Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92463 | Canola | nucleus | 97.79 | 97.79 |
| AT5G20420.1 | Thale cress | cytosol | 81.9 | 82.16 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 49.01 | 51.45 |
| KRH73247 | Soybean | nucleus | 52.49 | 50.69 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 49.17 | 49.02 |
| KRG97679 | Soybean | nucleus | 47.43 | 48.58 |
| Solyc06g050510.2.1 | Tomato | nucleus | 47.27 | 46.46 |
| PGSC0003DMT400061540 | Potato | nucleus | 47.19 | 46.42 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 31.54 | 36.94 |
| KXG37026 | Sorghum | nucleus | 32.25 | 33.17 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 32.41 | 32.44 |
| CDX77430 | Canola | nucleus | 17.23 | 32.39 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 31.86 | 32.14 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 31.78 | 32.01 |
| TraesCS2A01G089500.1 | Wheat | plastid | 31.7 | 31.8 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 32.25 | 30.58 |
| CDY59589 | Canola | nucleus | 4.11 | 29.55 |
| CDY29038 | Canola | nucleus | 3.95 | 28.41 |
| CDY67491 | Canola | cytosol | 3.48 | 27.85 |
| CDY23754 | Canola | cytosol | 15.81 | 25.94 |
| CDY37734 | Canola | nucleus | 15.34 | 25.66 |
| CDX94823 | Canola | nucleus | 18.81 | 24.44 |
| CDX93009 | Canola | nucleus | 18.74 | 24.43 |
| CDY66441 | Canola | nucleus | 19.53 | 23.91 |
| CDX89710 | Canola | nucleus | 15.26 | 22.34 |
| CDY16534 | Canola | nucleus | 7.19 | 20.87 |
| CDX78226 | Canola | cytosol | 2.85 | 19.46 |
| CDY47279 | Canola | nucleus | 19.68 | 18.62 |
| CDY10115 | Canola | nucleus | 19.53 | 17.91 |
| CDX99258 | Canola | nucleus | 10.04 | 14.0 |
| Os04t0692750-01 | Rice | cytosol | 10.91 | 13.98 |
| CDX92308 | Canola | nucleus | 10.04 | 13.94 |
| CDX92882 | Canola | nucleus | 11.07 | 12.4 |
| CDY51705 | Canola | nucleus | 11.3 | 12.34 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.51 | 11.61 |
| CDY43772 | Canola | mitochondrion | 10.43 | 11.38 |
| CDX95047 | Canola | nucleus | 12.65 | 10.81 |
| CDX93550 | Canola | nucleus | 12.57 | 10.65 |
| CDY22674 | Canola | nucleus | 5.85 | 9.61 |
| CDY37413 | Canola | mitochondrion, nucleus | 9.49 | 7.49 |
| CDY32510 | Canola | mitochondrion, nucleus | 9.49 | 7.47 |
| CDX73492 | Canola | mitochondrion | 11.78 | 7.16 |
| CDX78225 | Canola | mitochondrion | 9.17 | 5.75 |
| CDY06321 | Canola | nucleus | 1.74 | 3.78 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.79 | 2.55 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078J182 | UniProt:A0A078J182 | EnsemblPlants:CDY56857 |
