Factsheet for Solyc08g077670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062080.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	18.1	68.91
Solyc08g061420.1.1	Tomato	cytosol	13.02	66.29
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	23.18	60.34
Solyc08g061370.1.1	Tomato	cytosol	22.96	59.77
Solyc03g061640.1.1	Tomato	cytosol	20.53	56.02
Solyc08g062070.1.1	Tomato	cytosol	15.01	51.13
Solyc08g077600.1.1	Tomato	cytosol	43.27	49.87
Solyc08g061350.1.1	Tomato	mitochondrion	7.73	49.3
Solyc08g061340.1.1	Tomato	cytosol	22.74	46.19
Solyc08g061390.1.1	Tomato	cytosol	24.94	45.56
Solyc08g062060.1.1	Tomato	nucleus	10.15	43.4
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	20.53	38.59
Solyc04g054440.1.1	Tomato	nucleus	54.53	37.71
Solyc08g077690.2.1	Tomato	nucleus	60.04	36.71
Solyc01g068320.1.1	Tomato	cytosol	53.64	36.38
PGSC0003DMT400085944	Potato	cytosol	18.76	36.17
Solyc08g077610.1.1	Tomato	nucleus	52.1	35.28
Solyc01g060460.1.1	Tomato	nucleus	58.94	35.09
Solyc08g062000.1.1	Tomato	cytosol	29.58	34.27
Solyc02g033050.1.1	Tomato	nucleus	46.58	33.55
Solyc08g061410.1.1	Tomato	cytosol	28.04	28.93
Zm00001d047708_P001	Maize	cytosol	8.39	22.09
Solyc08g061990.1.1	Tomato	mitochondrion	18.54	21.82
Solyc01g068300.1.1	Tomato	cytosol	18.1	21.03
VIT_02s0012g00110.t01	Wine grape	cytosol	28.26	19.84
Os02t0650800-00	Rice	cytosol	32.23	15.58
GSMUA_Achr7P06840_001	Banana	nucleus	29.36	14.1
TraesCS3A01G220700.1	Wheat	nucleus	32.23	13.83
TraesCS3B01G251000.1	Wheat	nucleus	31.79	13.57
TraesCS3A01G238800.1	Wheat	nucleus	31.57	13.53
Os05t0392400-01	Rice	cytosol, nucleus	13.24	13.33
KRH23851	Soybean	mitochondrion, nucleus	33.33	12.95
AT3G24340.1	Thale cress	nucleus	31.79	12.72
KRH46527	Soybean	nucleus	30.91	12.2
TraesCS6A01G241100.1	Wheat	nucleus	29.36	11.68
TraesCS3D01G231800.1	Wheat	nucleus	32.67	11.65
KRH46528	Soybean	cytosol, extracellular, nucleus	31.57	11.48
KXG31163	Sorghum	nucleus	32.01	11.35
TraesCS2D01G053900.1	Wheat	nucleus	26.93	11.23
Solyc04g056400.2.1	Tomato	cytosol, nucleus, plastid	9.05	11.11
KRH39939	Soybean	nucleus	15.01	11.02
AT1G05490.1	Thale cress	mitochondrion, nucleus	32.45	10.43
TraesCS1A01G245700.1	Wheat	mitochondrion, nucleus	33.55	10.21
TraesCS1D01G245400.1	Wheat	nucleus	33.33	10.17
TraesCS1B01G256700.1	Wheat	mitochondrion, nucleus	33.33	10.11
OQU77943	Sorghum	mitochondrion	32.45	10.08
Solyc01g109970.2.1	Tomato	extracellular	19.87	9.92
Solyc06g050510.2.1	Tomato	nucleus	25.39	8.94
Solyc04g050150.2.1	Tomato	nucleus	15.89	5.92
Solyc07g053870.2.1	Tomato	plastid	10.82	5.52
Solyc09g066480.2.1	Tomato	nucleus	14.79	5.52
Solyc01g068280.2.1	Tomato	nucleus	12.14	4.53
Solyc08g074500.2.1	Tomato	cytosol, nucleus, plastid	12.14	4.34
Solyc04g056410.2.1	Tomato	nucleus	1.55	1.19
Solyc08g077580.1.1	Tomato	cytosol	0.44	1.16
Solyc04g050160.2.1	Tomato	nucleus	0.66	0.95
Os02t0161300-01	Rice	extracellular	0.88	0.78
Solyc08g077650.1.1	Tomato	cytosol	0.0	0.0
Solyc08g074520.1.1	Tomato	nucleus	0.0	0.0
Os02t0762600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc08g077670.1.1	EnsemblPlantsGene:Solyc08g077670.1	Gene3D:3.40.50.10810	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase	InterPro:SNF2-like_sf
InterPro:SNF2_N	ncoils:Coil	PANTHER:PTHR10799	PANTHER:PTHR10799:SF858	PFAM:PF00176	PFscan:PS51192
SEG:seg	SUPFAM:SSF52540	UniParc:UPI000276C698	UniProt:K4CNC6	MapMan:16.10.1.2	:

Description

No Description!

Coordinates

chr8:-:61579342..61580944

Molecular Weight (calculated)

52466.4 Da

IEP (calculated)

5.590

GRAVY (calculated)

-0.677

Length

453 amino acids

Sequence
(BLAST)

001: MKDPAETENQ NKGRTYFLRP RYMDRSKSMN EESSDDEDSD EEGSDHEDCD DQNKLSPPEE KEHVPVKETI PLVFRFEDED PVPPVKEEYE KEIEDYFAEM
101: KMCLLEKRIS LTNSSPVLQM QSEKLSDCQM GNHKLKLDEQ IGHICPICSN VILEMKYIFP DFARRPRQRH RRKYLRESPS IFRASDSSAD QDSAIYEEEG
201: TVWDLVSPNV KAAMYPHQRG GFEYMWKHIA GAIKFERLRE KTRLTIVFLQ SLLKIYPKSR LIIITPSSLL LNWEAEFQKW EVDIPFYNLN RKDFSSQEEE
301: ATVRVFGCLS DAGRKDTQFI HLVKNLTVED GEVNAKVIRE ILLKSPGLLV LEEGHTARNE NSRVWKALKK VETEKRILLS GIPFQNNIKE FYNTLSIVCP
401: KFTANSEQKW ASPSSSIDNN PRALKELRDI IAPIVHTCTE DVKKGSLPGL KVQ

Best Arabidopsis Sequence Match ( AT1G05490.1 )
(BLAST)

0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP

Arabidopsis Description

CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.