Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 97.24 | 96.98 |
TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 96.9 | 96.38 |
Os05t0392400-01 | Rice | cytosol, nucleus | 28.35 | 93.56 |
HORVU1Hr1G062970.3 | Barley | mitochondrion | 91.45 | 91.63 |
Solyc08g077650.1.1 | Tomato | cytosol | 2.36 | 67.31 |
Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 63.37 | 65.57 |
OQU77943 | Sorghum | mitochondrion | 62.76 | 63.92 |
GSMUA_Achr7P06840_001 | Banana | nucleus | 33.8 | 53.23 |
VIT_02s0012g00110.t01 | Wine grape | cytosol | 21.21 | 48.84 |
PGSC0003DMT400033315 | Potato | nucleus | 4.71 | 48.28 |
Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 5.66 | 48.28 |
PGSC0003DMT400088837 | Potato | cytosol | 6.13 | 48.15 |
Solyc08g077580.1.1 | Tomato | cytosol | 5.52 | 47.4 |
Solyc03g061640.1.1 | Tomato | cytosol | 5.12 | 45.78 |
CDX77430 | Canola | nucleus | 20.67 | 45.62 |
Solyc01g068300.1.1 | Tomato | cytosol | 11.72 | 44.62 |
Solyc08g077610.1.1 | Tomato | nucleus | 19.93 | 44.25 |
CDY59589 | Canola | nucleus | 5.19 | 43.75 |
CDY29038 | Canola | nucleus | 5.19 | 43.75 |
Solyc04g054440.1.1 | Tomato | nucleus | 19.26 | 43.66 |
Solyc01g068320.1.1 | Tomato | cytosol | 19.6 | 43.56 |
PGSC0003DMT400017302 | Potato | nucleus | 18.05 | 43.02 |
Solyc02g033050.1.1 | Tomato | nucleus | 18.11 | 42.77 |
Solyc08g062000.1.1 | Tomato | cytosol | 11.25 | 42.71 |
PGSC0003DMT400096321 | Potato | nucleus | 3.57 | 42.4 |
Solyc08g061350.1.1 | Tomato | mitochondrion | 2.02 | 42.25 |
PGSC0003DMT400090992 | Potato | mitochondrion | 6.94 | 42.04 |
Solyc08g061410.1.1 | Tomato | cytosol | 12.32 | 41.69 |
Solyc08g062060.1.1 | Tomato | nucleus | 2.96 | 41.51 |
Solyc08g077690.2.1 | Tomato | nucleus | 19.8 | 39.68 |
Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 6.4 | 39.42 |
Solyc01g060460.1.1 | Tomato | nucleus | 20.13 | 39.29 |
Solyc08g061370.1.1 | Tomato | cytosol | 4.58 | 39.08 |
Solyc08g061340.1.1 | Tomato | cytosol | 5.72 | 38.12 |
KRH39939 | Soybean | nucleus | 15.76 | 37.93 |
PGSC0003DMT400085993 | Potato | cytosol | 4.24 | 37.5 |
Solyc08g077600.1.1 | Tomato | cytosol | 9.63 | 36.39 |
CDX93009 | Canola | nucleus | 23.5 | 35.98 |
Solyc08g061390.1.1 | Tomato | cytosol | 5.99 | 35.89 |
CDX94823 | Canola | nucleus | 23.37 | 35.63 |
Solyc08g062070.1.1 | Tomato | cytosol | 3.16 | 35.34 |
Solyc08g061990.1.1 | Tomato | mitochondrion | 9.16 | 35.32 |
PGSC0003DMT400004629 | Potato | nucleus | 21.08 | 35.09 |
Bra015035.1-P | Field mustard | nucleus | 24.44 | 34.84 |
PGSC0003DMT400004673 | Potato | nucleus | 21.41 | 34.72 |
CDY66441 | Canola | nucleus | 24.11 | 34.66 |
Bra001944.1-P | Field mustard | nucleus | 23.97 | 33.4 |
Solyc08g077670.1.1 | Tomato | cytosol | 10.17 | 33.33 |
