Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 86.18 | 93.69 |
| KRG97679 | Soybean | nucleus | 59.08 | 62.67 |
| AT5G20420.1 | Thale cress | cytosol | 51.45 | 53.45 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 51.22 | 52.88 |
| AT3G42670.4 | Thale cress | nucleus | 50.69 | 52.78 |
| CDX92463 | Canola | nucleus | 50.76 | 52.57 |
| CDY56857 | Canola | cytosol | 50.69 | 52.49 |
| Bra002302.1-P | Field mustard | cytosol | 49.54 | 52.09 |
| Bra021058.1-P | Field mustard | nucleus | 50.53 | 52.09 |
| Solyc06g050510.2.1 | Tomato | nucleus | 49.16 | 50.04 |
| PGSC0003DMT400061540 | Potato | nucleus | 48.93 | 49.84 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 32.29 | 39.17 |
| KXG37026 | Sorghum | nucleus | 32.52 | 34.63 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 32.14 | 33.57 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 32.29 | 33.47 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 31.98 | 33.36 |
| TraesCS2A01G089500.1 | Wheat | plastid | 31.83 | 33.07 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 31.91 | 31.33 |
| KRH39939 | Soybean | nucleus | 11.98 | 25.45 |
| KRH27453 | Soybean | cytosol | 16.41 | 24.35 |
| KRH20806 | Soybean | cytosol | 16.11 | 22.14 |
| KRH46527 | Soybean | nucleus | 19.24 | 21.95 |
| KRH23851 | Soybean | mitochondrion, nucleus | 19.39 | 21.78 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 4.43 | 21.01 |
| KRH05276 | Soybean | cytosol, nucleus | 3.89 | 20.56 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 19.24 | 20.22 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 9.16 | 15.31 |
| Os04t0692750-01 | Rice | cytosol | 11.22 | 14.89 |
| KRH25617 | Soybean | nucleus | 9.69 | 14.6 |
| KRH40956 | Soybean | nucleus | 10.31 | 13.11 |
| KRH77966 | Soybean | nucleus | 8.78 | 12.78 |
| KRH34128 | Soybean | nucleus | 10.99 | 12.75 |
| KRH19578 | Soybean | nucleus | 10.99 | 11.76 |
| KRG92726 | Soybean | nucleus | 12.82 | 11.31 |
| KRH23760 | Soybean | mitochondrion | 11.07 | 7.08 |
| KRH40039 | Soybean | mitochondrion | 10.99 | 7.03 |
| KRH28211 | Soybean | mitochondrion | 0.38 | 5.43 |
| KRH77275 | Soybean | cytosol | 0.38 | 5.43 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100785036 | MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A0R0LBQ6 | EMBL:ACUP02001272 |
| EnsemblPlantsGene:GLYMA_02G261800 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | ProteinID:KRH73246.1 | EnsemblPlants:KRH73247 |
| ProteinID:KRH73247 | ProteinID:KRH73247.1 | ProteinID:KRH73248.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF792 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000549FAEE | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:44776099..44783352
Molecular Weight (calculated)
150214.0 Da
IEP (calculated)
8.328
GRAVY (calculated)
-0.534
Length
1310 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAHRKRRLDQ LKHPFSPHPF EAVAFGSWQA VEFIKIEAGT MSMHFADNHH VVMEKGPLSD IRIRSRKATL PDCSRFLRPG IDVCVLSAPQ QSDDADAGIN
0101: LDPVWTDAKI SSVQRKPHDS ECSCQFYVNF YVHQGSLGAE LRTLNKEIKV VGINQISILQ KLESTPCENQ HYRWASSEDC SIISHTKLLL GKVLCDLSWL
