CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024677_P003	Maize	cytosol	84.64	86.42
Zm00001d049605_P037	Maize	cytosol	84.74	84.14
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	56.08	80.95
Os06t0255700-01	Rice	cytosol	68.25	69.98
Os08t0243866-00	Rice	endoplasmic reticulum	44.23	66.41
TraesCS2B01G208700.1	Wheat	cytosol	61.96	65.61
TraesCS2D01G189900.1	Wheat	nucleus	62.99	64.18
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	62.78	62.46
Os08t0289400-00	Rice	cytosol, nucleus	32.78	60.23
TraesCS5D01G344400.1	Wheat	nucleus	59.28	60.02
TraesCS5A01G340400.1	Wheat	nucleus	59.28	60.02
HORVU5Hr1G085320.1	Barley	plastid	59.79	59.49
TraesCS2A01G182200.1	Wheat	plastid	63.09	58.9
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	37.53	53.45
VIT_03s0038g04290.t01	Wine grape	nucleus	11.44	50.23
KRH27453	Soybean	cytosol	42.68	46.89
Bra021841.1-P	Field mustard	cytosol	36.7	46.6
AT2G16390.2	Thale cress	nucleus	41.24	44.89
Solyc01g109970.2.1	Tomato	extracellular	41.34	44.21
PGSC0003DMT400079488	Potato	nucleus	41.55	43.57
CDX89710	Canola	nucleus	38.25	42.94
KRH20806	Soybean	cytosol	41.55	42.29
VIT_03s0038g00030.t01	Wine grape	nucleus	41.34	42.17
GSMUA_Achr6P04530_001	Banana	nucleus	37.22	40.7
EER92800	Sorghum	nucleus, plastid	37.53	38.52
Bra000888.1-P	Field mustard	cytosol	16.7	35.29
KXG31163	Sorghum	nucleus	23.51	17.84
KXG37026	Sorghum	nucleus	22.58	17.8
OQU77943	Sorghum	mitochondrion	21.65	14.4
KXG27526	Sorghum	cytosol	14.85	13.71
EER91354	Sorghum	plastid	11.96	13.06
EES07568	Sorghum	nucleus	12.68	12.68
KXG38419	Sorghum	nucleus	16.7	10.92
EES02658	Sorghum	nucleus	12.89	10.35
KXG34530	Sorghum	endoplasmic reticulum, golgi, plasma membrane	1.86	10.29
KXG22701	Sorghum	mitochondrion	12.68	6.01

Protein Annotations

MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A1B6PFB3	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650
InterPro:IPR014001	InterPro:IPR038718	EnsemblPlants:KXG24379	ProteinID:KXG24379	ProteinID:KXG24379.1	ProteinID:KXG24380.1
InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799
PANTHER:PTHR10799:SF807	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	EnsemblPlantsGene:SORBI_3007G034200
SUPFAM:SSF52540	UniParc:UPI00081AC81B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:2997031..3003518

Molecular Weight (calculated)

108759.0 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.427

Length

970 amino acids

Sequence
(BLAST)

001: MSQSPGGGRD AIYYSRQRKL SEHSGSVYTP VAAMYSGGHA LPDANRSPSL VFGSMKKDWD NIRHRKLQLV NFLAGLEAAS GHSALSGKIL DPTELKEKGD
101: IIVLDSDDED GNGSEYNKLA SGVNKDLRTS EVAGNITEKM VSSKRQAFET MHAYGDKNTQ IVPYGQGSAA PIVPYGQGSV SQIVPYGQGS ALVSQFPLQT
201: SWQPSIQFER VVLQKRPEEQ RMQDLVAASI AEKRAETQMF LSLPTEKKRK RSDLSLLMLD SFVPKQRRKS DTGLAAADLS LDLQQPAKSP EPEPEPDMAI
301: EEEEKCKNES DGLEDYWKDF ALAVESTKLD EVDEAANEKE DNGNMEDIDC NHDIRIHEDL GHVCRVCGMI VRRADSIIDY QWKKASRRKT NSYGGHSKDA
401: DEIDCGTVKL SEDFIIADVA IHPRHAQTMK PHQLEGFNFL VKNLIGDKPG GCILAHAPGS GKTFMLISFI QSFMARYPSA RPLVVLPKGI LGTWKKEIQR
501: WQVQDIPLYD FYSVKAEKRV EQLQILKSWE DKMSILFLGY KQFATIVTDD GGSNVTAACR DRLLKVPNLL ILDEGHTPRN RETDVLESLN RVETPRKVVL
601: SGTLFQNHVE EVFNILNLVR PKFLRMESSR PIARRIMSQV EISGRGSKGF ADSAFTEAVE GTLLNDENFK RKAHVIRGLR ELTKDVLHYY KGDILDELPG
701: LVDFSVFLKL TPKQKDIIRN KLESHDRFKR SAVGTALYIH PCLSQLSEVN AENRANTLRD DLVDSLLDSI NVKDGVKANF FMNILSLANS AGEKVLAFSQ
801: YILPMKFFER LLVKMKGWHV GKEIFMISGD TSQEDREVAV DHFNNSADAK VLFGSIKACG EGISLVGASR VVILDVHLNP SVTRQAIGRA FRPGQQKKVF
901: VYRLVAADSD EEKVHETAFK KEVIPKLWFE WSEHCTTEDF KLGQVDIDDS GDELLDTKAI RQDIKALYRR

Best Arabidopsis Sequence Match ( AT2G16390.2 )
(BLAST)

001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R

Arabidopsis Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.