Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92726 | Soybean | nucleus | 95.31 | 72.46 |
| Solyc04g050150.2.1 | Tomato | nucleus | 65.01 | 60.31 |
| AT1G08600.3 | Thale cress | nucleus | 61.56 | 46.99 |
| CDX95047 | Canola | nucleus | 59.96 | 45.74 |
| CDX93550 | Canola | nucleus | 59.7 | 45.14 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 55.71 | 42.13 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 55.89 | 42.09 |
| KXG38419 | Sorghum | nucleus | 54.83 | 41.74 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 55.0 | 41.73 |
| Zm00001d032801_P005 | Maize | nucleus | 54.3 | 41.31 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 55.89 | 39.76 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 7.97 | 32.61 |
| KRH05276 | Soybean | cytosol, nucleus | 6.47 | 29.44 |
| Bra018612.1-P | Field mustard | nucleus | 59.7 | 26.01 |
| KRH77966 | Soybean | nucleus | 17.71 | 22.22 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 14.7 | 21.17 |
| KRH25617 | Soybean | nucleus | 16.21 | 21.03 |
| KRH39939 | Soybean | nucleus | 10.01 | 18.31 |
| KRH40956 | Soybean | nucleus | 14.79 | 16.21 |
| KRH19578 | Soybean | nucleus | 17.18 | 15.84 |
| KRH27453 | Soybean | cytosol | 11.78 | 15.06 |
| KRH20806 | Soybean | cytosol | 12.13 | 14.38 |
| KRH23851 | Soybean | mitochondrion, nucleus | 13.55 | 13.12 |
| KRH46527 | Soybean | nucleus | 13.2 | 12.98 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 13.91 | 12.6 |
| KRG97679 | Soybean | nucleus | 13.2 | 12.06 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 12.67 | 11.87 |
| KRH73247 | Soybean | nucleus | 12.75 | 10.99 |
| KRH23760 | Soybean | mitochondrion | 16.83 | 9.28 |
| KRH40039 | Soybean | mitochondrion | 16.74 | 9.23 |
| KRH77275 | Soybean | cytosol | 0.09 | 1.09 |
| KRH28211 | Soybean | mitochondrion | 0.09 | 1.09 |
Protein Annotations
| MapMan:12.4.1.3.2 | Gene3D:3.40.50.10810 | UniProt:A0A0R0HUE5 | EMBL:ACUP02006582 | InterPro:ADD | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_10G165000 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR025766 | InterPro:IPR038718 | EnsemblPlants:KRH34128 |
| ProteinID:KRH34128 | ProteinID:KRH34128.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PFscan:PS51533 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF843 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF57903 | UniParc:UPI0006EDB906 | InterPro:Znf_FYVE_PHD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:39926919..39948408
Molecular Weight (calculated)
128732.0 Da
IEP (calculated)
7.852
GRAVY (calculated)
-0.511
Length
1129 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTPILLVEN HIQKPSSVDT LSPAMKEGTN NDGKIVSDNG KDTCVLMGAD NINVFDASHH LDKKNLRVLV LDADNKKCRI VIIDSGNEAE VSENKLDCNT