| ProteinID:CDY56857 | ProteinID:CDY56857.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00020195001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF792 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EE2F6B | SEG:seg | : | : | : | : |
Description
BnaC09g54090DBnaC09g54090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J182]
Coordinates
chrLK033525:+:16326..20746
Molecular Weight (calculated)
145950.0 Da
IEP (calculated)
7.798
GRAVY (calculated)
-0.425
Length
1265 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKRRRFYDLK HPFDPFPFEI FSCGTWNPVE YIRIQHGKMT VPLLENGYIL EDIRPFQRLR LRSRKATLND CTCFLRPGID VCVLYPLHED DLEPVWIDAR
0101: IVSIERKPHE SECTCEIYVK IYIDQGCIGM EGQRINRDSV IIGLNQISIL QKFYKEQSGD QFYRWKFSED CTTLMKTRLS LGNFLPDLSW LLVTSVMKNI
0201: VFHVRTVQTK MVYEIVTDEA SSSSLSSMNI TVEDGVSLSK VVMFNPADIV DLEVNQETEL YSEEDDVVEL RRSKRRVMRP DRYTGCDYQL DTNDGWVRMM
0301: PYRFEKLDVV SMEDEYYYYE EEDSGHEEDD DTQNDLFKIK RSKSLRLKPK RRQGQIVMVE KKRRRQIVMI DKKRGRELGR KEKFGLTVIP FTPVFDPIPL
0401: EQFGLNANSL DQGGGFSRNQ YFDDIENYRS KSAKFGKKAT EMEEMMESDL CWKGPNHVVK SVQTRVTRSS SRSAAQKNKC SDEPKVYKKV TLSAGAYNKL
0501: IDAYMSNIDS TIASLNEPAS VVDQWEELKK TNFASKPHGW EMGGASSEDG EGETSENDML WREMELCLAS SYILDDNEVR VDNEAFEKAK SGCEHEYMLD
0601: EEIGMCCRLC GHVGSEIKHV SAPFAKHKKW TIETKQIEED DIKTKLSHKK STSKDFTMSN DSPEMLTAEE SDNVWALIPH LKRKLHMHQR RAFEFLWRNL
0701: AGSVEPPLMD PTSDNIGGCV ISHAPGAGKT FLMIAFLTSY LKLFPGKRPL VLAPKTTLYT WYKEFIKWEI PVPVHLIHGR RTYCVFKKNS VVNFNRVPKP
0801: SQDVMHVLDC LEKIQKWHAH PSVLVMGYTS FLTLMREDSK FAHRKYMAKV LRESPGLLIL DEGHNPRSTK SRLRKGLMKV GTDLRILLSG TLFQNNFCEY
0901: FNTLCLARPK FVHEVLMELD KKFKANQGVN KAPHLLENRA RKFFLDNIAK KIDAGVGDER LQGLNMLRNM TTSFIDNYEG SGGGDALPGL QIYTLLMNST
1001: DIQHKILTKL GNVMASYHGF LLELELLVTL AAIHPWLVKT SACCAKFLNA QELLEIERLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFIE
1101: LFESIFRWQR GREILTLTGD QELFERGRVI DKFEEPGNPS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT
1201: LEEDKYKRTT WKEWVSSMIF SEDFVEDPSL WQAEKIEDDV LREIVGEDRV KSFHMIMKNE KASTG
0101: IVSIERKPHE SECTCEIYVK IYIDQGCIGM EGQRINRDSV IIGLNQISIL QKFYKEQSGD QFYRWKFSED CTTLMKTRLS LGNFLPDLSW LLVTSVMKNI
0201: VFHVRTVQTK MVYEIVTDEA SSSSLSSMNI TVEDGVSLSK VVMFNPADIV DLEVNQETEL YSEEDDVVEL RRSKRRVMRP DRYTGCDYQL DTNDGWVRMM
0301: PYRFEKLDVV SMEDEYYYYE EEDSGHEEDD DTQNDLFKIK RSKSLRLKPK RRQGQIVMVE KKRRRQIVMI DKKRGRELGR KEKFGLTVIP FTPVFDPIPL
0401: EQFGLNANSL DQGGGFSRNQ YFDDIENYRS KSAKFGKKAT EMEEMMESDL CWKGPNHVVK SVQTRVTRSS SRSAAQKNKC SDEPKVYKKV TLSAGAYNKL
