Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G087600.1 | Wheat | nucleus | 93.58 | 93.95 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 92.78 | 93.3 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 90.8 | 90.59 |
| KXG37026 | Sorghum | nucleus | 63.28 | 64.88 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 62.17 | 58.77 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 38.7 | 45.19 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 34.42 | 34.2 |
| Solyc06g050510.2.1 | Tomato | nucleus | 34.26 | 33.57 |
| PGSC0003DMT400061540 | Potato | nucleus | 34.18 | 33.51 |
| AT3G42670.4 | Thale cress | nucleus | 32.67 | 32.75 |
| KRG97679 | Soybean | nucleus | 32.04 | 32.71 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 31.01 | 32.45 |
| AT5G20420.1 | Thale cress | cytosol | 32.43 | 32.43 |
| KRH73247 | Soybean | nucleus | 33.07 | 31.83 |
| Bra021058.1-P | Field mustard | nucleus | 32.04 | 31.79 |
| CDX92463 | Canola | nucleus | 31.88 | 31.78 |
| CDY56857 | Canola | cytosol | 31.8 | 31.7 |
| Bra002302.1-P | Field mustard | cytosol | 31.09 | 31.46 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 17.84 | 23.54 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 17.61 | 23.17 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 17.61 | 22.29 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 18.48 | 22.06 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 18.32 | 21.85 |
| TraesCS2A01G182200.1 | Wheat | plastid | 17.13 | 20.79 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 17.68 | 19.58 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 8.8 | 18.38 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 19.11 | 16.19 |
| TraesCS2A01G185300.1 | Wheat | plastid | 9.99 | 14.53 |
| Os04t0692750-01 | Rice | cytosol | 10.31 | 13.17 |
| TraesCS6A01G321200.1 | Wheat | nucleus | 9.91 | 12.85 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 11.26 | 11.51 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 9.6 | 11.32 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 13.16 | 11.07 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 10.94 | 6.67 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF792 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS2A01G089500 | EnsemblPlants:TraesCS2A01G089500.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:42704037..42710045
Molecular Weight (calculated)
143936.0 Da
IEP (calculated)
8.544
GRAVY (calculated)
-0.451
Length
1261 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPPALRVCS VPSQILSSFF CFTRSNPSFE AFYDGSWHGV NCIRVRDGGL FVKFIYSGST VEHNVDGDHL RLRSRRATYF DCSHVLKPGV DICVQSSHQL
0101: QGSATGEMKS SMLLCHDARL ITIKRNHIED QCLCLFVIML YKNQCPDNTE NGQVISDRRE QLVTLNNIFL LQKLQPKELH EGSVQWSCAE DCLSHNRSKL
0201: LSARFSQEIA HLVVLSILNG MEFSIKLVEG NIIYRIIKGG RARCNIDSIS TPPGFGNSME IVSFQLRNEA LCPIIRNIPV THAKKHNLTE GMRFTMKAEL
