Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 21.55 | 95.65 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 70.78 | 70.66 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 52.82 | 70.56 |
| CDX92882 | Canola | nucleus | 63.18 | 68.56 |
| Bra024192.1-P | Field mustard | nucleus | 64.73 | 68.3 |
| CDY51705 | Canola | nucleus | 64.57 | 68.25 |
| PGSC0003DMT400026641 | Potato | nucleus | 67.27 | 67.93 |
| Solyc09g066480.2.1 | Tomato | nucleus | 67.18 | 67.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.96 | 64.14 |
| AT2G18760.3 | Thale cress | nucleus | 65.22 | 64.13 |
| EES02658 | Sorghum | nucleus | 62.12 | 63.0 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 61.06 | 61.31 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 60.82 | 61.02 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 61.06 | 60.62 |
| Zm00001d040203_P003 | Maize | cytosol | 61.55 | 59.98 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 61.06 | 58.57 |
| KRH05276 | Soybean | cytosol, nucleus | 6.61 | 32.66 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 18.94 | 29.59 |
| KRH25617 | Soybean | nucleus | 17.8 | 25.06 |
| KRH40956 | Soybean | nucleus | 20.57 | 24.47 |
| KRH77966 | Soybean | nucleus | 15.67 | 21.33 |
| KRH34128 | Soybean | nucleus | 15.84 | 17.18 |
| KRH39939 | Soybean | nucleus | 8.57 | 17.02 |
| KRG92726 | Soybean | nucleus | 18.04 | 14.88 |
| KRH27453 | Soybean | cytosol | 9.8 | 13.59 |
| KRH20806 | Soybean | cytosol | 9.71 | 12.49 |
| KRH23851 | Soybean | mitochondrion, nucleus | 11.76 | 12.35 |
| KRH46527 | Soybean | nucleus | 11.02 | 11.76 |
| KRG97679 | Soybean | nucleus | 11.76 | 11.66 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 11.76 | 11.56 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 11.18 | 11.37 |
| KRH73247 | Soybean | nucleus | 11.76 | 10.99 |
| KRH23760 | Soybean | mitochondrion | 18.04 | 10.8 |
| KRH40039 | Soybean | mitochondrion | 17.96 | 10.75 |
| KRH77275 | Soybean | cytosol | 0.49 | 6.52 |
| KRH28211 | Soybean | mitochondrion | 0.49 | 6.52 |
Protein Annotations
| EntrezGene:100820025 | MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02008191 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_13G124600 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1LYM1 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| EnsemblPlants:KRH19578 | ProteinID:KRH19578 | ProteinID:KRH19578.1 | ProteinID:KRH19579.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI00023CFAA9 | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:23802193..23809467
Molecular Weight (calculated)
137388.0 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.636
Length
1225 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEEDRILL SSLGVKSANP EDIERDVLEK ATRNDLVTVT EVEGSAKEER SDLPENVDPS ANDKAEIRQK LRAVQFEIDA VASAVERLSN VEDNEECSDA
