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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH02540
KRH19405
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92308 Canola nucleus 68.33 67.51
CDX99258 Canola nucleus 67.89 67.36
Bra022395.1-P Field mustard nucleus 68.33 67.36
AT3G19210.1 Thale cress nucleus 68.0 67.25
HORVU1Hr1G071540.2 Barley nucleus 20.0 65.93
Solyc04g056410.2.1 Tomato nucleus 43.0 65.93
HORVU7Hr1G119270.3 Barley nucleus 20.44 65.71
GSMUA_Achr5P24600_001 Banana nucleus 66.33 63.92
VIT_03s0063g00580.t01 Wine grape nucleus 68.78 63.29
EES07568 Sorghum nucleus 66.33 61.55
TraesCS6A01G321200.1 Wheat nucleus 66.11 61.15
Zm00001d018151_P003 Maize nucleus 65.67 61.05
HORVU6Hr1G078680.2 Barley nucleus 66.22 61.0
Solyc04g056400.2.1 Tomato cytosol, nucleus, plastid 25.0 60.98
Os02t0762800-00 Rice nucleus 66.33 60.92
TraesCS6B01G351900.1 Wheat nucleus 66.0 59.22
TraesCS6D01G300900.1 Wheat cytosol 66.22 56.28
KRH32203 Soybean cytosol, mitochondrion, nucleus 10.44 34.06
KRH05276 Soybean cytosol, nucleus 7.67 27.82
KRH59600 Soybean cytosol, nucleus, plastid 19.67 22.58
KRH25617 Soybean nucleus 20.11 20.8
KRH34128 Soybean nucleus 22.22 17.71
KRH40956 Soybean nucleus 19.56 17.09
KRH39939 Soybean nucleus 11.0 16.05
KRH19578 Soybean nucleus 21.33 15.67
KRH27453 Soybean cytosol 13.78 14.04
KRG92726 Soybean nucleus 23.11 14.01
KRH20806 Soybean cytosol 13.67 12.91
KRH46527 Soybean nucleus 14.22 11.15
KRH23851 Soybean mitochondrion, nucleus 14.11 10.89
KRH46528 Soybean cytosol, extracellular, nucleus 14.44 10.43
KRG97679 Soybean nucleus 13.11 9.55
KRG88505 Soybean endoplasmic reticulum, nucleus 12.67 9.46
KRH23760 Soybean mitochondrion 20.22 8.89
KRH40039 Soybean mitochondrion 20.0 8.79
KRH73247 Soybean nucleus 12.78 8.78
KRH77275 Soybean cytosol 0.33 3.26
KRH28211 Soybean mitochondrion 0.33 3.26
Protein Annotations
Gene3D:1.20.120.850MapMan:12.4.1.3.1Gene3D:3.40.50.10810Gene3D:3.40.50.300EMBL:ACUP02000686EnsemblPlantsGene:GLYMA_01G244700
GO:GO:0000166GO:GO:0000724GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0006139
GO:GO:0006259GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009987
GO:GO:0010332GO:GO:0045003GO:GO:0051701GO:GO:0071248GO:GO:0071480InterPro:Helicase_ATP-bd
InterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR038718UniProt:K7K5N1EnsemblPlants:KRH77966
ProteinID:KRH77966ProteinID:KRH77966.1InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFscan:PS51192
PFscan:PS51194PANTHER:PTHR10799PANTHER:PTHR10799:SF889SMART:SM00487SMART:SM00490InterPro:SNF2-like_sf
