Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
25327517
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 13.17 | 27.72 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 22.59 | 24.32 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 9.63 | 21.11 |
| Os05t0247900-01 | Rice | plastid | 18.24 | 21.03 |
| Os07t0692600-01 | Rice | mitochondrion | 8.92 | 18.53 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 12.56 | 18.45 |
| Os02t0762800-00 | Rice | nucleus | 18.03 | 18.16 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 10.94 | 16.72 |
| Os10t0457700-01 | Rice | nucleus | 18.95 | 14.18 |
| Os02t0650800-00 | Rice | cytosol | 13.27 | 13.98 |
| Os06t0255700-01 | Rice | cytosol | 13.27 | 13.85 |
| Os03t0165266-00 | Rice | nucleus | 13.27 | 12.2 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 14.79 | 12.12 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 12.97 | 11.85 |
| KRG97679 | Soybean | nucleus | 14.29 | 11.42 |
| KRH73247 | Soybean | nucleus | 14.89 | 11.22 |
| Bra002302.1-P | Field mustard | cytosol | 13.78 | 10.91 |
| CDY56857 | Canola | cytosol | 13.98 | 10.91 |
| Solyc06g050510.2.1 | Tomato | nucleus | 14.08 | 10.8 |
| CDX92463 | Canola | nucleus | 13.78 | 10.75 |
| AT3G42670.4 | Thale cress | nucleus | 13.68 | 10.73 |
| PGSC0003DMT400061540 | Potato | nucleus | 13.88 | 10.65 |
| KXG37026 | Sorghum | nucleus | 13.27 | 10.65 |
| Bra021058.1-P | Field mustard | nucleus | 13.68 | 10.62 |
| AT5G20420.1 | Thale cress | cytosol | 13.37 | 10.47 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 5.57 | 10.42 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 13.17 | 10.37 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 13.17 | 10.35 |
| TraesCS2A01G089500.1 | Wheat | plastid | 13.17 | 10.31 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 13.17 | 10.24 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 12.97 | 10.13 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 13.27 | 9.82 |
| Os02t0161200-01 | Rice | nucleus | 2.84 | 6.57 |
| Os02t0161300-01 | Rice | extracellular | 1.32 | 2.54 |
| Os07t0692500-01 | Rice | cytosol | 1.42 | 2.46 |
| Os04t0692700-01 | Rice | nucleus | 0.51 | 0.64 |
| Os07t0692401-00 | Rice | mitochondrion | 0.2 | 0.41 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EntrezGene:9266414 | UniProt:A0A0P0WGX7 | ProteinID:BAS91802.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| EnsemblPlantsGene:Os04g0692750 | EnsemblPlants:Os04t0692750-01 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0001C7D9BE | RefSeq:XP_015637061.1 | SEG:seg | : |
