Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29038 | Canola | nucleus | 17.25 | 95.45 |
| CDY59589 | Canola | nucleus | 16.74 | 92.61 |
| CDX93009 | Canola | nucleus | 91.89 | 92.27 |
| CDX77430 | Canola | nucleus | 58.83 | 85.14 |
| CDY66441 | Canola | nucleus | 76.69 | 72.31 |
| AT3G24340.1 | Thale cress | nucleus | 63.14 | 54.33 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 32.85 | 49.61 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 16.84 | 46.46 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 20.64 | 44.67 |
| KRH39939 | Soybean | nucleus | 28.03 | 44.25 |
| GSMUA_Achr7P06840_001 | Banana | nucleus | 32.24 | 33.3 |
| Os02t0650800-00 | Rice | cytosol | 30.8 | 32.02 |
| KRH23851 | Soybean | mitochondrion, nucleus | 37.78 | 31.56 |
| KRH46527 | Soybean | nucleus | 36.96 | 31.36 |
| CDY47279 | Canola | nucleus | 43.02 | 31.34 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 38.6 | 30.18 |
| CDY10115 | Canola | nucleus | 42.71 | 30.17 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 31.42 | 28.98 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 31.42 | 28.84 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 31.21 | 28.76 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 9.75 | 26.76 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 29.26 | 26.24 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 30.6 | 26.16 |
| CDY67491 | Canola | cytosol | 4.11 | 25.32 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 32.55 | 24.96 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 32.24 | 24.69 |
| KXG31163 | Sorghum | nucleus | 31.62 | 24.1 |
| CDY37734 | Canola | nucleus | 18.48 | 23.81 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 35.63 | 23.37 |
| CDY23754 | Canola | cytosol | 18.48 | 23.35 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 35.42 | 23.28 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 34.29 | 23.28 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 35.42 | 23.17 |
| Zm00001d051324_P001 | Maize | nucleus | 31.72 | 23.11 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 35.42 | 23.11 |
| OQU77943 | Sorghum | mitochondrion | 33.88 | 22.63 |
| CDX89710 | Canola | nucleus | 19.3 | 21.76 |
| CDY16534 | Canola | nucleus | 9.45 | 21.1 |
| CDX78226 | Canola | cytosol | 3.8 | 20.0 |
| CDY56857 | Canola | cytosol | 24.44 | 18.81 |
| CDX92463 | Canola | nucleus | 24.23 | 18.66 |
| CDX92308 | Canola | nucleus | 13.45 | 14.38 |
| CDX99258 | Canola | nucleus | 13.24 | 14.22 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.86 | 11.78 |
| CDX92882 | Canola | nucleus | 13.55 | 11.69 |
| CDY51705 | Canola | nucleus | 13.76 | 11.56 |
| CDY43772 | Canola | mitochondrion | 13.65 | 11.47 |
| CDX95047 | Canola | nucleus | 15.61 | 10.27 |
| CDX93550 | Canola | nucleus | 15.61 | 10.18 |
| CDY22674 | Canola | nucleus | 7.08 | 8.96 |
