Factsheet for AT2G16390.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89710	Canola	nucleus	76.88	79.28
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	47.36	61.97
VIT_03s0038g04290.t01	Wine grape	nucleus	14.03	56.56
KRH27453	Soybean	cytosol	55.89	56.4
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	41.08	54.46
Solyc01g109970.2.1	Tomato	extracellular	52.19	51.27
KRH20806	Soybean	cytosol	54.66	51.1
VIT_03s0038g00030.t01	Wine grape	nucleus	54.1	50.68
PGSC0003DMT400079488	Potato	nucleus	52.19	50.27
HORVU2Hr1G024970.1	Barley	nucleus	18.18	49.54
Os08t0243866-00	Rice	endoplasmic reticulum	35.91	49.54
AT2G21450.2	Thale cress	nucleus	43.77	47.39
TraesCS2B01G208700.1	Wheat	cytosol	45.23	44.0
TraesCS2D01G189900.1	Wheat	nucleus	45.34	42.44
Os06t0255700-01	Rice	cytosol	44.56	41.97
TraesCS5A01G340400.1	Wheat	nucleus	45.12	41.96
TraesCS5D01G344400.1	Wheat	nucleus	44.78	41.65
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	45.45	41.54
KXG24379	Sorghum	cytosol	44.89	41.24
HORVU5Hr1G085320.1	Barley	plastid	44.67	40.82
Zm00001d024677_P003	Maize	cytosol	43.32	40.63
Zm00001d049605_P037	Maize	cytosol	44.44	40.53
TraesCS4D01G279200.1	Wheat	cytosol	43.21	40.48
TraesCS2B01G164300.3	Wheat	nucleus	43.32	40.38
TraesCS4B01G280600.1	Wheat	nucleus	43.1	40.21
TraesCS2A01G140400.2	Wheat	cytosol	42.99	40.06
GSMUA_Achr6P04530_001	Banana	nucleus	39.39	39.57
AT3G32330.1	Thale cress	cytosol	14.48	39.45
EER92800	Sorghum	nucleus, plastid	41.75	39.37
TraesCS2A01G182200.1	Wheat	plastid	45.34	38.88
TraesCS4A01G022800.1	Wheat	mitochondrion, plastid	43.32	38.76
HORVU4Hr1G074230.3	Barley	nucleus, plastid	42.76	37.13
Os03t0165266-00	Rice	nucleus	42.87	35.57
TraesCS2D01G143100.1	Wheat	cytosol	23.34	33.55
Os08t0289400-00	Rice	cytosol, nucleus	19.75	33.33
AT3G31900.1	Thale cress	cytosol	11.78	26.72
AT3G32280.1	Thale cress	endoplasmic reticulum, plasma membrane	13.69	25.74
AT3G24340.1	Thale cress	nucleus	22.11	17.4
AT5G20420.1	Thale cress	cytosol	23.91	16.89
AT3G42670.4	Thale cress	nucleus	23.23	16.45
AT1G05490.1	Thale cress	mitochondrion, nucleus	23.91	15.11
AT1G03750.1	Thale cress	plastid	13.36	13.81
AT3G19210.1	Thale cress	nucleus	13.47	13.19
AT5G63950.1	Thale cress	cytosol	15.49	12.66
AT1G08600.3	Thale cress	nucleus	16.27	9.8
AT2G18760.3	Thale cress	nucleus	12.79	9.15
AT3G54280.2	Thale cress	mitochondrion	13.47	5.64

Protein Annotations

MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EntrezGene:816136	UniProt:A0A178VR01
UniProt:A0A1P8B0G3	ProteinID:ANM62376.1	ArrayExpress:AT2G16390	EnsemblPlantsGene:AT2G16390	RefSeq:AT2G16390	TAIR:AT2G16390
RefSeq:AT2G16390-TAIR-G	EnsemblPlants:AT2G16390.2	Unigene:At.40283	Symbol:DRD1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	RefSeq:NP_001324537.1	ProteinID:OAP08897.1
InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799
PANTHER:PTHR10799:SF807	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540
UniParc:UPI0007E0EF4B	SEG:seg	:	:	:	:

Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]

Coordinates

chr2:+:7097280..7101351

Molecular Weight (calculated)

100497.0 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.373

Length

891 amino acids

Sequence
(BLAST)

001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.