Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34128 | Soybean | nucleus | 72.46 | 95.31 |
| Solyc04g050150.2.1 | Tomato | nucleus | 52.93 | 64.58 |
| AT1G08600.3 | Thale cress | nucleus | 60.74 | 60.99 |
| CDX95047 | Canola | nucleus | 59.6 | 59.8 |
| CDX93550 | Canola | nucleus | 59.33 | 59.01 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 53.47 | 53.18 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 53.67 | 53.17 |
| KXG38419 | Sorghum | nucleus | 53.06 | 53.14 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 53.06 | 52.96 |
| Zm00001d032801_P005 | Maize | nucleus | 52.46 | 52.49 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 53.6 | 50.16 |
| Bra018612.1-P | Field mustard | nucleus | 59.33 | 34.0 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 6.13 | 32.97 |
| KRH05276 | Soybean | cytosol, nucleus | 4.98 | 29.84 |
| KRH77966 | Soybean | nucleus | 14.01 | 23.11 |
| KRH25617 | Soybean | nucleus | 13.0 | 22.18 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 11.65 | 22.07 |
| KRH39939 | Soybean | nucleus | 8.55 | 20.58 |
| KRH40956 | Soybean | nucleus | 13.13 | 18.93 |
| KRH19578 | Soybean | nucleus | 14.88 | 18.04 |
| KRH27453 | Soybean | cytosol | 10.03 | 16.87 |
| KRH20806 | Soybean | cytosol | 9.9 | 15.43 |
| KRH46527 | Soybean | nucleus | 11.65 | 15.07 |
| KRH23851 | Soybean | mitochondrion, nucleus | 11.78 | 15.01 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 12.12 | 14.45 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 11.11 | 13.69 |
| KRG97679 | Soybean | nucleus | 11.38 | 13.68 |
| KRH73247 | Soybean | nucleus | 11.31 | 12.82 |
| KRH40039 | Soybean | mitochondrion | 15.42 | 11.19 |
| KRH23760 | Soybean | mitochondrion | 15.42 | 11.19 |
| KRH77275 | Soybean | cytosol | 0.07 | 1.09 |
| KRH28211 | Soybean | mitochondrion | 0.07 | 1.09 |
Protein Annotations
| EntrezGene:100818409 | MapMan:12.4.1.3.2 | Gene3D:3.40.50.10810 | UniProt:A0A0R0EFC2 | EMBL:ACUP02012766 | InterPro:ADD |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_20G227200 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR025766 | InterPro:IPR038718 |
| ProteinID:KRG92725.1 | EnsemblPlants:KRG92726 | ProteinID:KRG92726 | ProteinID:KRG92726.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51533 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF843 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000233DD97 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:46144174..46189849
Molecular Weight (calculated)
168224.0 Da
IEP (calculated)
5.826
GRAVY (calculated)
-0.572
Length
1485 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGKTEDEVV DIESASSGSS NDDSDDEESL VPEIDDGMRL GESLTEEEIQ DLISELLEVE SKAAEAQEAL EEESLSKVES EVRQELKQNL QGDDLETAVA
0101: DEMATFKEEW EAVLDDLETE SAHLLEQLDG AGIELPSLYK LIEREAPNVC STEAWKKRNH WVGSLATAEI SESIADAEKH LQVNRPVRRR HGKLLEEGAS
0201: GFLQKRLCDE SQEPVKNEGD WDLFNKIVSD GSGTDASFGS KHWASVYLAS TPQQAALMGL KFPGVDEVEE IDDVDGNSTD PFIAAAIANE RELDLSDEQR
0301: RQFKKVKEED DAIVDRKLQI RLKHRRQKRK SKQREMSTPM LLTENHIQKP SFVDNLSPAV NEGTSDDGKI VSDSGKDACV LMEADKIKVF DASHHVDKEK
