Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 88.46 | 81.56 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 64.72 | 63.48 |
| TraesCS2A01G089500.1 | Wheat | plastid | 64.88 | 63.28 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 64.55 | 63.22 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 64.72 | 62.97 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 40.73 | 46.39 |
| AT3G42670.4 | Thale cress | nucleus | 34.96 | 34.18 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 34.88 | 33.81 |
| KRG97679 | Soybean | nucleus | 33.82 | 33.68 |
| Solyc06g050510.2.1 | Tomato | nucleus | 35.2 | 33.64 |
| PGSC0003DMT400061540 | Potato | nucleus | 35.12 | 33.59 |
| Bra021058.1-P | Field mustard | nucleus | 34.55 | 33.44 |
| AT5G20420.1 | Thale cress | cytosol | 33.66 | 32.83 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 31.95 | 32.61 |
| KRH73247 | Soybean | nucleus | 34.63 | 32.52 |
| CDX92463 | Canola | nucleus | 33.25 | 32.33 |
| CDY56857 | Canola | cytosol | 33.17 | 32.25 |
| Bra002302.1-P | Field mustard | cytosol | 32.44 | 32.02 |
| EER92800 | Sorghum | nucleus, plastid | 18.05 | 23.49 |
| KXG24379 | Sorghum | cytosol | 17.8 | 22.58 |
| KXG31163 | Sorghum | nucleus | 20.0 | 19.25 |
| OQU77943 | Sorghum | mitochondrion | 19.76 | 16.67 |
| EER91354 | Sorghum | plastid | 9.84 | 13.63 |
| Os04t0692750-01 | Rice | cytosol | 10.65 | 13.27 |
| KXG27526 | Sorghum | cytosol | 10.89 | 12.76 |
| EES02658 | Sorghum | nucleus | 11.87 | 12.09 |
| EES07568 | Sorghum | nucleus | 9.43 | 11.96 |
| KXG38419 | Sorghum | nucleus | 13.66 | 11.33 |
| KXG22701 | Sorghum | mitochondrion | 11.46 | 6.88 |
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 0.98 | 6.86 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1B6QGH6 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | EnsemblPlants:KXG37026 | ProteinID:KXG37026 | ProteinID:KXG37026.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF792 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3002G428700 | SUPFAM:SSF52540 | UniParc:UPI00081AC1A1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:77479048..77484586
Molecular Weight (calculated)
140024.0 Da
IEP (calculated)
8.076
GRAVY (calculated)
-0.453
Length
1230 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKGSTGHHN NPIGSVPFEA FHNGSWHGVN SIRIRDGALL VKFVSSGSTV QHDIDGSYLR IRSRKATCSD CSHVLKPGAD VCVWQATYGG ETKDSVPLCR
0101: DARLIKIKRN HQLDRCLCLF AVIFYKDQCP GSKEKVISGT IADVVTIDDV CILQNLQSEE LQDGSVQWNS AVDCFHHNRS KLLSARFSLE VAYLIVLSSL
0201: RGMEFSIKLV DGNIIYQIIK GDQARYSIDS MSIPPGFGKS MDIISFKPRA EALRPIIRTV LITQVKEDNL IEDGCTAVKH ESDSAQDVEV LYEHVDIRRS
0301: KRMKTQPDRF TSYDAPNFNR TYNKKEAYGP SNKNENSESD LSFYSSEQTE SSDEEVLGNP GVKKKVSRSF VVKEDPRSMK GQHKYPVKRN QCSLPIKENQ
