Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73247 | Soybean | nucleus | 93.69 | 86.18 |
| KRG97679 | Soybean | nucleus | 59.5 | 58.06 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 53.61 | 50.91 |
| AT5G20420.1 | Thale cress | cytosol | 52.7 | 50.36 |
| AT3G42670.4 | Thale cress | nucleus | 52.03 | 49.84 |
| Bra002302.1-P | Field mustard | cytosol | 51.54 | 49.84 |
| CDX92463 | Canola | nucleus | 51.45 | 49.01 |
| CDY56857 | Canola | cytosol | 51.45 | 49.01 |
| Bra021058.1-P | Field mustard | nucleus | 51.29 | 48.62 |
| Solyc06g050510.2.1 | Tomato | nucleus | 49.71 | 46.54 |
| PGSC0003DMT400061540 | Potato | nucleus | 49.54 | 46.42 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 33.44 | 37.31 |
| KXG37026 | Sorghum | nucleus | 32.61 | 31.95 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 32.7 | 31.17 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 32.37 | 31.1 |
| TraesCS2A01G089500.1 | Wheat | plastid | 32.45 | 31.01 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 32.12 | 30.81 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 32.03 | 28.94 |
| KRH39939 | Soybean | nucleus | 12.86 | 25.12 |
| KRH27453 | Soybean | cytosol | 17.18 | 23.44 |
| KRH23851 | Soybean | mitochondrion, nucleus | 20.83 | 21.53 |
| KRH46527 | Soybean | nucleus | 20.5 | 21.52 |
| KRH20806 | Soybean | cytosol | 16.68 | 21.09 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 4.73 | 20.65 |
| KRH05276 | Soybean | cytosol, nucleus | 4.23 | 20.56 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 20.5 | 19.82 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 10.04 | 15.43 |
| Os04t0692750-01 | Rice | cytosol | 12.12 | 14.79 |
| KRH25617 | Soybean | nucleus | 10.29 | 14.25 |
| KRH40956 | Soybean | nucleus | 11.12 | 13.01 |
| KRH77966 | Soybean | nucleus | 9.46 | 12.67 |
| KRH34128 | Soybean | nucleus | 11.87 | 12.67 |
| KRH19578 | Soybean | nucleus | 11.37 | 11.18 |
| KRG92726 | Soybean | nucleus | 13.69 | 11.11 |
| KRH23760 | Soybean | mitochondrion | 12.03 | 7.08 |
| KRH40039 | Soybean | mitochondrion | 11.95 | 7.03 |
| KRH77275 | Soybean | cytosol | 0.41 | 5.43 |
| KRH28211 | Soybean | mitochondrion | 0.41 | 5.43 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A0R0E2N1 | EnsemblPlantsGene:GLYMA_U0272001 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KRG88505 | ProteinID:KRG88505 | ProteinID:KRG88505.1 | ProteinID:KRG88506.1 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF792 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0006ED9549 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_265:+:8613..13682
Molecular Weight (calculated)
138206.0 Da
IEP (calculated)
8.682
GRAVY (calculated)
-0.519
Length
1205 amino acids
Sequence
(BLAST)
(BLAST)
0001: VWADAKISSV QRKPHDSECS CQFYVNFYVH QGSLGAELRT LSREIKVVGI NQISILQKLE STPCENQHYR WASSEDCSII SHTKLLLGKV LCDLSWLVVT
