPV DDLDDLWNEM
301: SLALACSKTI GSDHSIVPSE KNNSEVVDDC HHDFLMKDDL GIVCRVCGLI QQRIENIFEI NWKKHKQSHR TYAPEPRNYN ELEATTSPSG NILQVVPGAL
401: SIHSQHSEQM KPHQVEGFNF LVKNLADENN PGGCILAHAP GSGKTFMLIS FVQSFLARYP AGRPLIILPK GILATWRTEF VHWQIKDMPI PLFDFYSSKA
501: NNRSEQLKVL NLWEEKRSIL LLGYHQFACI VSDRNTYKIE VVMCRDKLLK VPSLVILDEG HTPRNEQTDL LTALGSIRTP RKVVLSGTLF QNHVREVFNI
601: LNLVRPKFLK MEKPRAIVKR ILSKVDMLGK SARSKYTSDK YFYDVVEGNL KKDADDKMRV MIIHNLRELT ANVLHYYKGE LLDELPGLVD FTVFLNMSTE
701: QEKILRSLVR LDNFSRKTAC SAVYLHPCLK NIQNVEGKNR DIAVQKIDSI IKSGIDIKVG AKAKFIYNLL CLSEAAGEKV LVFSRYLNPL VFLEMLLIRM
801: KGWKPEVHMF KLNGKSIQEQ RDKAVERFNH STDAKVLFGS IKACGEGISL VGASRVVILE VQENPSVTRQ AIGRAFRPGQ SRLVHCYRLV AADSPEEEDH
901: KTASGKEWKS KMWFEWNELC SNDDFELAAV DISESGDRFL EHEALRQDVK SLYRR
001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.