0201: VVTTALKKKV SFCVRSLEDK LVYQVLERDT TVSTSLNNES HIDVVNFKTE KGTLFSIVSQ VATLKTKRVE PEQESHEDKE SPSYNVEGLR RSKRRNVQPE
0301: RYLGCEKVSQ IDVGSFRNLP PVKINTWKDD DVDHEMNIPL AGLFSLQKKF LEGDTDNHQK VKKASSCREL VVYQRKKTKS QKVKSGGDDQ NEHQNHLAII
0401: ALPAQHDPVE VIHCDDLNDK VTRSYGHESS EVSSKYRHLI GTTSKKNDIK LLTFESHNHA AKSDDADKID DLSSRYHYSY GTPKSQRMGL SDLDDMVDLG
0501: NKWEGISSSK GFQGKKQRTT YLRSRDHGEQ KRYNYKDRSL NAAAYKDLIN SYLKNMNTRP TNEESAIADQ WKQSETPSNI GQKTETQMLD EEDAEEESEM
0601: DMLWRELEVS LASCYLEEET EDSHAAVFTE TLENPNPGCP HDFRMNEEIG IYCYRCGFVS TEIKYITPPF IQHSVRHQEE KQSPEEDSKT KPDEDDDIDL
0701: LPALDSPEKL VSQENENVWA LIPELKAKLH AHQKKAFEFL WQNIAGSMDP ELMETASKRR GGCVISHTPG AGKTFLIIAF LVSYLKLFPG KRPLVLAPKT
0801: TLYTWYKEFI KWDIPIPVYL IHGRRTYRVF KQKSSIVIPG VPKPTDDVKH VLDCLEKIQK WHSHPSVLIM GYTSFLTLMR EDSKFAHRKY MAKVLRESPG
0901: IMVLDEGHNP RSTKSRLRKV LMKVQTELRI LLSGTLFQNN FCEYFNTLCL ARPKFIHEVL KALDSKYKRK GKVAKKASHL LESRARKFFL DQIAKKIDSN
1001: NGRERRQGLK MLRNVTNGFI DVYEGRSSDG LPGLQIYTLL MNSTDTQHEI LHELHKKMAR VNGYPLELEL LITLGSIHPW LVKSAVCAEK FFTPAQLMEL
1101: EKCKFDLRIG SKVKFVLSLI YRVVKKEKVL IFCHNIAPVK LFVEYFEKYF GWTKGREVLV LSGELELFER GRVMDKFEEP GGVAKILLAS ITACAEGISL
1201: TAASRVIMLD SEWNPSKTKQ AIARAFRPGQ QKVVYVYQLL VTGSLEEDKY KRTTWKEWVS SMIFSEAFVE DPSQWQAEKI EDYILREMVA EDRSKSFHMI
1301: MKNEKTSTNK
0101: LDPVWTDAKI SSVQRKPHDS ECSCQFYVNF YVHQGSLGAE LRTLNKEIKV VGINQISILQ KLESTPCENQ HYRWASSEDC SIISHTKLLL GKVLCDLSWL
0201: VVTTALKKKV SFCVRSLEDK LVYQVLERDT TVSTSLNNES HIDVVNFKTE KGTLFSIVSQ VATLKTKRVE PEQESHEDKE SPSYNVEGLR RSKRRNVQPE
0301: RYLGCEKVSQ IDVGSFRNLP PVKINTWKDD DVDHEMNIPL AGLFSLQKKF LEGDTDNHQK VKKASSCREL VVYQRKKTKS QKVKSGGDDQ NEHQNHLAII
0401: ALPAQHDPVE VIHCDDLNDK VTRSYGHESS EVSSKYRHLI GTTSKKNDIK LLTFESHNHA AKSDDADKID DLSSRYHYSY GTPKSQRMGL SDLDDMVDLG
0501: NKWEGISSSK GFQGKKQRTT YLRSRDHGEQ KRYNYKDRSL NAAAYKDLIN SYLKNMNTRP TNEESAIADQ WKQSETPSNI GQKTETQMLD EEDAEEESEM
0601: DMLWRELEVS LASCYLEEET EDSHAAVFTE TLENPNPGCP HDFRMNEEIG IYCYRCGFVS TEIKYITPPF IQHSVRHQEE KQSPEEDSKT KPDEDDDIDL
0701: LPALDSPEKL VSQENENVWA LIPELKAKLH AHQKKAFEFL WQNIAGSMDP ELMETASKRR GGCVISHTPG AGKTFLIIAF LVSYLKLFPG KRPLVLAPKT
0801: TLYTWYKEFI KWDIPIPVYL IHGRRTYRVF KQKSSIVIPG VPKPTDDVKH VLDCLEKIQK WHSHPSVLIM GYTSFLTLMR EDSKFAHRKY MAKVLRESPG
0901: IMVLDEGHNP RSTKSRLRKV LMKVQTELRI LLSGTLFQNN FCEYFNTLCL ARPKFIHEVL KALDSKYKRK GKVAKKASHL LESRARKFFL DQIAKKIDSN
1001: NGRERRQGLK MLRNVTNGFI DVYEGRSSDG LPGLQIYTLL MNSTDTQHEI LHELHKKMAR VNGYPLELEL LITLGSIHPW LVKSAVCAEK FFTPAQLMEL
1101: EKCKFDLRIG SKVKFVLSLI YRVVKKEKVL IFCHNIAPVK LFVEYFEKYF GWTKGREVLV LSGELELFER GRVMDKFEEP GGVAKILLAS ITACAEGISL
1201: TAASRVIMLD SEWNPSKTKQ AIARAFRPGQ QKVVYVYQLL VTGSLEEDKY KRTTWKEWVS SMIFSEAFVE DPSQWQAEKI EDYILREMVA EDRSKSFHMI
1301: MKNEKTSTNK
0001: MKKRGFYNLK HPFDPCPFEF FCSGTWKPVE YMRIEDGMMT IRLLENGYVL EDIRPFQRLR LRSRKAALSD CICFLRPDID VCVLYRIHED DLEPVWVDAR
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
Arabidopsis Description
CLSY2SNF2 domain-containing protein CLASSY 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K493]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.