| CDY37413 | Canola | mitochondrion, nucleus | 12.42 | 7.55 |
| CDY32510 | Canola | mitochondrion, nucleus | 12.22 | 7.41 |
| CDX73492 | Canola | mitochondrion | 12.22 | 5.72 |
| CDX78225 | Canola | mitochondrion | 8.73 | 4.21 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.21 | 1.85 |
| CDY06321 | Canola | nucleus | 1.03 | 1.72 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078E5X2 | EnsemblPlants:CDX94823 | ProteinID:CDX94823 |
| ProteinID:CDX94823.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00158321001 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF858 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0004EDB17B |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g43650D
Coordinates
chrLK031885:+:309227..312417
Molecular Weight (calculated)
111449.0 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.669
Length
974 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMTTCVGRR TRSRTESYLN DLLNQSKGVS VADQSKSRTG RQKKKRASAP APAPLRDSCS PEKSKRRRKR KRKDDDDVEF VGTIYPKSKR EKEHVVVVED
101: DNVGSPLVIA LSSESDRACG VTVDDAMGDD DGDVEFVRTI YPEDVDSSDY TEKISDSSYY AESSDSGEDD EFGGARDTAT VKKKSPTKSI WQRKKIVEED
201: ISFEDETAEV DTREDPTVRE RSNDKVHEQR KRKRFYMEKK KNRSNVFDLL GDSFESFDVG ENPWVSPPIN LRFGCEEPEP VEKTEEEKEV DRLWQDMALA
301: LSLEGLHSST YFKNEDVSCS NGKHDFVLDE EIGLKCRYCS YVSIEMKDVS PAMYRANVKY RDTVNYKKTC RNKGDPLLDS LDLEASGHNS NLASLKKIQG
401: TVWEYIPGIK NTLYPHQQEG FEFMWKNLAG TTKLHELKSS SVVKESGGCI ISHSPGTGKT RLTIVFLQSY LQQFPDSHPV VIAPASLLLT WEEEFKKWNS
501: NIPFYNMSNQ ELSGLENPSA VSLLNGSRQH RSKKDSVRMV KLYSWRNKKS ILGISYSLYE KLTGNKCASG ETQKFRKMLL DFPGLLVLDE GHTPRNNNSC
601: IWKVLTEVKT EKRIILSGTP FQNNFKEISN VLCLTRPAYK DKISSRLHDL TRLSQEGKNG RFDEEIGIAE LKDMIAPFVH VHKGNILRES LPGLRDCVVV
701: LNAPFQQAKI LTRIDHSENT LELEHKLSAV SVHPSLYLRR KQTDKERLTI GPVVLKSLER LTLDSKEGAK TRFLIDFIRF SDTVKEKVLV FSQHIDTLEL
801: IRDQLSAVFG WTEGEEILYM HGQLQQKFRQ RLINNFNKSD SKSKLLLAST KACSEGINLV GASRVVLLDV DWNPSVERQA ISRAYRIGQK RVVYTYHLMV
901: KGTTEWDKYC KQNKKHRISE MVFSPTNEKD KLIGNEVVSE DKILDEMVRH EKLKDMFEKI LYRKTESDMF TNIL
101: DNVGSPLVIA LSSESDRACG VTVDDAMGDD DGDVEFVRTI YPEDVDSSDY TEKISDSSYY AESSDSGEDD EFGGARDTAT VKKKSPTKSI WQRKKIVEED
201: ISFEDETAEV DTREDPTVRE RSNDKVHEQR KRKRFYMEKK KNRSNVFDLL GDSFESFDVG ENPWVSPPIN LRFGCEEPEP VEKTEEEKEV DRLWQDMALA
301: LSLEGLHSST YFKNEDVSCS NGKHDFVLDE EIGLKCRYCS YVSIEMKDVS PAMYRANVKY RDTVNYKKTC RNKGDPLLDS LDLEASGHNS NLASLKKIQG
401: TVWEYIPGIK NTLYPHQQEG FEFMWKNLAG TTKLHELKSS SVVKESGGCI ISHSPGTGKT RLTIVFLQSY LQQFPDSHPV VIAPASLLLT WEEEFKKWNS
501: NIPFYNMSNQ ELSGLENPSA VSLLNGSRQH RSKKDSVRMV KLYSWRNKKS ILGISYSLYE KLTGNKCASG ETQKFRKMLL DFPGLLVLDE GHTPRNNNSC
601: IWKVLTEVKT EKRIILSGTP FQNNFKEISN VLCLTRPAYK DKISSRLHDL TRLSQEGKNG RFDEEIGIAE LKDMIAPFVH VHKGNILRES LPGLRDCVVV
701: LNAPFQQAKI LTRIDHSENT LELEHKLSAV SVHPSLYLRR KQTDKERLTI GPVVLKSLER LTLDSKEGAK TRFLIDFIRF SDTVKEKVLV FSQHIDTLEL