Description
ENDOSPERMLESS 1SNF2 family chromatin-remodeling helicase, Syncytial endosperm development (Os04t0692750-01)
Coordinates
chr4:-:35452104..35459864
Molecular Weight (calculated)
110505.0 Da
IEP (calculated)
6.379
GRAVY (calculated)
-0.549
Length
987 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPPFDIC GDLDDDPTPP APTPLAAPTP NGLNDRLLRL TRTHQRGPSQ NPNPNPNPNP KPPPPPPPQE PEPAKVKLAG RRRLCKLSTA GDESAGDDDS
101: IRDILDDLTT RLDSLSVDRP TARPRPHVSP LPCALHADPD PSQSQLNDGT KPSSSFVDCD DDDDDAGGAY GGFGVKEEVT RKVFKASSSF GGRGNDDKMK
201: AKGAYAFDTV SRKTTTESKA SKFFGDYDDE DDIDQDAENG KENHADDVGW EKTEDFKMEP TGTGVTRKPY NLPGRIFNML YPHQREGLRW LWVLHCRGTG
301: GILGDDMGLG KTMQVSAFLA GLFHSRLIKR VLVVAPKTLL THWTKELSVV SLKDKIRDYS GPNANARNYE LKYAFKEGGI LLTTYDIVRN NFKMIKGNFT
401: NDFDDEEETL WNYVILDEGH IIKNPKTQRA QSLFEIPCAH RIVISGTPIQ NNLKEMWALF YFCCPEVLGD KEQFKARYEH AIIQGNDKNA TNRQKHIGSN
501: VAKELRERIK PYFLRRMKNE VFLDSGTGED KKLAKKNELI IWLKLTSCQR QLYEAFLNSE LVHSSMQGSP LAAITILKKI CDHPLLLTKK AAEGVLEGMD
601: AMLNNQEMGM VEKMAMNLAD MAHDDDDVEL QVGQDVSCKL SFMMSLLQNL VSEGHNVLIF SQTRKMLNII QEAIILEGYK FLRIDGTTKI SERERIVKDF
701: QEGPGAPIFL LTTQVGGLGL TLTKAARVIV VDPAWNPSTD NQSVDRAYRI GQMKDVIVYR LMTSGTIEEK IYKLQVFKGA LFRTATEHKE QTRYFSKRDI
801: QELFSLPEQG FDVSLTQKQL QEEHGQQLVM DDSLRKHIQF LEQQGIAGVS HHSLLFSKTA ILPTLNDNDG LDSRRAMPMA KHYYKGASSD YVANGAAYAM
901: KPKEFIARTY SPNSTSTESP EEIKAKINRL SQTLANTVLV AKLPDRGDKI RRQINELDEK LTVIESSPEP LERKGPTEVI CLDDLSV
101: IRDILDDLTT RLDSLSVDRP TARPRPHVSP LPCALHADPD PSQSQLNDGT KPSSSFVDCD DDDDDAGGAY GGFGVKEEVT RKVFKASSSF GGRGNDDKMK
201: AKGAYAFDTV SRKTTTESKA SKFFGDYDDE DDIDQDAENG KENHADDVGW EKTEDFKMEP TGTGVTRKPY NLPGRIFNML YPHQREGLRW LWVLHCRGTG
301: GILGDDMGLG KTMQVSAFLA GLFHSRLIKR VLVVAPKTLL THWTKELSVV SLKDKIRDYS GPNANARNYE LKYAFKEGGI LLTTYDIVRN NFKMIKGNFT
401: NDFDDEEETL WNYVILDEGH IIKNPKTQRA QSLFEIPCAH RIVISGTPIQ NNLKEMWALF YFCCPEVLGD KEQFKARYEH AIIQGNDKNA TNRQKHIGSN
501: VAKELRERIK PYFLRRMKNE VFLDSGTGED KKLAKKNELI IWLKLTSCQR QLYEAFLNSE LVHSSMQGSP LAAITILKKI CDHPLLLTKK AAEGVLEGMD
601: AMLNNQEMGM VEKMAMNLAD MAHDDDDVEL QVGQDVSCKL SFMMSLLQNL VSEGHNVLIF SQTRKMLNII QEAIILEGYK FLRIDGTTKI SERERIVKDF
701: QEGPGAPIFL LTTQVGGLGL TLTKAARVIV VDPAWNPSTD NQSVDRAYRI GQMKDVIVYR LMTSGTIEEK IYKLQVFKGA LFRTATEHKE QTRYFSKRDI
801: QELFSLPEQG FDVSLTQKQL QEEHGQQLVM DDSLRKHIQF LEQQGIAGVS HHSLLFSKTA ILPTLNDNDG LDSRRAMPMA KHYYKGASSD YVANGAAYAM
901: KPKEFIARTY SPNSTSTESP EEIKAKINRL SQTLANTVLV AKLPDRGDKI RRQINELDEK LTVIESSPEP LERKGPTEVI CLDDLSV
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.