PGSC0003DMT400085944 | Potato | cytosol | 5.19 | 32.77 |
TraesCS2D01G053900.1 | Wheat | nucleus | 23.84 | 32.6 |
PGSC0003DMT400004672 | Potato | nucleus | 21.82 | 32.56 |
AT3G24340.1 | Thale cress | nucleus | 23.7 | 31.1 |
KRH23851 | Soybean | mitochondrion, nucleus | 24.38 | 31.05 |
TraesCS3D01G231800.1 | Wheat | nucleus | 26.46 | 30.94 |
KRH46527 | Soybean | nucleus | 23.7 | 30.66 |
PGSC0003DMT400037430 | Potato | nucleus | 13.8 | 30.51 |
PGSC0003DMT400017313 | Potato | nucleus | 23.77 | 29.29 |
KRH46528 | Soybean | cytosol, extracellular, nucleus | 23.84 | 28.41 |
PGSC0003DMT400038789 | Potato | nucleus | 20.54 | 27.58 |
CDY47279 | Canola | nucleus | 24.24 | 26.93 |
AT1G05490.1 | Thale cress | mitochondrion, nucleus | 25.52 | 26.88 |
CDY10115 | Canola | nucleus | 24.65 | 26.54 |
Bra015430.1-P | Field mustard | nucleus | 25.12 | 23.56 |
TraesCS2D01G189900.1 | Wheat | nucleus | 14.88 | 23.21 |
TraesCS5D01G344400.1 | Wheat | nucleus | 14.75 | 22.86 |
TraesCS4D01G279200.1 | Wheat | cytosol | 13.27 | 20.71 |
TraesCS2D01G087600.1 | Wheat | nucleus | 16.43 | 19.43 |
TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 3.84 | 17.43 |
TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 7.68 | 16.99 |
TraesCS2D01G143100.1 | Wheat | cytosol | 6.67 | 15.97 |
TraesCS2D01G202400.1 | Wheat | plastid | 8.15 | 13.96 |
TraesCS2D01G568400.1 | Wheat | cytosol | 8.82 | 13.72 |
TraesCS7D01G144700.1 | Wheat | cytosol | 5.93 | 13.17 |
TraesCS3D01G082200.2 | Wheat | nucleus | 10.64 | 12.94 |
TraesCS6D01G300900.1 | Wheat | cytosol | 9.23 | 12.94 |
TraesCS1D01G143000.1 | Wheat | nucleus | 12.39 | 12.32 |
TraesCS1D01G450200.1 | Wheat | mitochondrion | 10.91 | 7.83 |
Protein Annotations
MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
PANTHER:PTHR10799 | PANTHER:PTHR10799:SF937 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1D01G245400 | EnsemblPlants:TraesCS1D01G245400.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr1D:+:336547338..336552767
Molecular Weight (calculated)
165510.0 Da
IEP (calculated)
5.821
GRAVY (calculated)
-0.747
Length
1485 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRAARRRAR AGGGAPAAPS TRARRRDDAG TIVIDLDGEA PAAAAAASRR SSSSSSSAAA MPVPLVGAVA TRTRSRGLAI HPPAPEEAPR PKRRRKGATS
0101: ADADGGGGSK GAGSSKSETR PNRRGRPPRA SVKSKEAEAE ADAPACGDWV EVSRRYGCDD SARRGDDASG DDNGESRADE ACGIGQGRDE HHSAASGNRI
0201: NEHQGSGAVN GSNSCHAMNE VVSGDAAGLK GRGGEGGGLG GGFHVDEEHM NEEDTVGCGD RELPTADAMM GDEAAASEDD FGDYYDDEMM EERLVADLIR
0301: AYSNGGNLEA SNGAYGDGGD LEEAEDEMGF TDDGDDDDSM HDADECGMSE PINDDAKAPN NADAKAGTQD PVDHKVVAGE VRCHEEEEED VIKDEVETKR
0401: EGATGFNQGR SHIEILDSDE EVKVLNDASK ALKRKPLPRK KEPVVPCVAW RTRSLWGLKQ DRLSYNAYFE ELSDEPEEED DSEVELDDED DDSADDDNSA
0501: SHDSEVELEE EDAKKKAKEE EEAEMRKHKK EIASSSAKIR AGPLPLYTNT GKRIRKATPN SCNNSKRRRR IQTHHRIDSS DDEIIDHTVA DGFKWEVHKK
