Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G189900.1 | Wheat | nucleus | 96.83 | 93.17 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 95.41 | 89.64 |
| TraesCS2A01G182200.1 | Wheat | plastid | 96.4 | 84.99 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 58.41 | 79.61 |
| Os06t0255700-01 | Rice | cytosol | 69.1 | 66.91 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 45.96 | 65.17 |
| KXG24379 | Sorghum | cytosol | 65.61 | 61.96 |
| Zm00001d024677_P003 | Maize | cytosol | 64.08 | 61.79 |
| Zm00001d049605_P037 | Maize | cytosol | 64.85 | 60.8 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 32.64 | 56.63 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 40.94 | 55.07 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 12.12 | 50.23 |
| KRH27453 | Soybean | cytosol | 44.98 | 46.66 |
| AT2G16390.2 | Thale cress | nucleus | 44.0 | 45.23 |
| Bra021841.1-P | Field mustard | cytosol | 37.55 | 45.03 |
| CDX89710 | Canola | nucleus | 41.92 | 44.44 |
| Solyc01g109970.2.1 | Tomato | extracellular | 43.56 | 43.99 |
| PGSC0003DMT400079488 | Potato | nucleus | 43.67 | 43.24 |
| KRH20806 | Soybean | cytosol | 44.65 | 42.92 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 44.43 | 42.8 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 42.9 | 41.11 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 39.74 | 41.04 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 42.36 | 40.63 |
| Bra000888.1-P | Field mustard | cytosol | 17.25 | 34.42 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 23.91 | 20.64 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 23.25 | 16.99 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 5.9 | 16.12 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 23.69 | 14.53 |
| TraesCS2B01G222000.1 | Wheat | plastid | 13.65 | 14.42 |
| TraesCS6B01G351900.1 | Wheat | nucleus | 12.88 | 11.76 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 17.36 | 10.02 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 13.65 | 9.79 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 13.1 | 5.8 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF807 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2B01G208700 | EnsemblPlants:TraesCS2B01G208700.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:190012280..190020183
Molecular Weight (calculated)
103297.0 Da
IEP (calculated)
6.162
GRAVY (calculated)
-0.478
Length
916 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAPGEEPP AAPSGMYYHR KRKTSDPISG LSLPSAKMVG NWGFGSVTKD WEKQKNSEVL IILDSDNEDE SMATYKQLTP EKNKQLSFEK NKQLIPSEQA
101: GTLTACVATQ GIADLNETMR DGDQNSHIVP YGQSATFMNQ YPLLRYQPSV QFERVVLQER PEKERAHDLA VASHAEKMAE TLVFPALPKE RKQRKYDPSS
201: QTDGDAEAGP RKRKRKGKNE AGAPVFDLPS ETYNPVEEDD YDEPMEEEDK PENESDGLDG FWNEYSLALE SSKLDTPEEA DSEKEVGEKE VDNGCSHDIR
301: IHEDLGHVCR VCGMIVRRAD MIFDYQWKKP SRSRSYFSET RSKDSDDIVI GDVRVTEELM ALDVAIHPRH AKQMRAHQLA GFHFLVKNLV SDKPGGCILA
401: HAPGSGKTFM LISFIQSFLA KYPSSRPLVI LPKGILGTWK REFQRWQVED IPLYDFYSVK AEKRAEQLEI LKSWQAKMSI LFLGYKQFSQ IVCSDGGGNV
501: AAACRDMLLK VPSLLIMDEG HTPRNRETDV LESLSRVQTP RKVVLSGTLF QNHVSEVFNI LNLVRPKFLK SDSSRPIVKR IMSQVAISGG RISKGAADNA
601: FTESIEETLL HDDNFTRKAH VIRSLRELTK DVLHYYKGDI LDELPGLVDF SVFLKLSPRQ KEIVHKLESY EKFKRSAVGT AVYMHPCLSG MSEVDAADRA
701: INLTDASIDS LVESINVTDG VKARFFTNIL ALANSAGEKV LAFGQYILPM KFLERLLVKT RGWNVGKEIF VINGDTSQEE RELATDQFNN SADAKVLFGS
801: IRACGEGISL VGASRVVILD VHLNPSVTRQ AIGRAFRPGQ QKKVFVYRLV AADSQEESFH QTAFKKEVIP KLWFEWSEQH CTSDDFRLNK VDIDDCEDEL
901: LDNKAMRQDI KVLYKR
101: GTLTACVATQ GIADLNETMR DGDQNSHIVP YGQSATFMNQ YPLLRYQPSV QFERVVLQER PEKERAHDLA VASHAEKMAE TLVFPALPKE RKQRKYDPSS
201: QTDGDAEAGP RKRKRKGKNE AGAPVFDLPS ETYNPVEEDD YDEPMEEEDK PENESDGLDG FWNEYSLALE SSKLDTPEEA DSEKEVGEKE VDNGCSHDIR
301: IHEDLGHVCR VCGMIVRRAD MIFDYQWKKP SRSRSYFSET RSKDSDDIVI GDVRVTEELM ALDVAIHPRH AKQMRAHQLA GFHFLVKNLV SDKPGGCILA
401: HAPGSGKTFM LISFIQSFLA KYPSSRPLVI LPKGILGTWK REFQRWQVED IPLYDFYSVK AEKRAEQLEI LKSWQAKMSI LFLGYKQFSQ IVCSDGGGNV
501: AAACRDMLLK VPSLLIMDEG HTPRNRETDV LESLSRVQTP RKVVLSGTLF QNHVSEVFNI LNLVRPKFLK SDSSRPIVKR IMSQVAISGG RISKGAADNA
601: FTESIEETLL HDDNFTRKAH VIRSLRELTK DVLHYYKGDI LDELPGLVDF SVFLKLSPRQ KEIVHKLESY EKFKRSAVGT AVYMHPCLSG MSEVDAADRA
701: INLTDASIDS LVESINVTDG VKARFFTNIL ALANSAGEKV LAFGQYILPM KFLERLLVKT RGWNVGKEIF VINGDTSQEE RELATDQFNN SADAKVLFGS
801: IRACGEGISL VGASRVVILD VHLNPSVTRQ AIGRAFRPGQ QKKVFVYRLV AADSQEESFH QTAFKKEVIP KLWFEWSEQH CTSDDFRLNK VDIDDCEDEL
901: LDNKAMRQDI KVLYKR
001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.