CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39939	Soybean	nucleus	40.42	75.2
KRH23851	Soybean	mitochondrion, nucleus	75.78	74.61
Solyc08g077650.1.1	Tomato	cytosol	3.22	71.15
KRH46528	Soybean	cytosol, extracellular, nucleus	63.76	58.75
PGSC0003DMT400033315	Potato	nucleus	6.45	51.03
VIT_02s0012g00110.t01	Wine grape	cytosol	27.79	49.46
CDX77430	Canola	nucleus	28.66	48.89
CDY59589	Canola	nucleus	7.49	48.86
CDY29038	Canola	nucleus	7.32	47.73
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	14.29	46.46
PGSC0003DMT400096321	Potato	nucleus	5.05	46.4
Solyc08g077580.1.1	Tomato	cytosol	6.88	45.66
Os05t0392400-01	Rice	cytosol, nucleus	17.51	44.67
Solyc04g054440.1.1	Tomato	nucleus	25.35	44.43
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	6.62	43.68
PGSC0003DMT400017302	Potato	nucleus	22.82	42.05
Solyc01g068320.1.1	Tomato	cytosol	24.3	41.77
Solyc01g068300.1.1	Tomato	cytosol	14.11	41.54
Solyc08g077610.1.1	Tomato	nucleus	24.04	41.26
Solyc02g033050.1.1	Tomato	nucleus	22.56	41.18
Solyc08g061370.1.1	Tomato	cytosol	6.18	40.8
Solyc08g062060.1.1	Tomato	nucleus	3.75	40.57
Solyc08g077690.2.1	Tomato	nucleus	25.96	40.22
Solyc08g061410.1.1	Tomato	cytosol	15.07	39.41
Solyc01g060460.1.1	Tomato	nucleus	25.96	39.16
Solyc03g061640.1.1	Tomato	cytosol	5.66	39.16
PGSC0003DMT400088837	Potato	cytosol	6.36	38.62
Solyc08g061390.1.1	Tomato	cytosol	8.19	37.9
CDX94823	Canola	nucleus	31.36	36.96
CDX93009	Canola	nucleus	31.1	36.8
Solyc08g062000.1.1	Tomato	cytosol	12.2	35.81
CDY66441	Canola	nucleus	32.06	35.62
Bra015035.1-P	Field mustard	nucleus	32.23	35.51
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	7.32	34.85
PGSC0003DMT400090992	Potato	mitochondrion	7.23	33.88
Solyc08g061350.1.1	Tomato	mitochondrion	2.09	33.8
Bra001944.1-P	Field mustard	nucleus	31.36	33.77
PGSC0003DMT400004629	Potato	nucleus	26.22	33.74
Solyc08g061990.1.1	Tomato	mitochondrion	11.24	33.51
GSMUA_Achr7P06840_001	Banana	nucleus	27.18	33.09
Solyc08g077600.1.1	Tomato	cytosol	11.32	33.08
Solyc08g061340.1.1	Tomato	cytosol	6.36	32.74
PGSC0003DMT400085993	Potato	cytosol	4.7	32.14
AT3G24340.1	Thale cress	nucleus	31.62	32.07
Os02t0650800-00	Rice	cytosol	26.13	32.02
PGSC0003DMT400004673	Potato	nucleus	25.26	31.66
Solyc08g077670.1.1	Tomato	cytosol	12.2	30.91
PGSC0003DMT400004672	Potato	nucleus	26.57	30.65
TraesCS3A01G220700.1	Wheat	nucleus	27.7	30.11
TraesCS3A01G238800.1	Wheat	nucleus	27.44	29.8
TraesCS3B01G251000.1	Wheat	nucleus	27.53	29.78
CDY47279	Canola	nucleus	33.28	28.57
Solyc08g062070.1.1	Tomato	cytosol	3.22	27.82
AT1G05490.1	Thale cress	mitochondrion, nucleus	34.06	27.73
CDY10115	Canola	nucleus	33.01	27.48
HORVU6Hr1G061720.1	Barley	cytosol	8.36	27.04
PGSC0003DMT400085944	Potato	cytosol	5.49	26.81
PGSC0003DMT400037430	Potato	nucleus	15.68	26.79
TraesCS6A01G241100.1	Wheat	nucleus	26.31	26.51
PGSC0003DMT400017313	Potato	nucleus	27.7	26.39
TraesCS3D01G231800.1	Wheat	nucleus	28.75	25.98
TraesCS2D01G053900.1	Wheat	nucleus	24.3	25.69
PGSC0003DMT400038789	Potato	nucleus	24.22	25.14
HORVU3Hr1G054100.2	Barley	nucleus	27.79	25.08
KXG31163	Sorghum	nucleus	27.53	24.73
Bra015430.1-P	Field mustard	nucleus	33.54	24.32
KRH05276	Soybean	cytosol, nucleus	5.23	24.19
HORVU1Hr1G062970.3	Barley	mitochondrion	30.84	23.89
Zm00001d051324_P001	Maize	nucleus	27.7	23.78
TraesCS1B01G256700.1	Wheat	mitochondrion, nucleus	30.84	23.71
TraesCS1D01G245400.1	Wheat	nucleus	30.66	23.7
TraesCS1A01G245700.1	Wheat	mitochondrion, nucleus	30.57	23.57
Zm00001d038113_P001	Maize	mitochondrion, nucleus	29.44	23.55
OQU77943	Sorghum	mitochondrion	29.36	23.11
KRH27453	Soybean	cytosol	17.68	22.99
KRH20806	Soybean	cytosol	17.77	21.41
KRG97679	Soybean	nucleus	22.47	20.89
KRH32203	Soybean	cytosol, mitochondrion, nucleus	4.97	20.65
KRG88505	Soybean	endoplasmic reticulum, nucleus	21.52	20.5
KRH73247	Soybean	nucleus	21.95	19.24
KRH59600	Soybean	cytosol, nucleus, plastid	11.06	16.2
KRH77966	Soybean	nucleus	11.15	14.22
KRH25617	Soybean	nucleus	10.63	14.02
KRH40956	Soybean	nucleus	12.46	13.88
KRH34128	Soybean	nucleus	12.98	13.2
KRG92726	Soybean	nucleus	15.07	11.65
KRH19578	Soybean	nucleus	11.76	11.02
KRH28211	Soybean	mitochondrion	0.61	7.61
KRH77275	Soybean	cytosol	0.61	7.61
KRH40039	Soybean	mitochondrion	12.8	7.18
KRH23760	Soybean	mitochondrion	12.63	7.08
HORVU3Hr1G014620.1	Barley	nucleus	0.52	5.56
Os02t0762600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100806733	MapMan:16.10.1.2	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EMBL:ACUP02005348	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G339800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	UniProt:K7LAJ5	EnsemblPlants:KRH46527
ProteinID:KRH46527	ProteinID:KRH46527.1	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192
PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF858	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf
InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI000295AC62	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:45606368..45610884