0101: QEVKEDLCNN GGDSLPSECL DEKFWCTVCD KVALEVHPHP FLKVITCGDC NCLLKEKTHK KDMGQDCSEG YCTWCGGSNE LVSCKLCKGL FCTKCLKKNL
0201: GVELYAGMQD TSWHCCSCHP NLLQKLSLQL EKAVGSADII VSSSGSDSDS SDDSDDSDDS DAKVNVTISS KRRHKKKIRR ILDDAELGEE TKRKIAIEKE
0301: RQERLKSLRG QFSASSFEMS SDGCNGNLSE SASVEVLGDA LAGYIVNVVR EKGEEAVRIP PSISAKLKAH QITGIRFMWE NIIQSIRKVK SGDKGLGCIL
0401: AHTMGLGKTF QVIAFLYTAM RCVDLGLRTA LIVTPVNVLH NWRQEFIKWR PSELKPLRVF MLEDVSRDRR PELLAKWRSK GGVFLIGYTA FRNLSFGKHV
0501: KDRHMAREIC HALQDGPDIL VCDEAHMIKN TKADVTQALK QVKCQRRIAL TGSPLQNNLM EYYCMVDFVR EGFLGSSHEF RNRYQNPIEN GQHTNSTLTD
0601: VKIMNQRSHI LYEQLKGFVQ RMDMNVVKKD LPPKTVFVIT VKLSPLQRKL YKRFLDVHGF TTQVHPEMLR KRCFFAGYQA LARIWNHPGI LQLTKEVKDY
0701: VKHEDAVENF LVDDSSSDEN SDYNVLAGEK MRYANDLLQR KDDNGFFLKG WWNDLLHGKI YKEIDHSGKM VLLMEILTMS SDVGDKVLVF SQSIPTLDLI
0801: ELYLSRIPRR SKREKFWKKG KDWYRLDGRT ESSERQKLVE RFNEPLNKRV KCTLISTRAG SLGINLHAAN RVVIVDGSWN PTYDLQAIYR SWRYGQKKPV
0901: FAYRLLAHGT MEEKIYKRQV TKEGLAARVV DRQQVHRTIS KEEMLHLFEF GDDDNPETLV DLSQDNEHQD NPILVGHSLK HTAPHSNGTS YSDKLMESLL
1001: SKHHPRWIAN YHEHESLLQE NEEEKLSKEE QDMAWEVYQK SLEWEEVQRV PLGESIMPEQ KPEMPIAMPQ NVSESCSILP TKLSRRFTIR KCTNLAHMLT
1101: LRSQGTKFGC STVCGECAQE IRWEDLKKR
0101: QEVKEDLCNN GGDSLPSECL DEKFWCTVCD KVALEVHPHP FLKVITCGDC NCLLKEKTHK KDMGQDCSEG YCTWCGGSNE LVSCKLCKGL FCTKCLKKNL
0201: GVELYAGMQD TSWHCCSCHP NLLQKLSLQL EKAVGSADII VSSSGSDSDS SDDSDDSDDS DAKVNVTISS KRRHKKKIRR ILDDAELGEE TKRKIAIEKE
0301: RQERLKSLRG QFSASSFEMS SDGCNGNLSE SASVEVLGDA LAGYIVNVVR EKGEEAVRIP PSISAKLKAH QITGIRFMWE NIIQSIRKVK SGDKGLGCIL
0401: AHTMGLGKTF QVIAFLYTAM RCVDLGLRTA LIVTPVNVLH NWRQEFIKWR PSELKPLRVF MLEDVSRDRR PELLAKWRSK GGVFLIGYTA FRNLSFGKHV
0501: KDRHMAREIC HALQDGPDIL VCDEAHMIKN TKADVTQALK QVKCQRRIAL TGSPLQNNLM EYYCMVDFVR EGFLGSSHEF RNRYQNPIEN GQHTNSTLTD
0601: VKIMNQRSHI LYEQLKGFVQ RMDMNVVKKD LPPKTVFVIT VKLSPLQRKL YKRFLDVHGF TTQVHPEMLR KRCFFAGYQA LARIWNHPGI LQLTKEVKDY
0701: VKHEDAVENF LVDDSSSDEN SDYNVLAGEK MRYANDLLQR KDDNGFFLKG WWNDLLHGKI YKEIDHSGKM VLLMEILTMS SDVGDKVLVF SQSIPTLDLI
0801: ELYLSRIPRR SKREKFWKKG KDWYRLDGRT ESSERQKLVE RFNEPLNKRV KCTLISTRAG SLGINLHAAN RVVIVDGSWN PTYDLQAIYR SWRYGQKKPV
0901: FAYRLLAHGT MEEKIYKRQV TKEGLAARVV DRQQVHRTIS KEEMLHLFEF GDDDNPETLV DLSQDNEHQD NPILVGHSLK HTAPHSNGTS YSDKLMESLL
1001: SKHHPRWIAN YHEHESLLQE NEEEKLSKEE QDMAWEVYQK SLEWEEVQRV PLGESIMPEQ KPEMPIAMPQ NVSESCSILP TKLSRRFTIR KCTNLAHMLT
1101: LRSQGTKFGC STVCGECAQE IRWEDLKKR
0001: MEANEESLKG KIEKLEGKEV IVESKEDEMD IIIEENREAE QEVMEVKARD GRGEQNDVLM EENNNQGEQK DEEMQDASSR SESSDFNSDE DEQILSRRDD
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
Arabidopsis Description
ATRXCHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.