0401: LTSTGGLSDD IEQRGIKRVN SGELDADNKK CRIVVIDSNN EAEVTENKLD CNTQEVKEDL CNNGGASLPS ECLDEKFWCT VCDKVALEVH PHPFLKVITC
0501: GDCNCLLKEK THKKDQGQDC SEGYCTWCGG SSELVCCKLC KILFCTKCLK KNIGVELVPG VEDTSWHCCC CHPNLLQKLS LQLAKAVGAA DLIVSSSGSD
0601: SDSSDDSDNS DDSDDSDAKV NVTISSKRRH KKKIRRILDD AELGEETKRK IAIEKERQER LKSLRGQFSA SSFEMSSDGC NGNLSESASV EVLGDAVAGY
0701: IVNVVREKGE EAVRIPPSIS AKLKAHQITG IRFMWENIIQ SIRKVKSGDK GLGCILAHTM GLGKTFQVIA FLYTAMRCVD LGLRTVLIVT PVNVLHNWRQ
0801: EFIKWRPSEL KPLRVFMLED VSRDRRAELL AKWRSKGGVF LIGYAAFRNL SFGKHVKDRH MAREICHALQ DGPDILVCDE AHMIKNTKAD VTQALKQVKC
0901: QRRIALTGSP LQNNLMEYYC MVDFVREGFL GSSHEFRNRF QNPIENGQHT NSTLIDVKIM NQRSHILYEQ LKGFVQRMDM NVVKKDLPPK TVFVITVKLS
1001: PLQRKLYKRF LDVHGFTTQV HPEMLRKRCF FAGYQALARI WNHPGILQLT KEVKDYVKHE DAVENFLVDD SYSDENSDYN VLAGEKMRYG NDLLQRKDDN
1101: GFFLKGWWND LLHGKIYKEI DHSGKMVLLM EILTMSSDVG DKVLVFSQSI PTLDLIELYL SRIPRRGKQG KFWKKGKDWY RLDGRTESSE RQKLVERFNE
1201: PLNKRVKCTL ISTRAGSLGI NLHAANRVVI VDGSWNPTYD LQAIYRSWRY GQKKPVFAYR LLAHGTMEEK IYKRQVTKEG LAARVVDRQQ VHRTISKEEM
1301: LHLFELGDDD NPETLADLSQ ENEHQDNPIL VGHSLKHTAP HSNGSSYSDK LMESLLSKHH PRWIANFHEH ESLLQENEEE KLSKEEQDMA WEVYQKSLEW
1401: EEVQRVPLGE SIMPEQKPEM PNAMPQNVSE SCSILPTKLS RRFTTRKCTN LAHMLTLRSQ GTKFGCSTVC GECAQEIRWE DLKKR
0101: DEMATFKEEW EAVLDDLETE SAHLLEQLDG AGIELPSLYK LIEREAPNVC STEAWKKRNH WVGSLATAEI SESIADAEKH LQVNRPVRRR HGKLLEEGAS
0201: GFLQKRLCDE SQEPVKNEGD WDLFNKIVSD GSGTDASFGS KHWASVYLAS TPQQAALMGL KFPGVDEVEE IDDVDGNSTD PFIAAAIANE RELDLSDEQR
0301: RQFKKVKEED DAIVDRKLQI RLKHRRQKRK SKQREMSTPM LLTENHIQKP SFVDNLSPAV NEGTSDDGKI VSDSGKDACV LMEADKIKVF DASHHVDKEK
0401: LTSTGGLSDD IEQRGIKRVN SGELDADNKK CRIVVIDSNN EAEVTENKLD CNTQEVKEDL CNNGGASLPS ECLDEKFWCT VCDKVALEVH PHPFLKVITC
0501: GDCNCLLKEK THKKDQGQDC SEGYCTWCGG SSELVCCKLC KILFCTKCLK KNIGVELVPG VEDTSWHCCC CHPNLLQKLS LQLAKAVGAA DLIVSSSGSD
0601: SDSSDDSDNS DDSDDSDAKV NVTISSKRRH KKKIRRILDD AELGEETKRK IAIEKERQER LKSLRGQFSA SSFEMSSDGC NGNLSESASV EVLGDAVAGY
0701: IVNVVREKGE EAVRIPPSIS AKLKAHQITG IRFMWENIIQ SIRKVKSGDK GLGCILAHTM GLGKTFQVIA FLYTAMRCVD LGLRTVLIVT PVNVLHNWRQ
0801: EFIKWRPSEL KPLRVFMLED VSRDRRAELL AKWRSKGGVF LIGYAAFRNL SFGKHVKDRH MAREICHALQ DGPDILVCDE AHMIKNTKAD VTQALKQVKC
0901: QRRIALTGSP LQNNLMEYYC MVDFVREGFL GSSHEFRNRF QNPIENGQHT NSTLIDVKIM NQRSHILYEQ LKGFVQRMDM NVVKKDLPPK TVFVITVKLS
1001: PLQRKLYKRF LDVHGFTTQV HPEMLRKRCF FAGYQALARI WNHPGILQLT KEVKDYVKHE DAVENFLVDD SYSDENSDYN VLAGEKMRYG NDLLQRKDDN
1101: GFFLKGWWND LLHGKIYKEI DHSGKMVLLM EILTMSSDVG DKVLVFSQSI PTLDLIELYL SRIPRRGKQG KFWKKGKDWY RLDGRTESSE RQKLVERFNE
1201: PLNKRVKCTL ISTRAGSLGI NLHAANRVVI VDGSWNPTYD LQAIYRSWRY GQKKPVFAYR LLAHGTMEEK IYKRQVTKEG LAARVVDRQQ VHRTISKEEM
1301: LHLFELGDDD NPETLADLSQ ENEHQDNPIL VGHSLKHTAP HSNGSSYSDK LMESLLSKHH PRWIANFHEH ESLLQENEEE KLSKEEQDMA WEVYQKSLEW
1401: EEVQRVPLGE SIMPEQKPEM PNAMPQNVSE SCSILPTKLS RRFTTRKCTN LAHMLTLRSQ GTKFGCSTVC GECAQEIRWE DLKKR
0001: MEANEESLKG KIEKLEGKEV IVESKEDEMD IIIEENREAE QEVMEVKARD GRGEQNDVLM EENNNQGEQK DEEMQDASSR SESSDFNSDE DEQILSRRDD
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
Arabidopsis Description
ATRXCHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.