CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39939	Soybean	nucleus	35.31	71.31
Solyc08g077650.1.1	Tomato	cytosol	2.73	65.38
KRH23851	Soybean	mitochondrion, nucleus	60.19	64.32
KRH46527	Soybean	nucleus	58.75	63.76
CDY29038	Canola	nucleus	7.06	50.0
CDX77430	Canola	nucleus	26.81	49.63
CDY59589	Canola	nucleus	6.98	49.43
VIT_02s0012g00110.t01	Wine grape	cytosol	25.44	49.15
PGSC0003DMT400033315	Potato	nucleus	5.7	48.97
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	13.32	47.03
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	6.42	45.98
Solyc08g077580.1.1	Tomato	cytosol	6.26	45.09
PGSC0003DMT400096321	Potato	nucleus	4.49	44.8
Os05t0392400-01	Rice	cytosol, nucleus	16.13	44.67
Solyc04g054440.1.1	Tomato	nucleus	22.55	42.9
PGSC0003DMT400088837	Potato	cytosol	6.42	42.33
PGSC0003DMT400017302	Potato	nucleus	20.71	41.41
Solyc08g061370.1.1	Tomato	cytosol	5.78	41.38
Solyc01g068320.1.1	Tomato	cytosol	21.91	40.87
Solyc01g068300.1.1	Tomato	cytosol	12.76	40.77
Solyc08g077610.1.1	Tomato	nucleus	21.75	40.51
Solyc02g033050.1.1	Tomato	nucleus	20.39	40.38
Solyc08g077690.2.1	Tomato	nucleus	23.35	39.27
Solyc01g060460.1.1	Tomato	nucleus	23.92	39.16
CDX93009	Canola	nucleus	30.34	38.97
Solyc08g061410.1.1	Tomato	cytosol	13.64	38.72
Solyc08g062060.1.1	Tomato	nucleus	3.29	38.68
CDX94823	Canola	nucleus	30.18	38.6
Solyc03g061640.1.1	Tomato	cytosol	5.14	38.55
Solyc08g061350.1.1	Tomato	mitochondrion	2.17	38.03
Solyc08g061390.1.1	Tomato	cytosol	7.46	37.5
PGSC0003DMT400090992	Potato	mitochondrion	7.3	37.14
CDY66441	Canola	nucleus	30.58	36.88
Bra015035.1-P	Field mustard	nucleus	30.66	36.66
Solyc08g062000.1.1	Tomato	cytosol	11.4	36.32
Bra001944.1-P	Field mustard	nucleus	30.9	36.12
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	6.9	35.68
GSMUA_Achr7P06840_001	Banana	nucleus	25.36	33.51
Solyc08g061990.1.1	Tomato	mitochondrion	10.35	33.51
Solyc08g061340.1.1	Tomato	cytosol	5.94	33.18
AT3G24340.1	Thale cress	nucleus	30.02	33.04
PGSC0003DMT400004629	Potato	nucleus	23.52	32.85
Os02t0650800-00	Rice	cytosol	24.64	32.76
PGSC0003DMT400085993	Potato	cytosol	4.41	32.74
PGSC0003DMT400004673	Potato	nucleus	23.6	32.1
Solyc08g077670.1.1	Tomato	cytosol	11.48	31.57
Solyc08g077600.1.1	Tomato	cytosol	9.95	31.55
PGSC0003DMT400004672	Potato	nucleus	24.88	31.16
TraesCS3B01G251000.1	Wheat	nucleus	26.08	30.63
TraesCS3A01G220700.1	Wheat	nucleus	25.92	30.59
TraesCS3A01G238800.1	Wheat	nucleus	25.76	30.37
CDY47279	Canola	nucleus	31.94	29.77
AT1G05490.1	Thale cress	mitochondrion, nucleus	32.99	29.15
CDY10115	Canola	nucleus	32.18	29.08
PGSC0003DMT400037430	Potato	nucleus	15.41	28.57
PGSC0003DMT400085944	Potato	cytosol	5.22	27.66
TraesCS2D01G053900.1	Wheat	nucleus	23.68	27.16
TraesCS6A01G241100.1	Wheat	nucleus	24.8	27.13
Solyc08g062070.1.1	Tomato	cytosol	2.89	27.07
PGSC0003DMT400017313	Potato	nucleus	26.16	27.05
TraesCS3D01G231800.1	Wheat	nucleus	27.21	26.69
HORVU3Hr1G054100.2	Barley	nucleus	26.57	26.02
PGSC0003DMT400038789	Potato	nucleus	23.03	25.95
HORVU6Hr1G061720.1	Barley	cytosol	7.3	25.63
Bra015430.1-P	Field mustard	nucleus	32.42	25.52
KXG31163	Sorghum	nucleus	25.84	25.2
Zm00001d051324_P001	Maize	nucleus	26.32	24.53
Zm00001d038113_P001	Maize	mitochondrion, nucleus	28.09	24.39
OQU77943	Sorghum	mitochondrion	28.01	23.94
HORVU1Hr1G062970.3	Barley	mitochondrion	28.41	23.89
TraesCS1D01G245400.1	Wheat	nucleus	28.41	23.84
TraesCS1A01G245700.1	Wheat	mitochondrion, nucleus	28.33	23.71
KRH27453	Soybean	cytosol	16.77	23.67
TraesCS1B01G256700.1	Wheat	mitochondrion, nucleus	28.25	23.58
KRH05276	Soybean	cytosol, nucleus	4.65	23.39
KRH32203	Soybean	cytosol, mitochondrion, nucleus	4.9	22.1
KRH20806	Soybean	cytosol	16.77	21.93
KRG97679	Soybean	nucleus	21.11	21.3
KRG88505	Soybean	endoplasmic reticulum, nucleus	19.82	20.5
KRH73247	Soybean	nucleus	20.22	19.24
KRH59600	Soybean	cytosol, nucleus, plastid	10.67	16.96
KRH77966	Soybean	nucleus	10.43	14.44
KRH25617	Soybean	nucleus	9.95	14.25
KRH34128	Soybean	nucleus	12.6	13.91
KRH40956	Soybean	nucleus	11.32	13.69
KRG92726	Soybean	nucleus	14.45	12.12
KRH19578	Soybean	nucleus	11.56	11.76
KRH77275	Soybean	cytosol	0.8	10.87
KRH28211	Soybean	mitochondrion	0.8	10.87
KRH40039	Soybean	mitochondrion	12.36	7.52
KRH23760	Soybean	mitochondrion	12.2	7.43
HORVU3Hr1G014620.1	Barley	nucleus	0.4	4.63
Os02t0762600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100807262	MapMan:16.10.1.2	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A0R0IWG1	EMBL:ACUP02005348
EnsemblPlantsGene:GLYMA_08G339900	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	EnsemblPlants:KRH46528	ProteinID:KRH46528
ProteinID:KRH46528.1	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194
PANTHER:PTHR10799	PANTHER:PTHR10799:SF858	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N
SUPFAM:SSF52540	UniParc:UPI0003DE7AA7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:45612830..45620215

