Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 58.06 | 59.5 |
| KRH73247 | Soybean | nucleus | 62.67 | 59.08 |
| AT3G42670.4 | Thale cress | nucleus | 49.88 | 48.97 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 49.72 | 48.38 |
| Bra021058.1-P | Field mustard | nucleus | 49.07 | 47.68 |
| AT5G20420.1 | Thale cress | cytosol | 48.5 | 47.5 |
| CDY56857 | Canola | cytosol | 48.58 | 47.43 |
| CDX92463 | Canola | nucleus | 48.42 | 47.27 |
| Bra002302.1-P | Field mustard | cytosol | 47.53 | 47.11 |
| Solyc06g050510.2.1 | Tomato | nucleus | 47.61 | 45.69 |
| PGSC0003DMT400061540 | Potato | nucleus | 47.45 | 45.57 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 33.68 | 38.52 |
| KXG37026 | Sorghum | nucleus | 33.68 | 33.82 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 32.87 | 32.38 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 32.79 | 32.25 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 32.96 | 32.2 |
| TraesCS2A01G089500.1 | Wheat | plastid | 32.71 | 32.04 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 33.6 | 31.11 |
| KRH39939 | Soybean | nucleus | 12.39 | 24.8 |
| KRH27453 | Soybean | cytosol | 17.49 | 24.46 |
| KRH20806 | Soybean | cytosol | 17.41 | 22.56 |
| KRH46527 | Soybean | nucleus | 20.89 | 22.47 |
| KRH05276 | Soybean | cytosol, nucleus | 4.45 | 22.18 |
| KRH23851 | Soybean | mitochondrion, nucleus | 20.89 | 22.13 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 21.3 | 21.11 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 4.62 | 20.65 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 9.8 | 15.43 |
| KRH25617 | Soybean | nucleus | 10.45 | 14.83 |
| Os04t0692750-01 | Rice | cytosol | 11.42 | 14.29 |
| KRH40956 | Soybean | nucleus | 11.01 | 13.2 |
| KRH34128 | Soybean | nucleus | 12.06 | 13.2 |
| KRH77966 | Soybean | nucleus | 9.55 | 13.11 |
| KRH19578 | Soybean | nucleus | 11.66 | 11.76 |
| KRG92726 | Soybean | nucleus | 13.68 | 11.38 |
| KRH23760 | Soybean | mitochondrion | 10.93 | 6.6 |
| KRH40039 | Soybean | mitochondrion | 10.93 | 6.6 |
| KRH77275 | Soybean | cytosol | 0.32 | 4.35 |
| KRH28211 | Soybean | mitochondrion | 0.32 | 4.35 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A0R0EUX1 | EMBL:ACUP02010805 | EnsemblPlantsGene:GLYMA_18G023900 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KRG97679 | ProteinID:KRG97679 |
| ProteinID:KRG97679.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF16719 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF792 | InterPro:SAWADEE_dom | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0006ED7E2C | : | : |
Description
hypothetical protein
Coordinates
chr18:+:1744303..1749387
Molecular Weight (calculated)
141720.0 Da
IEP (calculated)
8.002
GRAVY (calculated)
-0.580
Length
1235 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHRKSHLRQR KHPFHACPFE AYLSRSWRAV ELIKFESGTT TLYFVDNHHM TIKKGSFSDV RVRSRKATLS DCSFLRTGID ICVLSASQGN DNSDESSANH
