Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G280600.1 | Wheat | nucleus | 92.67 | 96.65 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 92.17 | 96.53 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 84.54 | 82.07 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 75.7 | 78.87 |
| EER92800 | Sorghum | nucleus, plastid | 56.12 | 59.15 |
| Os03t0165266-00 | Rice | nucleus | 61.85 | 57.36 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 34.64 | 50.66 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 10.24 | 46.15 |
| Bra021841.1-P | Field mustard | cytosol | 34.74 | 45.29 |
| KRH27453 | Soybean | cytosol | 39.96 | 45.07 |
| AT2G16390.2 | Thale cress | nucleus | 38.76 | 43.32 |
| KRH20806 | Soybean | cytosol | 40.16 | 41.97 |
| Solyc01g109970.2.1 | Tomato | extracellular | 37.25 | 40.9 |
| CDX89710 | Canola | nucleus | 35.34 | 40.74 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 38.86 | 40.69 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 38.86 | 40.4 |
| PGSC0003DMT400079488 | Potato | nucleus | 37.35 | 40.22 |
| TraesCS2A01G182200.1 | Wheat | plastid | 39.86 | 38.21 |
| Bra000888.1-P | Field mustard | cytosol | 16.87 | 36.6 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 31.53 | 35.4 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 21.08 | 19.89 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 20.78 | 19.58 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 11.24 | 18.54 |
| TraesCS2A01G089500.1 | Wheat | plastid | 22.29 | 17.61 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 19.48 | 17.03 |
| TraesCS2A01G185300.1 | Wheat | plastid | 13.45 | 15.46 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 19.88 | 13.3 |
| TraesCS6A01G321200.1 | Wheat | nucleus | 11.95 | 12.23 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 12.95 | 12.07 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 15.66 | 10.41 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 11.85 | 9.56 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 11.95 | 5.75 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF799 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4A01G022800 | EnsemblPlants:TraesCS4A01G022800.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:16249830..16256594
Molecular Weight (calculated)
112639.0 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.435
Length
996 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPPSSLVT ARRPLSETLL GSLGASLRTF LRSSMQPPRE KKIGSIDPTN YKMQKHEIGH DSSPGTQSLS TIISHNRSVR LRFLKEFNEL KYGSVTEDYK
101: AINRKRHELI STLEKLQLVP IKLPYASVAL KSSNVTLHDE AQSGNNISSD NIIELDLYNV GDDTHATMDN TGAQKTVCLL DSDDEDTVQS FVDGNLSDSK
201: QNTDFIQECM LAEQPCQYQD ISFEAQLVVE PGKDSMDIDN EPKEIALFDG HSTSEPQLIK QGQNDINIYA ESRDKERETG EGEGEDVQSK QHMENNNISV
301: ADSCEISCEV IQSNSTANGH YNHYDNNDNP VDDLDDLWNE MSVALACSKT IGSDHSIVPS EKNNSEVVDD CHHDFLMKDD LGIVCRVCGL IQQRIENIFE
401: INWKKRKQSH RTYTPEPRNY NELEATTSPS GNILQVVPSA LSIHSQHSEQ MKPHQVEGFN FLVKNLADEN NPGGCILAHA PGSGKTFMLI SFVQSFLARY
501: PAGRPLIILP KGILATWRTE FVHWQIKDMP IPLLDFYSSK ANTRSEQLKV LNLWEEKRSI LLLGYHQFAC IVSDRNTYKI EAVMCRDKLL KVPSLVILDE
601: GHTPRNEQTD LLTALGSIRT PRKVVLSGTL FQNHVREVFN ILNLVRPKFL KMEKPRAIVK RILSKVDMLG KSARSKYTSD KYFYDVVEGN LKKDADDKMR
701: VMIIQNLREL TANVLHYYKG ELLEELPGLV DFTVFLNMST EQENILRSLV RLDNFSRKTA CSAVYLHPCL KNIQNVEGKN RDIAVQKIDS IIKSGIDIKV
801: GAKAKFIYNL LCLSEAAGEK VLVFSRYLNP LVFLEMLLIR MKGWKPEVHM FKLNGKSTQE QRDKAVERFN HSADAKVLFG SIKACGEGIS LVGASRVVIL
901: EVQENPSVTR QAIGRAFRPG QSRMVHCYRL VAADSPEEED HMTASGKEWK SKMWFEWNEL CSSDDFELAA VDISESGDRF LEHEALRQDV KSLYRR
101: AINRKRHELI STLEKLQLVP IKLPYASVAL KSSNVTLHDE AQSGNNISSD NIIELDLYNV GDDTHATMDN TGAQKTVCLL DSDDEDTVQS FVDGNLSDSK
201: QNTDFIQECM LAEQPCQYQD ISFEAQLVVE PGKDSMDIDN EPKEIALFDG HSTSEPQLIK QGQNDINIYA ESRDKERETG EGEGEDVQSK QHMENNNISV
301: ADSCEISCEV IQSNSTANGH YNHYDNNDNP VDDLDDLWNE MSVALACSKT IGSDHSIVPS EKNNSEVVDD CHHDFLMKDD LGIVCRVCGL IQQRIENIFE
401: INWKKRKQSH RTYTPEPRNY NELEATTSPS GNILQVVPSA LSIHSQHSEQ MKPHQVEGFN FLVKNLADEN NPGGCILAHA PGSGKTFMLI SFVQSFLARY
501: PAGRPLIILP KGILATWRTE FVHWQIKDMP IPLLDFYSSK ANTRSEQLKV LNLWEEKRSI LLLGYHQFAC IVSDRNTYKI EAVMCRDKLL KVPSLVILDE
601: GHTPRNEQTD LLTALGSIRT PRKVVLSGTL FQNHVREVFN ILNLVRPKFL KMEKPRAIVK RILSKVDMLG KSARSKYTSD KYFYDVVEGN LKKDADDKMR
701: VMIIQNLREL TANVLHYYKG ELLEELPGLV DFTVFLNMST EQENILRSLV RLDNFSRKTA CSAVYLHPCL KNIQNVEGKN RDIAVQKIDS IIKSGIDIKV
801: GAKAKFIYNL LCLSEAAGEK VLVFSRYLNP LVFLEMLLIR MKGWKPEVHM FKLNGKSTQE QRDKAVERFN HSADAKVLFG SIKACGEGIS LVGASRVVIL
901: EVQENPSVTR QAIGRAFRPG QSRMVHCYRL VAADSPEEED HMTASGKEWK SKMWFEWNEL CSSDDFELAA VDISESGDRF LEHEALRQDV KSLYRR
001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.