0601: PGIQPLNFDK DGSEGPVGND ITQHQKQTHF TWDLERRKRL KLETTTKERQ LFERHLDSDS SPSSSDQNKR HGDDSQTGKE KKHLSSKSGK SAKKSSRSGS
0701: KTLKRQSLLK LLMDKISGDK DGGFSPFDQH PQFDYNFKDP HPLVFSFGTE NSTPADIPEQ NAKQNMLWGD FDFALESENI GTYYDDEHQG ESNVLDLGLP
0801: SKTPCSRGKH EFIIDDQIGI RCKYCSLVNL EIRFVLPSMV SNYAEKTPWR NGSYLKEALM YHDLCEQAGS VDGQSQDFHL YGTVWDLIPG VITSMYQHQR
0901: EAFEFMWTNL VGDIRLDELK HGAKPDVVGG CVICHAPGTG KTRLAIVFIQ TYMKVFPDCR PVIIAPRGML FAWEEEFKKW DVNVPFHIMN TTDFSGKEDR
1001: DICRLIKKEH RTEKLTRLVK LLSWNKGHGI LGISYGLYMK LTSEKKSGCT EGNKVRTILL ENPGLLVLDE GHTPRNERSI MWKTLGKVKT EKRIILSGTP
1101: FQNNFLELYN ILCLVRPRFG EMFLTEKKVG RRHYVSKKRQ DKFSDKYEKG VWASLTSNVT DDNAEKVRSI LKPFVHIHNG TILRTLPGLR ESVIVLKPPP
1201: LQKSIIRKVE NIGSGNNFEH EYVISLASTH PSLVTAINMS EEEASLIDKP MLERLRSNPY EGVKTRFVIE VVRLCEALKE KVLIFSQFIQ PLELIKEHLS
1301: KLFKWRVGKE ILQMDGKIQP RYRQTSIEVF NNPDSDAKVL LASTRACCEG ISLTGASRVV LLDVVWNPAV GRQAISRAFR IGQKKFVYTY NLITYGTGEG
1401: DKYDRQAEKD HLSKLVFSQE DEFNNVRNML SKAEMDHCSK LISQDKVLEE MASHDQLKGM FLKIHYPPTE SNMVFTYNQI APELS
0101: ADADGGGGSK GAGSSKSETR PNRRGRPPRA SVKSKEAEAE ADAPACGDWV EVSRRYGCDD SARRGDDASG DDNGESRADE ACGIGQGRDE HHSAASGNRI
0201: NEHQGSGAVN GSNSCHAMNE VVSGDAAGLK GRGGEGGGLG GGFHVDEEHM NEEDTVGCGD RELPTADAMM GDEAAASEDD FGDYYDDEMM EERLVADLIR
0301: AYSNGGNLEA SNGAYGDGGD LEEAEDEMGF TDDGDDDDSM HDADECGMSE PINDDAKAPN NADAKAGTQD PVDHKVVAGE VRCHEEEEED VIKDEVETKR
0401: EGATGFNQGR SHIEILDSDE EVKVLNDASK ALKRKPLPRK KEPVVPCVAW RTRSLWGLKQ DRLSYNAYFE ELSDEPEEED DSEVELDDED DDSADDDNSA
0501: SHDSEVELEE EDAKKKAKEE EEAEMRKHKK EIASSSAKIR AGPLPLYTNT GKRIRKATPN SCNNSKRRRR IQTHHRIDSS DDEIIDHTVA DGFKWEVHKK
0601: PGIQPLNFDK DGSEGPVGND ITQHQKQTHF TWDLERRKRL KLETTTKERQ LFERHLDSDS SPSSSDQNKR HGDDSQTGKE KKHLSSKSGK SAKKSSRSGS
0701: KTLKRQSLLK LLMDKISGDK DGGFSPFDQH PQFDYNFKDP HPLVFSFGTE NSTPADIPEQ NAKQNMLWGD FDFALESENI GTYYDDEHQG ESNVLDLGLP
0801: SKTPCSRGKH EFIIDDQIGI RCKYCSLVNL EIRFVLPSMV SNYAEKTPWR NGSYLKEALM YHDLCEQAGS VDGQSQDFHL YGTVWDLIPG VITSMYQHQR
0901: EAFEFMWTNL VGDIRLDELK HGAKPDVVGG CVICHAPGTG KTRLAIVFIQ TYMKVFPDCR PVIIAPRGML FAWEEEFKKW DVNVPFHIMN TTDFSGKEDR
1001: DICRLIKKEH RTEKLTRLVK LLSWNKGHGI LGISYGLYMK LTSEKKSGCT EGNKVRTILL ENPGLLVLDE GHTPRNERSI MWKTLGKVKT EKRIILSGTP
1101: FQNNFLELYN ILCLVRPRFG EMFLTEKKVG RRHYVSKKRQ DKFSDKYEKG VWASLTSNVT DDNAEKVRSI LKPFVHIHNG TILRTLPGLR ESVIVLKPPP
1201: LQKSIIRKVE NIGSGNNFEH EYVISLASTH PSLVTAINMS EEEASLIDKP MLERLRSNPY EGVKTRFVIE VVRLCEALKE KVLIFSQFIQ PLELIKEHLS
1301: KLFKWRVGKE ILQMDGKIQP RYRQTSIEVF NNPDSDAKVL LASTRACCEG ISLTGASRVV LLDVVWNPAV GRQAISRAFR IGQKKFVYTY NLITYGTGEG
1401: DKYDRQAEKD HLSKLVFSQE DEFNNVRNML SKAEMDHCSK LISQDKVLEE MASHDQLKGM FLKIHYPPTE SNMVFTYNQI APELS
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.