0101: TALKKVSICV RSLQDKLVYQ VLGRDTVSTS LNNESHIDVV NFKTDKGMLV PIVSQVATLK TKRVDPEQES HEDKESPSYN VEGLRRSKRR NVQPERYLGC
0201: EKVSQIDVGS FRNLPPVKID TWKDNDIDHE MYIPLAGLFR WQKKCLEGDT DNHQKVKKVS TCRELVVYKR KKTKSQKVRS GGDDQNEHQN HLAIIPLPAQ
0301: HDPVEVIHCD DLYDKVTRSY GNESSEISSK YHHLTGTTSK KNDVKLLTFE SHYHAAKSDD GEKSDDLSWR YHYSYGAPKS QRKGLSDLDD MVNLGNKWEG
0401: ISSSKVVKGK KHRTTYFGSR DHGEEKRYNY KDRSLNAAAY KDLINSYLKN INTRPTNEEP AIADQWKQTE TPSSIGQKTE TEVLRKEEAE EESEMDMLWR
0501: ELEVSLASCY LEEDTEDSNA AVFTETLENP NAGCPHDFRM NEEIGIYCYR CGFVSTEIKY ITPPFIQHSV WHQEEKQIPE EDSKTKANED DDIDLLPALD
0601: SPEKPVSQEN DNVWVLIPEL KAKLHAHQKK AFEFLWQNIA GSMDPGLMEA ASKRRGGCVV SHTPGAGKTF LIIAFLVSYL KLFPGKRPLV LAPKTTLYTW
0701: YKEFIKWDIP IPVYLIHGRR TYRVFKQKSS IVIPGVPKPT DDVKHVLDCL EKIQKWHSHP SVLIMGYTSF LTLMREDSKF AHRKYMAKVL RESPGVMVLD
0801: EGHNPRSTKS RLRKVLMKVQ TELRILLSGT LFQNNFCEYF NTLCLARPKF IHEVLKALDP KYKRKGKVAK KASHLLESRA RKFFLDQIAK KIDSSNGRER
0901: RKGLKMLRNV TNGFIDVYEG GSSDGLPGLQ IYTLLMNSTD TQHEILHELH KKMAKVNGYP LELELLITLG SIHPWLVKSA VCAEKFFTQA QLMELEKCKF
1001: DLRIGSKVKF VLSLIYRVVK KEKVLIFCHN IAPVKLFVEY FEKYFGWTKG REVLVLTGEL ELFERGRVMD KFEEPGGVAK ILLASITACA EGISLTAASR
1101: VIMLDSEWNP SKTKQAIARA FRPGQQKVVY VYQLLVTGSL EEDKYKRTTW KEWVSSMIFS EAFVEDPSQW QAEKIEDDIL REMVAEDRSK SFHMIMKNEK
1201: ASTNK
0101: TALKKVSICV RSLQDKLVYQ VLGRDTVSTS LNNESHIDVV NFKTDKGMLV PIVSQVATLK TKRVDPEQES HEDKESPSYN VEGLRRSKRR NVQPERYLGC
0201: EKVSQIDVGS FRNLPPVKID TWKDNDIDHE MYIPLAGLFR WQKKCLEGDT DNHQKVKKVS TCRELVVYKR KKTKSQKVRS GGDDQNEHQN HLAIIPLPAQ
0301: HDPVEVIHCD DLYDKVTRSY GNESSEISSK YHHLTGTTSK KNDVKLLTFE SHYHAAKSDD GEKSDDLSWR YHYSYGAPKS QRKGLSDLDD MVNLGNKWEG
0401: ISSSKVVKGK KHRTTYFGSR DHGEEKRYNY KDRSLNAAAY KDLINSYLKN INTRPTNEEP AIADQWKQTE TPSSIGQKTE TEVLRKEEAE EESEMDMLWR
0501: ELEVSLASCY LEEDTEDSNA AVFTETLENP NAGCPHDFRM NEEIGIYCYR CGFVSTEIKY ITPPFIQHSV WHQEEKQIPE EDSKTKANED DDIDLLPALD
0601: SPEKPVSQEN DNVWVLIPEL KAKLHAHQKK AFEFLWQNIA GSMDPGLMEA ASKRRGGCVV SHTPGAGKTF LIIAFLVSYL KLFPGKRPLV LAPKTTLYTW
0701: YKEFIKWDIP IPVYLIHGRR TYRVFKQKSS IVIPGVPKPT DDVKHVLDCL EKIQKWHSHP SVLIMGYTSF LTLMREDSKF AHRKYMAKVL RESPGVMVLD
0801: EGHNPRSTKS RLRKVLMKVQ TELRILLSGT LFQNNFCEYF NTLCLARPKF IHEVLKALDP KYKRKGKVAK KASHLLESRA RKFFLDQIAK KIDSSNGRER
0901: RKGLKMLRNV TNGFIDVYEG GSSDGLPGLQ IYTLLMNSTD TQHEILHELH KKMAKVNGYP LELELLITLG SIHPWLVKSA VCAEKFFTQA QLMELEKCKF
1001: DLRIGSKVKF VLSLIYRVVK KEKVLIFCHN IAPVKLFVEY FEKYFGWTKG REVLVLTGEL ELFERGRVMD KFEEPGGVAK ILLASITACA EGISLTAASR
1101: VIMLDSEWNP SKTKQAIARA FRPGQQKVVY VYQLLVTGSL EEDKYKRTTW KEWVSSMIFS EAFVEDPSQW QAEKIEDDIL REMVAEDRSK SFHMIMKNEK
1201: ASTNK
0001: MKKRGFYNLK HPFDPCPFEF FCSGTWKPVE YMRIEDGMMT IRLLENGYVL EDIRPFQRLR LRSRKAALSD CICFLRPDID VCVLYRIHED DLEPVWVDAR
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
Arabidopsis Description
CLSY2SNF2 domain-containing protein CLASSY 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K493]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.