0101: GEDGPGRGTA EGESDGNSNL QRALAADRLR SLEKTKAQLE KELLDLFKDD DSKSAEHEEL VLSLVKEERK SKRKVKEDKK LNKSAGKRPK KVSFDEDADF
0201: DAVLDAASAG FVETERDELV RKGILTPFHK LEGFERRFQQ PETSTSHNAA EEENDGDLAS ASIERAARSM SEAARSRPTT KLLEPEAAPK LDAPTIPFRR
0301: LKKPLKSSKP LDVELNKDSK RKKRRPLPGR KWTKRVSCED SHPEESENTN GCLDSSSCEN LEEQDVELDD QESSYVTLEG GLKIPDNIFE ALFDYQKVGV
0401: QWLWELHCQR AGGIIGDEMG LGKTVQVLSF LGALHFSGMY KPSIIVCPVT LLRQWKREAK KWYPKFHVEL LHDSAQDSAP RKKRAKSEET DYESNSKSDS
0501: DYEKSVASKS TRKWESLINR VMRSESGLLI TTYEQLRILG EQLLDIQWGY AVLDEGHRIR NPNAEVTLVC KQLQTVHRII MTGAPIQNKL TELWSLFDFV
0601: FPGKLGVLPV FEAEFSVPIS VGGYANASPL QVSTAYRCAV VLRDLIMPYL LRRMKADVNA QLPKKTEHVL FCSLTSEQVS AYRAFLASTD VEQILDGHRN
0701: SLYGIDVMRK ICNHPDLLER DHAFNDPDYG NPERSGKMKV VAQVLNVWKE QGHRVLLFTQ TQQMLNIFEN FLTTSGHIYR RMDGLTPVKQ RMALIDEFND
0801: SSEIFIFILT TKVGGLGTNL TGANRVIIFD PDWNPSTDMQ ARERAWRIGQ KRDVTVYRLI TRGTIEEKVY HRQIYKHFLT NKILKNPQQK RFFKARDMKD
0901: LFTLNVDGET GSTETSNIFS QISEEVNVIG TYKENKDKYK HSQTAELVSE DVAVGNDDKS ERGSLRGKGK EKVEHEHSNG VGEETNILKS LFDANGIHSA
1001: MNHDLIMNAH DEEKIRLEEQ ASQVAQRAAE ALRQSRMLRS HDSVSVPTWT GRSGTAGAPS SVKRKFGSTV NPQLVNNSKA SDELPNKGTN KINGFAAAGA
1101: SAGKALSSAE LLAQIRGNQE KAIGAGLEHQ FGVSSSSTNQ PRSGDVRSSR ATENSSVQPE VLIRKICTFI QQRGGSSDSA SIVQYFKDRI PSKDLALFKN
1201: LLKEIATLHK GSNGSYWVLK PDYQF
0101: GEDGPGRGTA EGESDGNSNL QRALAADRLR SLEKTKAQLE KELLDLFKDD DSKSAEHEEL VLSLVKEERK SKRKVKEDKK LNKSAGKRPK KVSFDEDADF
0201: DAVLDAASAG FVETERDELV RKGILTPFHK LEGFERRFQQ PETSTSHNAA EEENDGDLAS ASIERAARSM SEAARSRPTT KLLEPEAAPK LDAPTIPFRR
0301: LKKPLKSSKP LDVELNKDSK RKKRRPLPGR KWTKRVSCED SHPEESENTN GCLDSSSCEN LEEQDVELDD QESSYVTLEG GLKIPDNIFE ALFDYQKVGV
0401: QWLWELHCQR AGGIIGDEMG LGKTVQVLSF LGALHFSGMY KPSIIVCPVT LLRQWKREAK KWYPKFHVEL LHDSAQDSAP RKKRAKSEET DYESNSKSDS
0501: DYEKSVASKS TRKWESLINR VMRSESGLLI TTYEQLRILG EQLLDIQWGY AVLDEGHRIR NPNAEVTLVC KQLQTVHRII MTGAPIQNKL TELWSLFDFV
0601: FPGKLGVLPV FEAEFSVPIS VGGYANASPL QVSTAYRCAV VLRDLIMPYL LRRMKADVNA QLPKKTEHVL FCSLTSEQVS AYRAFLASTD VEQILDGHRN
0701: SLYGIDVMRK ICNHPDLLER DHAFNDPDYG NPERSGKMKV VAQVLNVWKE QGHRVLLFTQ TQQMLNIFEN FLTTSGHIYR RMDGLTPVKQ RMALIDEFND
0801: SSEIFIFILT TKVGGLGTNL TGANRVIIFD PDWNPSTDMQ ARERAWRIGQ KRDVTVYRLI TRGTIEEKVY HRQIYKHFLT NKILKNPQQK RFFKARDMKD
0901: LFTLNVDGET GSTETSNIFS QISEEVNVIG TYKENKDKYK HSQTAELVSE DVAVGNDDKS ERGSLRGKGK EKVEHEHSNG VGEETNILKS LFDANGIHSA
1001: MNHDLIMNAH DEEKIRLEEQ ASQVAQRAAE ALRQSRMLRS HDSVSVPTWT GRSGTAGAPS SVKRKFGSTV NPQLVNNSKA SDELPNKGTN KINGFAAAGA
1101: SAGKALSSAE LLAQIRGNQE KAIGAGLEHQ FGVSSSSTNQ PRSGDVRSSR ATENSSVQPE VLIRKICTFI QQRGGSSDSA SIVQYFKDRI PSKDLALFKN
1201: LLKEIATLHK GSNGSYWVLK PDYQF
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.