InterPro:SNF2_NSUPFAM:SSF52540UniParc:UPI0002949503SEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:56700349..56720503
Molecular Weight (calculated)
100095.0 Da
IEP (calculated)
7.919
GRAVY (calculated)
-0.369
Length
900 amino acids
Sequence
(BLAST)
001: MFGGGGVSVR MEEEEDEVGW CSSDSGDGDG DDDIEERKSQ NVDALLRGNL VVKRQSLLPR LLSVSQGAAV CRKPFKPPCS KSHASASAYN QDLTRKLSAR
101: KRFVPWGSSS PIPIPIPRSA LDDSKFNVAV AVADVAEELK PSLPPGIDPL VLWHPQDSED ANANFTTITV DPLLVRYLRP HQREGVQFMF DCVSGLSTTP
201: NIHGCILADD MGLGKTLQSI TLLYTLLSQG FDGKPMVRKA IIVTPTSLVS NWEAEIKKWV GERVPLVALC ESTREDVISG IDNFTSPKSN LQVLIVSYET
301: FRMHSSKFSS TDSCDLLICD EAHRLKNDQT ITNRALAALP CKRRILLSGT PLQNDLEEFF AMVNFTNPGI LGDIAHFRRY YEAPIICGRE PAATAEEKKL
401: GAEQSAELSV NVNRFILRRT NALLSNHLPP KIVEVVCCKL TPLQSELYKH FIQSKNVKRA ITEELKQSKI LAYITALKKL CNHPKLIYDT IRSGSPGTSG
501: FEDCIRFFPP EMLSGRSGSW TGGHGAWVEL SGKMHVLARL LAHLRQRTND RIVLVSNYTQ TLDLFAQLCR ERRYPHLRLD GSTSISKRQK LVNCFNDPSK
601: DEFVFLLSSK AGGCGLNLIG GNRLVLFDPD WNPANDKQAA ARVWRDGQKK RVYIYRFLSA GTIEEKVYQR QMSKEGLQKV IQQEQTDSLV AQGNLLSTEN
701: LRDLFTFHEN IKSEIHENMQ CSRCQTFDGP RSTEAQSTIT DSESDEETSD IGGFAEIAGC LQNLKRSEKQ VGSPLEEDLG SWGHHFFPTS VPDAILQASA
801: GDEVTFVFTN QVNGRLVPVE SIMSPKLQQK DPKKELLKSK QNGKQKPTPF SLHNRLPLQS ASVGITKNIS MNVAFKPQYS LVSKVLPQKR SCPANINDDN
Best Arabidopsis Sequence Match ( AT3G19210.1 )
(BLAST)
001: MEEEDEEILS SSDCDDSSDS YKDDSQDSEG ENDNPECEDL AVVSLSSDAD RKSKNVKDLL RGNLVVQRQP LLPRVLSVSD GAAVCRKPFK PPCSHGYDST
101: GQLSRRLSAR KRFVPWGSST PVVVALPTKL EASTNIERDE EEEVVCLPPD IEPLVLWQSE EDGMSNVTTI MVHSVLVKFL RPHQREGVQF MFDCVSGLHG
201: SANINGCILA DDMGLGKTLQ SITLLYTLLC QGFDGTPMVK KAIIVTPTSL VSNWEAEIKK WVGDRIQLIA LCESTRDDVL SGIDSFTRPR SALQVLIISY
301: ETFRMHSSKF CQSESCDLLI CDEAHRLKND QTLTNRALAS LTCKRRVLLS GTPMQNDLEE FFAMVNFTNP GSLGDAAHFR HYYEAPIICG REPTATEEEK
401: NLAADRSAEL SSKVNQFILR RTNALLSNHL PPKIIEVVCC KMTTLQSTLY NHFISSKNLK RALADNAKQT KVLAYITALK KLCNHPKLIY DTIKSGNPGT
501: VGFENCLEFF PAEMFSGRSG AWTGGDGAWV ELSGKMHVLS RLLANLRRKT DDRIVLVSNY TQTLDLFAQL CRERRYPFLR LDGSTTISKR QKLVNRLNDP
601: TKDEFAFLLS SKAGGCGLNL IGANRLVLFD PDWNPANDKQ AAARVWRDGQ KKRVYVYRFL STGTIEEKVY QRQMSKEGLQ KVIQHEQTDN STRQGNLLST
701: EDLRDLFSFH GDVRSEIHEK MSCSRCQNDA SGTENIEEGN ENNVDDNACQ IDQEDIGGFA KDAGCFNLLK NSERQVGTPL EEDLGSWGHH FTSKSVPDAI
801: LQASAGDEVT FVFTNQVDGK LVPIESNVSP KTVESEEHNR NQPVNKRAFN KPQQRPREPL QPLSLNETTK RVKLSTYKRL HGNSNIDDAQ IKMSLQRPNL
901: VSVNHDDDFV
Arabidopsis Description
CHR25Protein CHROMATIN REMODELING 25 [Source:UniProtKB/Swiss-Prot;Acc:Q0PCS3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.