0401: TSMETKKNAT DQGCSDSHIP HTPAKNIEKC NRPTFRLKSF ASSRSLDGNS EPAFCQKRGR KRKKGMCQRE YKRMIEQCIG NIQCEVERDS DFKIDAQILN
0501: GCGHAYQEED FMWPSSADSQ EEKDELQELW KEMDYALATV AIDEQKQTTD SEADHESNTD LGKRGEHCHH DCMLDEQLGL TCRLCNVVCT EAKDIFPPMF
0601: TGKDHKRLEQ SHFGQDDHVL DLSFFEICAP ESSKSKESGN VWSSIPVLEP KLLAHQRKAF EFIWKNLAGS LQLEEMDDST SRGGCVVAHT PGAGKTLLLI
0701: SFLVSYLKVH PRSRPLVLTP KAAIHTWRRE FQKWGILLPL HVLHHSNRTS KLMRGLSSKL QVVLKNFHQP TWKTMRIMDC LDKLCKWHEE PSILLMTYSS
0801: FLSLTKEDSK LHHQEFITKV LMNNPGLLIL DEGHNPRSNK SKLRKLLMKV KTEFRILLSG TVFQNNFEEY FNTLSLARPR FVNDVMTTLV PESEKKTRSR
0901: TGKHQEALAR RIFVERVGQK IESSSKHDRM DGISLLNDLT HGFIDSFEGT KLNILPGIHV YTLFMKPTDV QEEVLAKLSM PLADNARYLL EIELLITIAS
1001: IHPWLINTTR CASTYFTPAE VARVGKYKRN FAVGCKAKFV IDLLHKSSFR GERVLIFCHN VAPITFLVKL IEIVFGWRLG QEVLVLQGDQ ELPVRSDVMD
1101: KFNSDREGKR KVLIASTTAC AEGISLTGAS RLVMLDSEWN HSKTRQAIAR AFRPGQERMV FVYLLVASGT WEEDKYNSNR RKAWIAKMVF FGRYFDDPMQ
1201: NRVTEIDDEV LKELADEDET NTFHMIVKQD
0101: DARLIKIKRN HQLDRCLCLF AVIFYKDQCP GSKEKVISGT IADVVTIDDV CILQNLQSEE LQDGSVQWNS AVDCFHHNRS KLLSARFSLE VAYLIVLSSL
0201: RGMEFSIKLV DGNIIYQIIK GDQARYSIDS MSIPPGFGKS MDIISFKPRA EALRPIIRTV LITQVKEDNL IEDGCTAVKH ESDSAQDVEV LYEHVDIRRS
0301: KRMKTQPDRF TSYDAPNFNR TYNKKEAYGP SNKNENSESD LSFYSSEQTE SSDEEVLGNP GVKKKVSRSF VVKEDPRSMK GQHKYPVKRN QCSLPIKENQ
0401: TSMETKKNAT DQGCSDSHIP HTPAKNIEKC NRPTFRLKSF ASSRSLDGNS EPAFCQKRGR KRKKGMCQRE YKRMIEQCIG NIQCEVERDS DFKIDAQILN
0501: GCGHAYQEED FMWPSSADSQ EEKDELQELW KEMDYALATV AIDEQKQTTD SEADHESNTD LGKRGEHCHH DCMLDEQLGL TCRLCNVVCT EAKDIFPPMF
0601: TGKDHKRLEQ SHFGQDDHVL DLSFFEICAP ESSKSKESGN VWSSIPVLEP KLLAHQRKAF EFIWKNLAGS LQLEEMDDST SRGGCVVAHT PGAGKTLLLI
0701: SFLVSYLKVH PRSRPLVLTP KAAIHTWRRE FQKWGILLPL HVLHHSNRTS KLMRGLSSKL QVVLKNFHQP TWKTMRIMDC LDKLCKWHEE PSILLMTYSS
0801: FLSLTKEDSK LHHQEFITKV LMNNPGLLIL DEGHNPRSNK SKLRKLLMKV KTEFRILLSG TVFQNNFEEY FNTLSLARPR FVNDVMTTLV PESEKKTRSR
0901: TGKHQEALAR RIFVERVGQK IESSSKHDRM DGISLLNDLT HGFIDSFEGT KLNILPGIHV YTLFMKPTDV QEEVLAKLSM PLADNARYLL EIELLITIAS
1001: IHPWLINTTR CASTYFTPAE VARVGKYKRN FAVGCKAKFV IDLLHKSSFR GERVLIFCHN VAPITFLVKL IEIVFGWRLG QEVLVLQGDQ ELPVRSDVMD
1101: KFNSDREGKR KVLIASTTAC AEGISLTGAS RLVMLDSEWN HSKTRQAIAR AFRPGQERMV FVYLLVASGT WEEDKYNSNR RKAWIAKMVF FGRYFDDPMQ
1201: NRVTEIDDEV LKELADEDET NTFHMIVKQD
0001: MKKRGFYNLK HPFDPCPFEF FCSGTWKPVE YMRIEDGMMT IRLLENGYVL EDIRPFQRLR LRSRKAALSD CICFLRPDID VCVLYRIHED DLEPVWVDAR
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
Arabidopsis Description
CLSY2SNF2 domain-containing protein CLASSY 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K493]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.