Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G087600.1 | Wheat | nucleus | 94.58 | 94.43 |
| TraesCS2A01G089500.1 | Wheat | plastid | 93.3 | 92.78 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 92.03 | 91.3 |
| KXG37026 | Sorghum | nucleus | 63.48 | 64.72 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 62.6 | 58.85 |
| GSMUA_Achr8P01860_001 | Banana | nucleus | 39.08 | 45.37 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 34.53 | 34.12 |
| PGSC0003DMT400061540 | Potato | nucleus | 34.61 | 33.75 |
| Solyc06g050510.2.1 | Tomato | nucleus | 34.61 | 33.72 |
| AT3G42670.4 | Thale cress | nucleus | 33.33 | 33.23 |
| KRG97679 | Soybean | nucleus | 32.38 | 32.87 |
| AT5G20420.1 | Thale cress | cytosol | 32.85 | 32.67 |
| Bra021058.1-P | Field mustard | nucleus | 32.93 | 32.49 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 31.1 | 32.37 |
| KRH73247 | Soybean | nucleus | 33.57 | 32.14 |
| CDX92463 | Canola | nucleus | 32.22 | 31.94 |
| CDY56857 | Canola | cytosol | 32.14 | 31.86 |
| Bra002302.1-P | Field mustard | cytosol | 31.26 | 31.46 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 17.78 | 23.33 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 16.99 | 23.25 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 17.62 | 23.14 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 18.9 | 22.34 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 4.7 | 17.61 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 18.98 | 15.94 |
| TraesCS2B01G222000.1 | Wheat | plastid | 10.05 | 14.53 |
| Os04t0692750-01 | Rice | cytosol | 10.37 | 13.17 |
| TraesCS6B01G351900.1 | Wheat | nucleus | 9.97 | 12.46 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 11.24 | 11.04 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 13.4 | 10.59 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 11.48 | 6.96 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.1.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF792 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS2B01G105400 | EnsemblPlants:TraesCS2B01G105400.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:66019906..66024713
Molecular Weight (calculated)
143161.0 Da
IEP (calculated)
8.782
GRAVY (calculated)
-0.479
Length
1254 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEDTLKGGP KGLRSHPISE TPFEAFYDGS WHEVNCIRVR NGGLFVKFYS GSTVEHNVDG DHLRLRSRRA TYFDCSHVLK PGVDICVQSS HPLQGNPTGE
0101: MKFSMLLCHD ARLITIKRTH IEDQCLCLFV VMLRKNLCPD NTENRKVISD RKEQVVTLKN IFLLQKLQPE ELHEGSIQWS CAEDCLSHNR SKLLSARFSQ
0201: EIAHLIVLSI LNGMEFTIKL VEGNIIYRII KGGRASCNLD SMSTPPGFGN NMEIVSFQLR NEALRPIIRN IPVTHPKKHN LTEDMRFTMK AELDGQLEDR
0301: RFTVKTELDG LLDVFSYEEV DLRRSKRRKT QAERFTSYET PNFGRDRWKR CDAPSTKHGN SQRASRRDSP VAVESTYGEV PVNITRKQTS ATAFVVKENP
0401: NSAEGKHKST ARITPVKGKP SSVEVKEEST VEERSPGPHV PRTPAKSKER NLRPLLSLRR KSFTSSRSLN GNSEPAFGRK RKERMCEREY KKMINQCIGN
0501: IQSEMERDFE FNLGVPMMNY GQGFYGEVNF TWPASADNDS QEEKDGLEEF WKEMDHSLTT LALEKNQDSH SEAVHEATAG LGKSEENPCE HDCMLDEGLG
0601: LVCRLCNVVC VEIKHIFPQM ANGNGYNKER PGCRNIDHDD LVLDPSLLAI LGPEFSELKG SGNLWSLIPD LEPKLLPHQR NAFEFIWKNL AGSLQLEEMD
0701: NPTASTGGCV VAHTPGSGKT LLLISFLVSY LKVHPRSRPL VLTPKSAIHT WMREFEKWGI SLPLHVLHQA DKRGKPMGPI DPRLQAILSN FRRPNWKNIC
0801: LVDRLDKLCK WHEHPSVLLM TYSSFLRLAK EDSRMPQRAF MVQVLINNPG LLILDEGHNP RSNKSKLRRV LMKVKTEFRI LMSGTVFQNN FEEYFNTLSL
