Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G208700.1 | Wheat | cytosol | 93.17 | 96.83 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 94.33 | 92.1 |
| TraesCS2A01G182200.1 | Wheat | plastid | 96.85 | 88.74 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 56.09 | 79.46 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 75.0 | 74.53 |
| Os06t0255700-01 | Rice | cytosol | 68.07 | 68.5 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 44.54 | 65.63 |
| KXG24379 | Sorghum | cytosol | 64.18 | 62.99 |
| Zm00001d024677_P003 | Maize | cytosol | 62.5 | 62.63 |
| Zm00001d049605_P037 | Maize | cytosol | 63.45 | 61.82 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 31.51 | 56.82 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 39.08 | 54.63 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 11.66 | 50.23 |
| KRH27453 | Soybean | cytosol | 43.59 | 47.0 |
| Bra021841.1-P | Field mustard | cytosol | 36.45 | 45.42 |
| AT2G16390.2 | Thale cress | nucleus | 42.44 | 45.34 |
| CDX89710 | Canola | nucleus | 40.13 | 44.21 |
| Solyc01g109970.2.1 | Tomato | extracellular | 42.12 | 44.21 |
| PGSC0003DMT400079488 | Potato | nucleus | 42.23 | 43.46 |
| KRH20806 | Soybean | cytosol | 43.38 | 43.34 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 42.54 | 42.59 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 38.55 | 41.38 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 40.97 | 41.01 |
| Bra000888.1-P | Field mustard | cytosol | 16.91 | 35.08 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 22.48 | 34.52 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 20.9 | 18.32 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 23.42 | 17.56 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 23.0 | 17.44 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 11.76 | 16.69 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 5.25 | 15.29 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 23.21 | 14.88 |
| TraesCS2D01G202400.1 | Wheat | plastid | 13.13 | 14.42 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 13.45 | 13.4 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 8.82 | 12.57 |
| TraesCS6D01G300900.1 | Wheat | cytosol | 12.5 | 11.24 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 17.23 | 10.98 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 13.13 | 10.24 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 12.82 | 5.9 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF807 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2D01G189900 | EnsemblPlants:TraesCS2D01G189900.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:133744718..133753941
Molecular Weight (calculated)
107231.0 Da
IEP (calculated)
6.427
GRAVY (calculated)
-0.452
Length
952 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAPGEEPP AAPSGMYYHR KRKPSDPISG ISLPSAKMVG NWGFGSVTKD WESMHARKLE FMNFLSTLRK PTQSYVASAE ANMINSSVEH TEEKNSEVLI
101: ILDSDNEDES MAAYKQLTPA KNKQLPSEKN KQLIPSEQAG TLPARVASQG IADVNETMRD GDQNSHIVPY GQSATLMNQY HLPRYQPSVQ FERVVLQERP
201: EEERVHYLAV ASHAEKMAET LLFPALPKER KQRKYDPSSQ TDGDAEAGPR KRKRKGKNEA GAPVFDLPSE TYNPVEEDEP MEEVDKPENE SDGLDGFWNE
301: YSLALESSKL DTPEEADSEK EVGEKEVDNG CSHDIRIHED LGHVCRVCGM IVRRADMIFD YQWKKPSRSR SYFSETRSKD SDDIVIGDVR VTEELMALDV
401: AIHPRHAKQM RAHQLAGFHF LVKNLVSDKP GGCILAHAPG SGKTFMLISF IQSFLAKYPS SRPLVILPKG ILGTWKREFQ RWQVEDIPLY DFYSVKAEKR
501: AEQLEILKSW QAKMSILFLG YKQFSQIVCS DGGGNVAAAC RDMLLKVPGL LIMDEGHTPR NRETDVLESL SRVLTPRKVV LSGTLFQNHV SEVFNILNLV
601: RPKFLKSDSS RPIVKRIMSQ VAISGGRISK GAADNAFTES IEETLLHDDN FTRKAHVIRS LRELTKDVLH YYKGDILDEL PGLIDFSVFL KLSPKQKEIV
701: HKLESYEKFK RSAVGTAVYM HPCLSGMSEV DAADRAINLT DASIDSLVES INVTDGVKAR FFTNILALAN SAGEKVLAFG QYILPMKFLE RLLVKTRGWN
801: VGKEIFVING DTSQEERELA MDQFNNSADA KVLFGSIRAC GEGISLVGAS RIVILDVHLN PSVTRQAIGR AFRPGQQKKV FVYRLVAADS QEESFHQTAF
901: KKEVIPKLWF EWSEQHCTSD DFRLNKVDID DCEDELLDNK AMRQDIKVLY KR
101: ILDSDNEDES MAAYKQLTPA KNKQLPSEKN KQLIPSEQAG TLPARVASQG IADVNETMRD GDQNSHIVPY GQSATLMNQY HLPRYQPSVQ FERVVLQERP
201: EEERVHYLAV ASHAEKMAET LLFPALPKER KQRKYDPSSQ TDGDAEAGPR KRKRKGKNEA GAPVFDLPSE TYNPVEEDEP MEEVDKPENE SDGLDGFWNE
301: YSLALESSKL DTPEEADSEK EVGEKEVDNG CSHDIRIHED LGHVCRVCGM IVRRADMIFD YQWKKPSRSR SYFSETRSKD SDDIVIGDVR VTEELMALDV
401: AIHPRHAKQM RAHQLAGFHF LVKNLVSDKP GGCILAHAPG SGKTFMLISF IQSFLAKYPS SRPLVILPKG ILGTWKREFQ RWQVEDIPLY DFYSVKAEKR
501: AEQLEILKSW QAKMSILFLG YKQFSQIVCS DGGGNVAAAC RDMLLKVPGL LIMDEGHTPR NRETDVLESL SRVLTPRKVV LSGTLFQNHV SEVFNILNLV
601: RPKFLKSDSS RPIVKRIMSQ VAISGGRISK GAADNAFTES IEETLLHDDN FTRKAHVIRS LRELTKDVLH YYKGDILDEL PGLIDFSVFL KLSPKQKEIV
701: HKLESYEKFK RSAVGTAVYM HPCLSGMSEV DAADRAINLT DASIDSLVES INVTDGVKAR FFTNILALAN SAGEKVLAFG QYILPMKFLE RLLVKTRGWN
801: VGKEIFVING DTSQEERELA MDQFNNSADA KVLFGSIRAC GEGISLVGAS RIVILDVHLN PSVTRQAIGR AFRPGQQKKV FVYRLVAADS QEESFHQTAF
901: KKEVIPKLWF EWSEQHCTSD DFRLNKVDID DCEDELLDNK AMRQDIKVLY KR
001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.