801: IRDQLSAVFG WTEGEEILYM HGQLQQKFRQ RLINNFNKSD SKSKLLLAST KACSEGINLV GASRVVLLDV DWNPSVERQA ISRAYRIGQK RVVYTYHLMV
901: KGTTEWDKYC KQNKKHRISE MVFSPTNEKD KLIGNEVVSE DKILDEMVRH EKLKDMFEKI LYRKTESDMF TNIL
0001: MDMTSCVARR TRSRTESYLN SILNKSKGIS GEEEDQSLGC VNSRTEKRRV NMRDACSPSP RKKKRRRRKD DDDDVVFVRT EYPEGKRDDE NVGSTSGNLQ
0101: SKSFDFGDRV CDFDADDRNL GCEEKASNFN PIDDDDDVVF VGTVQRENDH VEDDDNVGSA SVISPRVCDF DEDDAKVSGK ENPLSPDDDD DVVFLGTIAG
0201: ENQHVEDVNA GSEVCDILLD DANLRGEEKT YVSDEVVSLS SSSDDEEDPL EELGTDSREE VSGEDRDSGE SDMDEDANDS DSSDYVGESS DSSDVESSDS
0301: DFVCSEDEEG GTRDDATCEK NPSEKVYHHK KSRTFRRKHN FDVINLLAKS MLESKDVFKE DIFSWDKIAE VDSREDPVVR ESSSEKVNEH GKPRERRSFH
0401: RVREKNHLNG ESFYGGEKLC DGEETINYST EDSPPLNLRF GCEEPVLIEK TEEEKELDSL WEDMNVALTL EGMHSSTPDK NGDMLCSKGT HDFVLDDEIG
0501: LKCVHCAYVA VEIKDISPAM DKYRPSVNDN KKCSDRKGDP LPNRLEFDAS DPSSFVAPLD NIEGTVWQYV PGIKDTLYPH QQEGFEFIWK NLAGTTKINE
0601: LNSVGVKGSG GCIISHKAGT GKTRLTVVFL QSYLKRFPNS HPMVIAPATL MRTWEDEVRK WNVNIPFYNM NSLQLSGYED AEAVSRLEGN RHHNSIRMVK
0701: LVSWWKQKSI LGISYPLYEK LAANKNTEGM QVFRRMLVEL PGLLVLDEGH TPRNQSSLIW KVLTEVRTEK RIFLSGTLFQ NNFKELSNVL CLARPADKDT
0801: ISSRIHELSK CSQEGEHGRV NEENRIVDLK AMIAHFVHVH EGTILQESLP GLRDCVVVLN PPFQQKKILD RIDTSQNTFE FEHKLSAVSV HPSLYLCCNP
0901: TKKEDLVIGP ATLGTLKRLR LKYEEGVKTK FLIDFIRISG TVKEKVLVYS QYIDTLKLIM EQLIAECDWT EGEQILLMHG KVEQRDRQHM IDNFNKPDSG
1001: SKVLLASTKA CSEGISLVGA SRVVILDVVW NPSVESQAIS RAFRIGQKRA VFIYHLMVKD TSEWNKYCKQ SEKHRISELV FSSTNEKDKP INNEVVSKDR
1101: ILDEMVRHEK LKHIFEKILY HPKKSDMNTS FF
0101: SKSFDFGDRV CDFDADDRNL GCEEKASNFN PIDDDDDVVF VGTVQRENDH VEDDDNVGSA SVISPRVCDF DEDDAKVSGK ENPLSPDDDD DVVFLGTIAG
0201: ENQHVEDVNA GSEVCDILLD DANLRGEEKT YVSDEVVSLS SSSDDEEDPL EELGTDSREE VSGEDRDSGE SDMDEDANDS DSSDYVGESS DSSDVESSDS
0301: DFVCSEDEEG GTRDDATCEK NPSEKVYHHK KSRTFRRKHN FDVINLLAKS MLESKDVFKE DIFSWDKIAE VDSREDPVVR ESSSEKVNEH GKPRERRSFH
0401: RVREKNHLNG ESFYGGEKLC DGEETINYST EDSPPLNLRF GCEEPVLIEK TEEEKELDSL WEDMNVALTL EGMHSSTPDK NGDMLCSKGT HDFVLDDEIG
0501: LKCVHCAYVA VEIKDISPAM DKYRPSVNDN KKCSDRKGDP LPNRLEFDAS DPSSFVAPLD NIEGTVWQYV PGIKDTLYPH QQEGFEFIWK NLAGTTKINE
0601: LNSVGVKGSG GCIISHKAGT GKTRLTVVFL QSYLKRFPNS HPMVIAPATL MRTWEDEVRK WNVNIPFYNM NSLQLSGYED AEAVSRLEGN RHHNSIRMVK
0701: LVSWWKQKSI LGISYPLYEK LAANKNTEGM QVFRRMLVEL PGLLVLDEGH TPRNQSSLIW KVLTEVRTEK RIFLSGTLFQ NNFKELSNVL CLARPADKDT
0801: ISSRIHELSK CSQEGEHGRV NEENRIVDLK AMIAHFVHVH EGTILQESLP GLRDCVVVLN PPFQQKKILD RIDTSQNTFE FEHKLSAVSV HPSLYLCCNP
0901: TKKEDLVIGP ATLGTLKRLR LKYEEGVKTK FLIDFIRISG TVKEKVLVYS QYIDTLKLIM EQLIAECDWT EGEQILLMHG KVEQRDRQHM IDNFNKPDSG
1001: SKVLLASTKA CSEGISLVGA SRVVILDVVW NPSVESQAIS RAFRIGQKRA VFIYHLMVKD TSEWNKYCKQ SEKHRISELV FSSTNEKDKP INNEVVSKDR
1101: ILDEMVRHEK LKHIFEKILY HPKKSDMNTS FF
Arabidopsis Description
CLSY4SNF2 domain-containing protein CLASSY 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.