Factsheet for Solyc08g061370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g061420.1.1	Tomato	cytosol	44.83	87.64
Solyc08g062080.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	56.32	82.35
Solyc08g062060.1.1	Tomato	nucleus	33.91	55.66
Solyc03g061640.1.1	Tomato	cytosol	32.76	34.34
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.46	30.46
Solyc08g061390.1.1	Tomato	cytosol	35.63	25.0
Solyc08g077600.1.1	Tomato	cytosol	54.02	23.92
Solyc08g077670.1.1	Tomato	cytosol	59.77	22.96
Solyc08g061350.1.1	Tomato	mitochondrion	9.2	22.54
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	27.59	19.92
Solyc04g054440.1.1	Tomato	nucleus	69.54	18.47
Solyc01g068320.1.1	Tomato	cytosol	68.39	17.81
Solyc08g061340.1.1	Tomato	cytosol	21.84	17.04
Solyc08g077610.1.1	Tomato	nucleus	64.37	16.74
Solyc02g033050.1.1	Tomato	nucleus	59.2	16.38
Solyc01g060460.1.1	Tomato	nucleus	66.67	15.24
Zm00001d047708_P001	Maize	cytosol	14.94	15.12
Solyc08g077690.2.1	Tomato	nucleus	64.37	15.11
PGSC0003DMT400085944	Potato	cytosol	18.39	13.62
VIT_02s0012g00110.t01	Wine grape	cytosol	45.4	12.25
Solyc08g062000.1.1	Tomato	cytosol	27.01	12.02
Solyc08g061410.1.1	Tomato	cytosol	26.44	10.48
Solyc04g056400.2.1	Tomato	cytosol, nucleus, plastid	20.69	9.76
KRH39939	Soybean	nucleus	34.48	9.72
Os02t0650800-00	Rice	cytosol	41.38	7.68
TraesCS3A01G220700.1	Wheat	nucleus	40.23	6.63
AT3G24340.1	Thale cress	nucleus	43.1	6.63
TraesCS3B01G251000.1	Wheat	nucleus	40.23	6.6
TraesCS3A01G238800.1	Wheat	nucleus	38.51	6.34
KRH46527	Soybean	nucleus	40.8	6.18
GSMUA_Achr7P06840_001	Banana	nucleus	33.33	6.15
TraesCS6A01G241100.1	Wheat	nucleus	40.23	6.15
KRH23851	Soybean	mitochondrion, nucleus	40.8	6.09
TraesCS2D01G053900.1	Wheat	nucleus	36.78	5.89
KRH46528	Soybean	cytosol, extracellular, nucleus	41.38	5.78
Solyc08g077650.1.1	Tomato	cytosol	1.72	5.77
KXG31163	Sorghum	nucleus	41.95	5.71
TraesCS3D01G231800.1	Wheat	nucleus	40.23	5.51
Solyc08g061990.1.1	Tomato	mitochondrion	12.07	5.45
AT1G05490.1	Thale cress	mitochondrion, nucleus	43.1	5.32
Solyc01g109970.2.1	Tomato	extracellular	26.44	5.07
TraesCS1D01G245400.1	Wheat	nucleus	39.08	4.58
TraesCS1A01G245700.1	Wheat	mitochondrion, nucleus	39.08	4.57
TraesCS1B01G256700.1	Wheat	mitochondrion, nucleus	39.08	4.55
Solyc08g062070.1.1	Tomato	cytosol	3.45	4.51
OQU77943	Sorghum	mitochondrion	36.21	4.32
Solyc06g050510.2.1	Tomato	nucleus	31.61	4.27
Solyc07g053870.2.1	Tomato	plastid	18.97	3.72
Solyc04g050150.2.1	Tomato	nucleus	24.71	3.53
Solyc09g066480.2.1	Tomato	nucleus	20.11	2.89
Solyc01g068280.2.1	Tomato	nucleus	18.97	2.72
Solyc08g074500.2.1	Tomato	cytosol, nucleus, plastid	17.24	2.37
Solyc01g068300.1.1	Tomato	cytosol	3.45	1.54
Os05t0392400-01	Rice	cytosol, nucleus	3.45	1.33
Solyc04g050160.2.1	Tomato	nucleus	2.3	1.27
Solyc08g077580.1.1	Tomato	cytosol	0.57	0.58
Solyc04g056410.2.1	Tomato	nucleus	0.57	0.17
Os02t0762600-01	Rice	cytosol	0.0	0.0
Os02t0161300-01	Rice	extracellular	0.0	0.0
Solyc08g074520.1.1	Tomato	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc08g061370.1.1	EnsemblPlantsGene:Solyc08g061370.1	Gene3D:3.40.50.10810	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:IPR038718	InterPro:P-loop_NTPase	InterPro:SNF2-like_sf	InterPro:SNF2_N	PANTHER:PTHR10799
PANTHER:PTHR10799:SF858	PFAM:PF00176	SUPFAM:SSF52540	UniParc:UPI000276AC93	UniProt:K4CKS6	MapMan:35.1

Description

No Description!

Coordinates

chr8:-:48610396..48610920

Molecular Weight (calculated)

20051.4 Da

IEP (calculated)

10.533

GRAVY (calculated)

-0.300

Length

174 amino acids

Sequence
(BLAST)

001: MWDLVSQNIK VAMNPHQYGG FKFMWKHIAG AIKFQRLREP LSKSRGGCII SHPPGTGKTR LNIVFLQSLL KIYPKSRLAI IAPSSLLINW ETEFHKWEVK
101: IPFYNLNSKN FSSQEEEATV RVFRYLSDAG RKDNQPIRLL KLKSWDGTNS VLGISYDLFR NLTVKNVDVN DNVI

Best Arabidopsis Sequence Match ( AT1G05490.1 )
(BLAST)

0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP

Arabidopsis Description

CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.