Molecular Weight (calculated)

140229.0 Da

IEP (calculated)

4.842

GRAVY (calculated)

-0.549

Length

1246 amino acids

Sequence
(BLAST)

0001: MLIFARCLLG GSWWTLEDKK EILRCGVFLI IVRRNRKEKG LFFVLVLLFE MNEYTGPARR TRSKGVEVRG GLIRSRKRRR VVDYDDDELV FVKELKGGGE
0101: GASAKIEKSM ERGFEFLGES EDDGPFEVVE IDEDDDEAEE EVYGECEQKK KRVEVKVEEK DEGPEVLCYV AAEKVASFGG GDDDECGSRP ENPVVMLCVS
0201: DDGGGQSEED HGRDRSSVSS DDGFGSSSSS SSEDDDSSDD DFKVGVEDER ADDEEDYSSI EEESESDDDS SCDDERGELY KKFVKERVRN LVSKSGSSGV
0301: SRRKGKGNRR MQVEEEEMVE KWNGADCASV TSSKSCTCKD ETRQAEVIDD AAERGESVNA AADELFANQV PRPSLPLAAR ETVPLNGNCQ KKKPVEAESA
0401: KEIDMLWNEL DIALQETEAG DSTMLKKKRL PSGVRSVSPL PKRQEKMGDS AKVVMKEDDG NAAKNGLHEV LRMSNRSKNI GFKFFTECFW GKPDSDKDDP
0501: MELEEKDGVV VQGQTQPLAC GVGIPLTWDF LKKNPVEKSE AEKELDMLWA EMEMLLRAGE IGIQVDEARA KEENPALQCK HDTIFNEEIG VYCRLCGWIA
0601: TEIKYIMPPF VDSKRSGREA FPGAWKTSQF DGATFDDCGD DSGAAWSHNE GTVWDIISDI KKGLFPHQQE GFEFIWTSLA GTTNLAELKR VDPGTEGGCI
0701: ISHAPGTGKT KLTMVFLQTY LQLFPKCLPV IIAPANILLT WEDELRKWNI GIPFHNLNNA ELSGKENVIN EFGYQELNKD AIRMLKLCSW YKEKSILLIS
0801: YNLYEKLAGG KSEDDGEKEK KNRKIRKEKK RASIETAMGK VLRDYPGLLV LDEGHTPRNQ RSCIWKVLSE SRSQKRILLS GTPFQNNFLE LFNIFCLMKP
0901: SFSDNIPQEL KKFCQSKLIQ ERKASKDVSW ESINSGNPAD EKIKQLKLLM NPFVHVHKGS ILQKNLLGLQ DCVLILKPEI LQQKILDSIE CSQNGLNFEH
1001: KLALVSVHPS LFLNCSLSKK EESVIDMDQL KKCRLDSYEG VKTKFLMEFV NLCDAVDEKV LVFSQFIDTL ILIKDQLESA FNWSEGREVL FMHGRVDQKQ
1101: KQSLIHSFND ANSQAKVLLA SIKASSEGIN LVGASRVVLL DVVWNPSVER QAICRAYRLG QKKVVYTYHL LAQGTPECTK YCKQAEKNRL SELVFSNRNA
1201: ESDKLKRSGV IEDKVLDAMV QHEKLKDIFG ECLVQPKEGD QETLCP

Best Arabidopsis Sequence Match ( AT1G05490.1 )
(BLAST)

0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP

Arabidopsis Description

CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.