0101: VWLDAKINSI QRKPHNPECS CQYYVNFYVN QGSLGTELRT LRKEVKVVGI NEIAILQKLE RNTCQHKYYR WESSEDCSKV PHTKLLGKFI SDLSWLVVAS
0201: AIRKVSFCAR SVENNIVYQI LGSDATTSSL YMDSEISVVN FKVNEDGMQM PVIHLVDLFE TDTNTSGDKH DSHYDEVPSS YGFEGLRRSK RRNIQPERYS
0301: DCGNVSEIKV GNVRTWPYKL NKRKDDDGGG EESLPLAQEN SDNSQKVNEL SSCREIIVYH GRNETLELKS GEANQTQLAS VPLLQEGDSL ALEHHHLNDN
0401: VTRRSDAYYS TPKLKRKRLV DLEADVDFDP GREGINSNKG VSEKRHGSSW YSRSRSHAAE HSYKDRSLNA TAYKEMIDSY LKDVNRTPTT EEPPVMDQRK
0501: EIGNFGQKKE AEIPEREDEE QISEIDMLWR EMEMALASSY LEETEGSNSA NFAKTTEESN RTCPHDYRLS EEIGIYCYKC GFVKTEIKYI TPPFIEMQRS
0601: VRHQEEKQCN GKDTKEKASK DDDFHLLSTH APTDEHNSME HDNVWKLIPQ FREKLHDHQK KAFEFLWQNI GGSMEPKLMD AESKRRGGCV ISHAPGAGKT
0701: FLIIAFLVSY LKLFPGKKPL ILAPKGTLYT WCKEFNKWEI SMPVYLIHGR GGTQKDTEQN SIVLPGFPNP NKYVKHVLDC LQKIKLWQEK PSVLVMSYTA
0801: FLALMREGSE FAHRKYMAKA LREGPGILIL DEGHNPRSTK SRLRKGLMKL KTDLRILLSG TLFQNNFCEY FNTLCLARPK FISEVLDTLD PITRRKSKTV
0901: EKAGHLLESR ARKLFLDKIA KKIDSGIGNE RMQGLNMLRE TTNGFVDVYE SENFDSAPGL QIYTLLMNTT DKQREILPKL HTRVDECNGY PLELELLVTL
1001: GSIHPWLVKT TSCANKFFTA DQLKQLDKYK YDMKAGSKVK FVLSLVFRVM QREKVLIFCH NLAPVKLLIE LFEMFFKWKK DREILLLSGE LDLFERGKVI
1101: DKFEEHGGAS KVLLASITAC AEGISLTAAS RVIFLDSEWN PSKTKQAIAR AFRPGQEKMV YVYQLLVTGT LEEDKYKRTT WKEWVSSMIF SEAFEENLSH
1201: SRAVNIEDDI LREMVEEDKS KTIHMILKNE KASTN
0101: VWLDAKINSI QRKPHNPECS CQYYVNFYVN QGSLGTELRT LRKEVKVVGI NEIAILQKLE RNTCQHKYYR WESSEDCSKV PHTKLLGKFI SDLSWLVVAS
0201: AIRKVSFCAR SVENNIVYQI LGSDATTSSL YMDSEISVVN FKVNEDGMQM PVIHLVDLFE TDTNTSGDKH DSHYDEVPSS YGFEGLRRSK RRNIQPERYS
0301: DCGNVSEIKV GNVRTWPYKL NKRKDDDGGG EESLPLAQEN SDNSQKVNEL SSCREIIVYH GRNETLELKS GEANQTQLAS VPLLQEGDSL ALEHHHLNDN
0401: VTRRSDAYYS TPKLKRKRLV DLEADVDFDP GREGINSNKG VSEKRHGSSW YSRSRSHAAE HSYKDRSLNA TAYKEMIDSY LKDVNRTPTT EEPPVMDQRK
0501: EIGNFGQKKE AEIPEREDEE QISEIDMLWR EMEMALASSY LEETEGSNSA NFAKTTEESN RTCPHDYRLS EEIGIYCYKC GFVKTEIKYI TPPFIEMQRS
0601: VRHQEEKQCN GKDTKEKASK DDDFHLLSTH APTDEHNSME HDNVWKLIPQ FREKLHDHQK KAFEFLWQNI GGSMEPKLMD AESKRRGGCV ISHAPGAGKT
0701: FLIIAFLVSY LKLFPGKKPL ILAPKGTLYT WCKEFNKWEI SMPVYLIHGR GGTQKDTEQN SIVLPGFPNP NKYVKHVLDC LQKIKLWQEK PSVLVMSYTA
0801: FLALMREGSE FAHRKYMAKA LREGPGILIL DEGHNPRSTK SRLRKGLMKL KTDLRILLSG TLFQNNFCEY FNTLCLARPK FISEVLDTLD PITRRKSKTV
0901: EKAGHLLESR ARKLFLDKIA KKIDSGIGNE RMQGLNMLRE TTNGFVDVYE SENFDSAPGL QIYTLLMNTT DKQREILPKL HTRVDECNGY PLELELLVTL
1001: GSIHPWLVKT TSCANKFFTA DQLKQLDKYK YDMKAGSKVK FVLSLVFRVM QREKVLIFCH NLAPVKLLIE LFEMFFKWKK DREILLLSGE LDLFERGKVI
1101: DKFEEHGGAS KVLLASITAC AEGISLTAAS RVIFLDSEWN PSKTKQAIAR AFRPGQEKMV YVYQLLVTGT LEEDKYKRTT WKEWVSSMIF SEAFEENLSH
1201: SRAVNIEDDI LREMVEEDKS KTIHMILKNE KASTN
0001: MKRKHYFEFN HPFNPCPFEV FCWGTWKAVE YLRIENGTMT MRLLENGQVL DDIKPFQRLR IRSRKATLID CTSFLRPGID VCVLYQRDEE TPEPVWVDAR
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
Arabidopsis Description
CHR38Chromatin remodeling 38 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.