0301: DGQLEDRRFT VKTELDGLLD VFSYEQVDLR RSKRRKTQAE RFTSYDTPNF GRDRWKRRDA PSTKHGNSQR ALRRDSPVKV ESTYAEVPVN ITRKQTSATV
0401: FMVKENPNTT EGKHKSTARI TPVKEKPSSV EVKEESTVEE RSPGPHVPRT PAKSKEKNLR PPLSLWRKSF TSSRSLNGNS EPAFGRKRKE HMCEREYKKM
0501: INQCIGNIQS EMERDFEFNL GAPMMNYGQD FYGEVNFTWP ASADNDSQEE KDGLEEFWKE MDHSLTTLAL EKNQDSHSEA VHQTTAGLGK SEENPCDHDC
0601: MLDEGLGLVC RLCNVVCVEI KHIFPQMANG NGYNKERPGC RNLDHDDLVL DPSLLAILGP EFSELRGSGN LWGLIPDLEP KLLPHQRNAF EFIWKNLAGS
0701: LQLEEMYNPT ASTGGCVVAH TPGSGKTLLL ISFLVSYLKV HPRSRPLVLT PKSAIHTWMR EFEKWGISLP LHVLHQTDKR GKPMGPIDPR LQAILSNFRQ
0801: PNWKNICLVD RLDKLCKWHE HPSVLLMTYS SFLRLAKENS RMPQRAFMAQ VLINNPGLLI LDEGHNPRSN KSKLRRVLMK VKTEFRILMS GTVFQNNFEE
0901: YFNTLSLARP RFVDDVMTAL VPERKKETRG RRAKHREAVA RRIFVDRVGQ MIESSDNWDR AGGISLLNKL TCGFIDSFEG SKLRSLPGIH VYTIFMKPTE
1001: IQEDILSRIS MATSCGGRYL LEVELLITIA SIHPWLIKTI KSCSTYFTPE ELHKVDKYKR DFAVGCKAKF VIDLLHKSSY RGERVLLFCH NVSPISFLVE
1101: LIENVFGWRL GEEVLVLQGD QELPVRSDVM DKFNTDSQGK RKVLIASTTA CAEGISLTGA SRLVMLDSEW NHSKTRQAIA RAFRPGQERT VYVYLLVASG
1201: TWEEDKYSRN RRKAWMAKMV FHGRYFDDPL RNTVTDIDDD LLEELADEDK TKTFHMIVKQ D
0101: QGSATGEMKS SMLLCHDARL ITIKRNHIED QCLCLFVIML YKNQCPDNTE NGQVISDRRE QLVTLNNIFL LQKLQPKELH EGSVQWSCAE DCLSHNRSKL
0201: LSARFSQEIA HLVVLSILNG MEFSIKLVEG NIIYRIIKGG RARCNIDSIS TPPGFGNSME IVSFQLRNEA LCPIIRNIPV THAKKHNLTE GMRFTMKAEL
0301: DGQLEDRRFT VKTELDGLLD VFSYEQVDLR RSKRRKTQAE RFTSYDTPNF GRDRWKRRDA PSTKHGNSQR ALRRDSPVKV ESTYAEVPVN ITRKQTSATV
0401: FMVKENPNTT EGKHKSTARI TPVKEKPSSV EVKEESTVEE RSPGPHVPRT PAKSKEKNLR PPLSLWRKSF TSSRSLNGNS EPAFGRKRKE HMCEREYKKM
0501: INQCIGNIQS EMERDFEFNL GAPMMNYGQD FYGEVNFTWP ASADNDSQEE KDGLEEFWKE MDHSLTTLAL EKNQDSHSEA VHQTTAGLGK SEENPCDHDC
0601: MLDEGLGLVC RLCNVVCVEI KHIFPQMANG NGYNKERPGC RNLDHDDLVL DPSLLAILGP EFSELRGSGN LWGLIPDLEP KLLPHQRNAF EFIWKNLAGS
0701: LQLEEMYNPT ASTGGCVVAH TPGSGKTLLL ISFLVSYLKV HPRSRPLVLT PKSAIHTWMR EFEKWGISLP LHVLHQTDKR GKPMGPIDPR LQAILSNFRQ
0801: PNWKNICLVD RLDKLCKWHE HPSVLLMTYS SFLRLAKENS RMPQRAFMAQ VLINNPGLLI LDEGHNPRSN KSKLRRVLMK VKTEFRILMS GTVFQNNFEE
0901: YFNTLSLARP RFVDDVMTAL VPERKKETRG RRAKHREAVA RRIFVDRVGQ MIESSDNWDR AGGISLLNKL TCGFIDSFEG SKLRSLPGIH VYTIFMKPTE
1001: IQEDILSRIS MATSCGGRYL LEVELLITIA SIHPWLIKTI KSCSTYFTPE ELHKVDKYKR DFAVGCKAKF VIDLLHKSSY RGERVLLFCH NVSPISFLVE
1101: LIENVFGWRL GEEVLVLQGD QELPVRSDVM DKFNTDSQGK RKVLIASTTA CAEGISLTGA SRLVMLDSEW NHSKTRQAIA RAFRPGQERT VYVYLLVASG
1201: TWEEDKYSRN RRKAWMAKMV FHGRYFDDPL RNTVTDIDDD LLEELADEDK TKTFHMIVKQ D
0001: MKRKHYFEFN HPFNPCPFEV FCWGTWKAVE YLRIENGTMT MRLLENGQVL DDIKPFQRLR IRSRKATLID CTSFLRPGID VCVLYQRDEE TPEPVWVDAR
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
Arabidopsis Description
CHR38Chromatin remodeling 38 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.