Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026641 | Potato | nucleus | 96.37 | 96.37 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 19.13 | 84.06 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 53.09 | 70.23 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 69.17 | 68.38 |
| CDX92882 | Canola | nucleus | 62.57 | 67.23 |
| KRH19578 | Soybean | nucleus | 67.85 | 67.18 |
| CDY51705 | Canola | nucleus | 64.06 | 67.04 |
| Bra024192.1-P | Field mustard | nucleus | 63.89 | 66.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.37 | 63.96 |
| EES02658 | Sorghum | nucleus | 62.65 | 62.91 |
| AT2G18760.3 | Thale cress | nucleus | 64.22 | 62.52 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 61.34 | 60.98 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 60.92 | 60.52 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 61.01 | 59.97 |
| Zm00001d040203_P003 | Maize | cytosol | 61.42 | 59.27 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 61.25 | 58.18 |
| Solyc08g077650.1.1 | Tomato | cytosol | 1.48 | 34.62 |
| Solyc07g053870.2.1 | Tomato | plastid | 17.89 | 24.46 |
| Solyc08g077580.1.1 | Tomato | cytosol | 3.38 | 23.7 |
| Solyc08g061420.1.1 | Tomato | cytosol | 1.73 | 23.6 |
| Solyc01g068300.1.1 | Tomato | cytosol | 7.58 | 23.59 |
| Solyc04g056410.2.1 | Tomato | nucleus | 10.72 | 22.15 |
| Solyc03g061640.1.1 | Tomato | cytosol | 2.97 | 21.69 |
| Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 3.05 | 21.26 |
| Solyc08g062080.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 2.06 | 21.01 |
| Solyc01g068280.2.1 | Tomato | nucleus | 20.86 | 20.82 |
| Solyc08g062000.1.1 | Tomato | cytosol | 6.51 | 20.2 |
| Solyc08g061370.1.1 | Tomato | cytosol | 2.89 | 20.11 |
| Solyc08g061410.1.1 | Tomato | cytosol | 7.17 | 19.82 |
| Solyc04g054440.1.1 | Tomato | nucleus | 10.55 | 19.54 |
| Solyc02g033050.1.1 | Tomato | nucleus | 10.06 | 19.4 |
| Solyc08g077610.1.1 | Tomato | nucleus | 10.55 | 19.13 |
| Solyc01g068320.1.1 | Tomato | cytosol | 10.47 | 19.01 |
| Solyc08g061340.1.1 | Tomato | cytosol | 3.38 | 18.39 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 1.07 | 18.31 |
| Solyc08g062070.1.1 | Tomato | cytosol | 1.98 | 18.05 |
| Solyc08g062060.1.1 | Tomato | nucleus | 1.57 | 17.92 |
| Solyc08g077690.2.1 | Tomato | nucleus | 10.88 | 17.81 |
| Solyc04g050150.2.1 | Tomato | nucleus | 17.56 | 17.5 |
| Solyc08g061990.1.1 | Tomato | mitochondrion | 5.52 | 17.4 |
| Solyc01g060460.1.1 | Tomato | nucleus | 10.72 | 17.08 |
| Solyc08g074500.2.1 | Tomato | cytosol, nucleus, plastid | 17.48 | 16.72 |
| Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 3.3 | 16.6 |
| Solyc08g077600.1.1 | Tomato | cytosol | 5.36 | 16.54 |
| Solyc04g056400.2.1 | Tomato | cytosol, nucleus, plastid | 4.62 | 15.18 |
| Solyc08g061390.1.1 | Tomato | cytosol | 3.05 | 14.92 |
| Solyc08g077670.1.1 | Tomato | cytosol | 5.52 | 14.79 |
| Solyc01g109970.2.1 | Tomato | extracellular | 9.81 | 13.12 |
| Solyc06g050510.2.1 | Tomato | nucleus | 11.54 | 10.88 |
| Solyc04g050160.2.1 | Tomato | nucleus | 1.81 | 6.98 |
| Solyc08g074520.1.1 | Tomato | nucleus | 2.14 | 3.96 |
Protein Annotations
| MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | UniProt:K4CUS3 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc09g066480.2 | EnsemblPlants:Solyc09g066480.2.1 | UniParc:UPI000276AD66 |
| SEG:seg | : | : | : | : | : |
Description
Protein CHROMATIN REMODELING 8 [Source:Projected from Arabidopsis thaliana (AT2G18760) UniProtKB/Swiss-Prot;Acc:Q9ZV43]
Coordinates
chr9:+:64896035..64904772
Molecular Weight (calculated)
135806.0 Da
IEP (calculated)
6.290
GRAVY (calculated)
-0.592
Length
1213 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEEEDKIL LSSLGVTSAN PEDIERDVLD QATRHVGEGN EATGIAEEEI EERKEEKEEG HDKKLDLFNK LRAVEVEIDA IKDGFEHLER FRRNEEEFSD
0101: TDDCSEATHT ENEQRTIQAP LDDSNLQHAL ADDRLRSLLE TKAQLREELS IFANDTSSDA LIRALVKDQP KSKRKVKEVQ KSSNKKSKRR KTALLVDDDD
0201: FDAVLAAASS GFVETERDAL VRKGILTPFH KLKGFERRID GAESSGRQSA AADTNSKDDD LASTSIAKAV QSISQAAQAR PSTKLLDSAS LPKLDAPAHP
0301: FQRLRKPLKI PQWLEITTEK NGEFTRKKKR PLPSKKWRKL ASREQRQEEG SDVNTSSHED NTEDTEDVES SFVALEGGFR IPETIFNKLF DYQKVGVQWL
0401: WELHCQRAGG IIGDEMGLGK TIQVLSFLGS LHFSEMYKPS IIICPVTLLR QWKREAKTWC PSFHVEILHD SAHDLSSKKK QSDSESDYES EDLLDSETEG
0501: KKSSRTSKKW DPVIARVVRS NSGLLITTYE QLRLLGEKLL DIEWGYAVLD EGHRIRNPNA EVTLVCKQLQ TVHRIIMTGA PIQNKLSELW SLFDFVFPGK
0601: LGVLPVFEAE FAVPISVGGY ANATPLQVST AYRCAVVLRD LIMPYLLRRM KADVNANLPK KAEHVLFCSL TKEQRSVYRA FLASSEVEQI FDGSRNSLSG
0701: IDVMRKICNH PDLLEREHSS TDPDYGNPER SGKMKVVAEV LKVWKEQGHR VLLFSQTQQM LDILERFLVT CEYNYRRMDG VTPVKQRMVL IDEFNNTDDI
0801: FIFILTTKVG GLGTNLTGAN RVIIFDPDWN PSTDMQARER AWRIGQKKDV TVYRLITRGT IEEKVYHRQI YKHFLTNKIL KNPQQRRFFK ARDMKDLFTL
0901: NDDGNGGSTE TSSIFSQVSV DVNIVGAPDS QERLSFQAPV AKDDNSKIGE ADNSDPKGKA GDDNNNGELD EETSILRGLF DAHGIHSAMN HDAIMNAHDE
1001: EKLKLEEQAS QVAQRAAEAL RQSRMLRSRE GVAVPTWTGK SGAAGGPSSA KKKFGSTVNP QLTSKSSEES LNGYDAIRGN AFPAGASAGK ALSSAELLAK
1101: IRGNQEKAVS DGLVHQFGTP ASTSNSRAGS VSNGNRSASS SSVVQPEVLV RQICTFIQQR GGKTTSASIV DYFRDRIPSK DLPLFKNLLK EIAILEKNPS
1201: GSFWVLKPEY QDQ
0101: TDDCSEATHT ENEQRTIQAP LDDSNLQHAL ADDRLRSLLE TKAQLREELS IFANDTSSDA LIRALVKDQP KSKRKVKEVQ KSSNKKSKRR KTALLVDDDD
0201: FDAVLAAASS GFVETERDAL VRKGILTPFH KLKGFERRID GAESSGRQSA AADTNSKDDD LASTSIAKAV QSISQAAQAR PSTKLLDSAS LPKLDAPAHP
0301: FQRLRKPLKI PQWLEITTEK NGEFTRKKKR PLPSKKWRKL ASREQRQEEG SDVNTSSHED NTEDTEDVES SFVALEGGFR IPETIFNKLF DYQKVGVQWL
0401: WELHCQRAGG IIGDEMGLGK TIQVLSFLGS LHFSEMYKPS IIICPVTLLR QWKREAKTWC PSFHVEILHD SAHDLSSKKK QSDSESDYES EDLLDSETEG
0501: KKSSRTSKKW DPVIARVVRS NSGLLITTYE QLRLLGEKLL DIEWGYAVLD EGHRIRNPNA EVTLVCKQLQ TVHRIIMTGA PIQNKLSELW SLFDFVFPGK
0601: LGVLPVFEAE FAVPISVGGY ANATPLQVST AYRCAVVLRD LIMPYLLRRM KADVNANLPK KAEHVLFCSL TKEQRSVYRA FLASSEVEQI FDGSRNSLSG
0701: IDVMRKICNH PDLLEREHSS TDPDYGNPER SGKMKVVAEV LKVWKEQGHR VLLFSQTQQM LDILERFLVT CEYNYRRMDG VTPVKQRMVL IDEFNNTDDI
0801: FIFILTTKVG GLGTNLTGAN RVIIFDPDWN PSTDMQARER AWRIGQKKDV TVYRLITRGT IEEKVYHRQI YKHFLTNKIL KNPQQRRFFK ARDMKDLFTL
0901: NDDGNGGSTE TSSIFSQVSV DVNIVGAPDS QERLSFQAPV AKDDNSKIGE ADNSDPKGKA GDDNNNGELD EETSILRGLF DAHGIHSAMN HDAIMNAHDE
1001: EKLKLEEQAS QVAQRAAEAL RQSRMLRSRE GVAVPTWTGK SGAAGGPSSA KKKFGSTVNP QLTSKSSEES LNGYDAIRGN AFPAGASAGK ALSSAELLAK
1101: IRGNQEKAVS DGLVHQFGTP ASTSNSRAGS VSNGNRSASS SSVVQPEVLV RQICTFIQQR GGKTTSASIV DYFRDRIPSK DLPLFKNLLK EIAILEKNPS
1201: GSFWVLKPEY QDQ
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.