0901: ARPRFVDDVM TVLVPERKKE TRGRRAKHRE AVARRIFVDR VGQMIESSDN WDRQGGISLL NKLTCGFIDS FEGSKLRSLP GIHVYTLFMK PTEIQEDILS
1001: RISMATSCGG RYLLEVELLI TIASIHPWLI KTTKSSSTYF TPEELHKVDK YKRDFVVGCK AKFLIDLLHK SSYRGERVLI FCHNVSPISF LVELIENVFG
1101: WRLGEEVLVL QGDQELPVRS DVMDKFNTDS QGKRKVLIAS TTACAEGISL TGASRLVMLD SEWNHSKTRQ AIARAFRPGQ ERTVYVYLLV ASGTWEEDKY
1201: SRNRRKAWMA KMVFHGRYFD DPLRKAVTDF NDDILKELAD EDKTKTFHMI VKQD
0101: MKFSMLLCHD ARLITIKRTH IEDQCLCLFV VMLRKNLCPD NTENRKVISD RKEQVVTLKN IFLLQKLQPE ELHEGSIQWS CAEDCLSHNR SKLLSARFSQ
0201: EIAHLIVLSI LNGMEFTIKL VEGNIIYRII KGGRASCNLD SMSTPPGFGN NMEIVSFQLR NEALRPIIRN IPVTHPKKHN LTEDMRFTMK AELDGQLEDR
0301: RFTVKTELDG LLDVFSYEEV DLRRSKRRKT QAERFTSYET PNFGRDRWKR CDAPSTKHGN SQRASRRDSP VAVESTYGEV PVNITRKQTS ATAFVVKENP
0401: NSAEGKHKST ARITPVKGKP SSVEVKEEST VEERSPGPHV PRTPAKSKER NLRPLLSLRR KSFTSSRSLN GNSEPAFGRK RKERMCEREY KKMINQCIGN
0501: IQSEMERDFE FNLGVPMMNY GQGFYGEVNF TWPASADNDS QEEKDGLEEF WKEMDHSLTT LALEKNQDSH SEAVHEATAG LGKSEENPCE HDCMLDEGLG
0601: LVCRLCNVVC VEIKHIFPQM ANGNGYNKER PGCRNIDHDD LVLDPSLLAI LGPEFSELKG SGNLWSLIPD LEPKLLPHQR NAFEFIWKNL AGSLQLEEMD
0701: NPTASTGGCV VAHTPGSGKT LLLISFLVSY LKVHPRSRPL VLTPKSAIHT WMREFEKWGI SLPLHVLHQA DKRGKPMGPI DPRLQAILSN FRRPNWKNIC
0801: LVDRLDKLCK WHEHPSVLLM TYSSFLRLAK EDSRMPQRAF MVQVLINNPG LLILDEGHNP RSNKSKLRRV LMKVKTEFRI LMSGTVFQNN FEEYFNTLSL
0901: ARPRFVDDVM TVLVPERKKE TRGRRAKHRE AVARRIFVDR VGQMIESSDN WDRQGGISLL NKLTCGFIDS FEGSKLRSLP GIHVYTLFMK PTEIQEDILS
1001: RISMATSCGG RYLLEVELLI TIASIHPWLI KTTKSSSTYF TPEELHKVDK YKRDFVVGCK AKFLIDLLHK SSYRGERVLI FCHNVSPISF LVELIENVFG
1101: WRLGEEVLVL QGDQELPVRS DVMDKFNTDS QGKRKVLIAS TTACAEGISL TGASRLVMLD SEWNHSKTRQ AIARAFRPGQ ERTVYVYLLV ASGTWEEDKY
1201: SRNRRKAWMA KMVFHGRYFD DPLRKAVTDF NDDILKELAD EDKTKTFHMI VKQD
0001: MKRKHYFEFN HPFNPCPFEV FCWGTWKAVE YLRIENGTMT MRLLENGQVL DDIKPFQRLR IRSRKATLID CTSFLRPGID VCVLYQRDEE TPEPVWVDAR
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
0101: VLSIERKPHE SECLCTFHVS VYIDQGCIGL EKHRMNKVPV LVGLNEIAIL QKFCKEQSLD RYYRWRYSED CSSLVKTRLN LGKFLPDLTW LLVTSVLKNI
0201: VFQIRTVHEK MVYQIVTDED CEGSSSSLSA MNITVEDGVV MSKVVLFNPA EDTCQDSDVK EEIEEEVMEL RRSKRRSGRP ERYGDSEIQP DSKDGWVRMM
0301: PYRYNIWNVS SDDDDEEEDC EDDKDTDDDL YLPLSHLLRK KGSKKGFSKD KQREIVLVDK TERKKRKKTE GFSRSCELSV IPFTPVFEPI PLEQFGLNAN
0401: SLCGGVSGNL MDEIDKYRSK AAKYGKKKKK KIEMEEMESD LGWNGPIGNV VHKRNGPHSR IRSVSRETGV SEEPQIYKKR TLSAGAYNKL IDSYMSRIDS
0501: TIAAKDKATN VVEQWQGLKN PASFSIEAEE RLSEEEEDDG ETSENEILWR EMELCLASSY ILDDHEVRVD NEAFHKATCD CEHDYELNEE IGMCCRLCGH
0601: VGTEIKHVSA PFARHKKWTT ETKQINEDDI NTTIVNQDGV ESHTFTIPVA SSDMPSAEES DNVWSLIPQL KRKLHLHQKK AFEFLWKNLA GSVVPAMMDP
0701: SSDKIGGCVV SHTPGAGKTF LIIAFLASYL KIFPGKRPLV LAPKTTLYTW YKEFIKWEIP VPVHLLHGRR TYCMSKEKTI QFEGIPKPSQ DVMHVLDCLD
0801: KIQKWHAQPS VLVMGYTSFL TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVDT DLRILLSGTL FQNNFCEYFN TLCLARPKFV
0901: HEVLVELDKK FQTNQAEQKA PHLLENRARK FFLDIIAKKI DTKVGDERLQ GLNMLRNMTS GFIDNYEGSG SGSGDVLPGL QIYTLLMNST DVQHKSLTKL
1001: QNIMSTYHGY PLELELLITL AAIHPWLVKT TTCCAKFFNP QELLEIEKLK HDAKKGSKVM FVLNLVFRVV KREKILIFCH NIAPIRLFLE LFENVFRWKR
1101: GRELLTLTGD LELFERGRVI DKFEEPGGQS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT
1201: WKEWVSSMIF SEEFVEDPSQ WQAEKIEDDV LREIVEEDKV KSFHMIMKNE KASTGG
Arabidopsis Description
CHR38Chromatin remodeling 38 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.