Factsheet for Os07t0434500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0255700-01	Rice	cytosol	99.26	70.51
Os08t0243866-00	Rice	endoplasmic reticulum	66.52	69.19
TraesCS2B01G208700.1	Wheat	cytosol	79.61	58.41
TraesCS2D01G189900.1	Wheat	nucleus	79.46	56.09
KXG24379	Sorghum	cytosol	80.95	56.08
Zm00001d024677_P003	Maize	cytosol	78.27	55.37
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	56.1	55.36
Os08t0289400-00	Rice	cytosol, nucleus	43.15	54.92
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	79.17	54.56
Zm00001d049605_P037	Maize	cytosol	78.72	54.15
TraesCS5A01G340400.1	Wheat	nucleus	75.74	53.13
TraesCS5D01G344400.1	Wheat	nucleus	75.6	53.03
VIT_03s0038g04290.t01	Wine grape	nucleus	17.26	52.49
HORVU5Hr1G085320.1	Barley	plastid	75.3	51.9
TraesCS2A01G182200.1	Wheat	plastid	79.32	51.3
KRH27453	Soybean	cytosol	60.27	45.87
Bra021841.1-P	Field mustard	cytosol	50.3	44.24
Solyc01g109970.2.1	Tomato	extracellular	57.89	42.89
PGSC0003DMT400079488	Potato	nucleus	57.59	41.84
KRH20806	Soybean	cytosol	59.23	41.76
VIT_03s0038g00030.t01	Wine grape	nucleus	58.48	41.32
AT2G16390.2	Thale cress	nucleus	54.46	41.08
CDX89710	Canola	nucleus	50.6	39.35
GSMUA_Achr6P04530_001	Banana	nucleus	48.51	36.75
Os03t0165266-00	Rice	nucleus	54.02	33.8
Bra000888.1-P	Field mustard	cytosol	22.47	32.9
Os05t0392400-01	Rice	cytosol, nucleus	19.94	29.78
Os07t0692600-01	Rice	mitochondrion	20.83	29.47
Os02t0650800-00	Rice	cytosol	30.65	21.99
Os01t0636700-01	Rice	cytoskeleton, cytosol, nucleus	10.12	14.5
Os05t0247900-01	Rice	plastid	17.11	13.43
Os01t0102800-01	Rice	cytosol, nucleus, plastid	18.01	13.2
Os04t0692750-01	Rice	cytosol	18.45	12.56
Os02t0762800-00	Rice	nucleus	16.96	11.63
Os10t0457700-01	Rice	nucleus	20.98	10.69
Os02t0161200-01	Rice	nucleus	2.68	4.23
Os07t0692500-01	Rice	cytosol	1.04	1.23
Os07t0692401-00	Rice	mitochondrion	0.15	0.21
Os02t0161300-01	Rice	extracellular	0.15	0.2
Os04t0692700-01	Rice	nucleus	0.0	0.0
Os02t0762600-01	Rice	cytosol	0.0	0.0

Protein Annotations

MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A0P0X5H1	ProteinID:BAT01232.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	EnsemblPlantsGene:Os07g0434500	EnsemblPlants:Os07t0434500-01	InterPro:P-loop_NTPase
PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF807
SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI0003938BF4
SEG:seg	:	:	:	:	:

Description

Similar to chromatin remodeling complex subunit. (Os07t0434500-01)

Coordinates

chr7:-:14506007..14510037

Molecular Weight (calculated)

76238.5 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.273

Length

672 amino acids

Sequence
(BLAST)

001: MIEEEKPVKE SDGLEDLWKD FSLAAECTKL DTNEDMSNEK DVDDENEMDD DCNHDIRIHE DLGHVCRICG MIVRKAETII DYQWKKASRT RTNYYESRSK
101: DADDIDTGAV KVSEDFIVSD IAIHPRHAKQ MRPHQLEGFS FLVKNLVGDK PGGCILAHAP GSGKTFMLIS FIQSFLAKYP SARPLVVLPK GILGTWKREF
201: QRWQVEDIPL YDFYSVKADK RTEQLEVLKS WEARMSILFL GYKQFSRIIC GDGDGNIAAA CRDRLLMVPN LLILDEGHTP RNRETDVLAS LKRVQTPRKV
301: VLSGTLFQNH VSEVFNILDL VRPKFLKMES SRPIARRIMS QVAISGIRSL KGVHDSAFTE SVEDTLLNDD NFTRKSHVIR SLRELTKDVL HYYKGDILDE
401: LPGLVDFSVF LKLSTKQKEI VHKIEAYEKF KRSAVGTALY IHPCLSEISE GDAADRATNL TDATVDSLIE SIIIKDGVKA KFFFNILSLA NSAGEKLLAF
501: SQYILPMKFL ERLLVKRLGW HVGKEIFMIS GDTSADDREV AMDQFNNSAD AKVLFGSIKA CGEGISLVGA SRVIILDVHL NPSVTRQAIG RAFRPGQQKK
601: VFVYRLVAAD SPEVKFHETA FKKEVIPKLW FEWSELCTTE DFKLNQVDID DSEDELLEAN AIRQDIKALY RR

Best Arabidopsis Sequence Match ( AT2G16390.1 )
(BLAST)

001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR

Arabidopsis Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.