Molecular Weight (calculated)

130286.0 Da

IEP (calculated)

5.357

GRAVY (calculated)

-0.707

Length

1148 amino acids

Sequence
(BLAST)

0001: MYVADRTRSK RGGVVGSGLI MGEKKKRVHD YHEEIVLEDN EEGASVKVEP GPGASSSSSS SGARALKRER VSEHGFQNLG GRADDPIKIS DSEDDDGEEG
0101: LSDFEKKRFL GEEEKERKSE EGKGCGGEKK HAVAESGSND EGYDSLLSSL SESENAVTSD EDFQVDDDGN ESHYYSSSDS SSYDDGERGG CRKMVKERVR
0201: KVESETESSV VYKRKGERKD IELVEEEEPR IGADCSSATS NKSEIYKEEP GHGAQKHKVK RVESVNADAF GDHSESSDHS MQSEAEALEH MKKRDRDHQN
0301: VSLENKAGDS AVVKMSEKND NVDAGKVGEH KYEFNSNKRE KPEKVRVVDD ETDDKHELYE VLRMPSRTKN RCLKFFTECF WGENDSVKDD SNQLEEKDDD
0401: IDQGQTQPLA SRETVLVNWN FTKKELIEKS EFEKELDNLW GEMDMLLRVE EIGSQIDKVG ENEENSASQC KHDTIFNEEI GIYCRWCGWI HTEIKYITPP
0501: FVDNERSGRE ALSGGGKTSQ FDGVLFNDSV DDSEAVWSHN EGTVWDLIPD IKESLFPHQQ EGFEFIWTSL AGTIDLAELK RVDMHTEGGC IISHAPGTGK
0601: TKLTMVFLQT YLQLFPKCLP IIIAPANILL TWEDELRKWN LGIPFHNLNN AELSGNEQDI NEVDLSGNQR QNKDAIRMVK LCSWYKEKSI LLISYHLYER
0701: LARGLCEDDG KKEKKNKKMK KGKKRARTRE YIETAMGKVL RDYPGLLILD EGHTPRNQRS YIWKVLSESR SQKRVLLSGT PFQNNFLELY NILCLMKPSF
0801: PDSIPQELKK FCQSRLRKER KASKYASYEP IYSGNSADEK IKQLKSLMNP FVHVHKGSIL QKNLPGLRDC VLVLKPDRLQ QETLDIIDSS QNILNFEHKL
0901: ALVSVHPSLF LNCSLSKKEE SVLDKDQLEK LRLNPYVGVK TNFLLELVRL CDAVNEKVLV FSQFIDTLCL IKDQLESAFH WSVGTEVLYM YGKLDQKQKQ
1001: SLIHSFNDTN SKAKVLLASI KASSEGINLI GASRVVLLDV VWNPSVERQA ICRAYRLGQK KVVYTYHLLA QDTPECIKFC KQAEKDRLSE LVFSNKNAKS
1101: DKLNSCGAAL EDAVLDIMVQ HEKLKDMFGE LLVQPKERDF GDFGPLML

Best Arabidopsis Sequence Match ( AT1G05490.1 )
(BLAST)

0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP

Arabidopsis Description

CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.