0501: IDAYMSNIDS TIASLNEPAS VVDQWEELKK TNFASKPHGW EMGGASSEDG EGETSENDML WREMELCLAS SYILDDNEVR VDNEAFEKAK SGCEHEYMLD
0601: EEIGMCCRLC GHVGSEIKHV SAPFAKHKKW TIETKQIEED DIKTKLSHKK STSKDFTMSN DSPEMLTAEE SDNVWALIPH LKRKLHMHQR RAFEFLWRNL
0701: AGSVEPPLMD PTSDNIGGCV ISHAPGAGKT FLMIAFLTSY LKLFPGKRPL VLAPKTTLYT WYKEFIKWEI PVPVHLIHGR RTYCVFKKNS VVNFNRVPKP
0801: SQDVMHVLDC LEKIQKWHAH PSVLVMGYTS FLTLMREDSK FAHRKYMAKV LRESPGLLIL DEGHNPRSTK SRLRKGLMKV GTDLRILLSG TLFQNNFCEY
0901: FNTLCLARPK FVHEVLMELD KKFKANQGVN KAPHLLENRA RKFFLDNIAK KIDAGVGDER LQGLNMLRNM TTSFIDNYEG SGGGDALPGL QIYTLLMNST
1001: DIQHKILTKL GNVMASYHGF LLELELLVTL AAIHPWLVKT SACCAKFLNA QELLEIERLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFIE
1101: LFESIFRWQR GREILTLTGD QELFERGRVI DKFEEPGNPS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT
1201: LEEDKYKRTT WKEWVSSMIF SEDFVEDPSL WQAEKIEDDV LREIVGEDRV KSFHMIMKNE KASTG
0001: MKKRGFYNLK HPFDPCPFEF FCSGTWKPVE YMRIEDGMMT IRLLENGYVL EDIRPFQRLR LRSRKAALSD CICFLRPDID VCVLYRIHED DLEPVWVDAR
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
0101: IVSIERKPHE SECSCKINVR IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS LGKFLPDLSW LTVTSTLKSI
0201: VFQIRTVQTK MVYQIVTDEE GSSSTLSSMN ITLEDGVSLS KVVKFNPADI LDDSQDLEIK QETDYYQEED EVVELRRSKR RNVRPDIYTG CDYEPDTIDG
0301: WVRMMPYQFG KCAVNVESDE DEDDNNEDGD TNDDLYIPLS RLFIKKKKTN SREAKPKSRK GEIVVIDKRR VHGFGRKERK SELSVIPFTP VFEPIPLEQF
0401: GLNANSFGGG GSFSRSQYFD ETEKYRSKGM KYGKKMTEME EMMEADLCWK GPNQVKSFQK RTSRSSRSVA PKTEDSDEPR VYKKVTLSAG AYNKLIDTYM
0501: NNIESTIAAK DEPTSVVDQW EELKKTNFAF KLHGDMEKNL SEDGEGETSE NEMLWREMEL CLASSYILDD NEVRVDNEAF EKARSGCEHD YRLEEEIGMC
0601: CRLCGHVGSE IKDVSAPFAE HKKWTIETKH IEEDDIKTKL SHKEAQTKDF SMISDSSEML AAEESDNVWA LIPKLKRKLH VHQRRAFEFL WRNVAGSVEP
0701: SLMDPTSGNI GGCVISHSPG AGKTFLIIAF LTSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWEIPVPVHL IHGRRTYCTF KQNKTVQFNG VPKPSRDVMH
0801: VLDCLEKIQK WHAHPSVLVM GYTSFTTLMR EDSKFAHRKY MAKVLRESPG LLVLDEGHNP RSTKSRLRKA LMKVGTDLRI LLSGTLFQNN FCEYFNTLCL
0901: ARPKFIHEVL MELDQKFKTN HGVNKAPHLL ENRARKLFLD IIAKKIDASV GDERLQGLNM LKNMTNGFID NYEGSGSGSG DALPGLQIYT LVMNSTDIQH
1001: KILTKLQDVI KTYFGYPLEV ELQITLAAIH PWLVTSSNCC TKFFNPQELS EIGKLKHDAK KGSKVMFVLN LIFRVVKREK ILIFCHNIAP IRMFTELFEN
1101: IFRWQRGREI LTLTGDLELF ERGRVIDKFE EPGNPSRVLL ASITACAEGI SLTAASRVIM LDSEWNPSKT KQAIARAFRP GQQKVVYVYQ LLSRGTLEED
1201: KYRRTTWKEW VSCMIFSEEF VADPSLWQAE KIEDDILREI VGEDKVKSFH MIMKNEKAST G
Arabidopsis Description
CLSY2SNF2 domain-containing protein CLASSY 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K493]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.