Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032801_P005 | Maize | nucleus | 92.99 | 92.92 |
| Os10t0457700-01 | Rice | nucleus | 68.78 | 77.33 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 76.26 | 75.75 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 76.26 | 75.45 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 74.58 | 74.33 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 76.06 | 71.08 |
| GSMUA_Achr4P25080_001 | Banana | nucleus | 45.52 | 59.84 |
| VIT_14s0036g01460.t01 | Wine grape | nucleus | 55.7 | 55.92 |
| KRH34128 | Soybean | nucleus | 41.74 | 54.83 |
| KRG92726 | Soybean | nucleus | 53.14 | 53.06 |
| Solyc04g050150.2.1 | Tomato | nucleus | 43.02 | 52.42 |
| AT1G08600.3 | Thale cress | nucleus | 50.91 | 51.05 |
| GSMUA_Achr4P25070_001 | Banana | golgi | 8.7 | 50.99 |
| Solyc04g050160.2.1 | Tomato | nucleus | 10.25 | 48.25 |
| CDY22674 | Canola | nucleus | 24.81 | 47.79 |
| Bra018612.1-P | Field mustard | nucleus | 50.64 | 28.98 |
| EES07568 | Sorghum | nucleus | 13.96 | 21.34 |
| EER91354 | Sorghum | plastid | 11.94 | 19.93 |
| KXG27526 | Sorghum | cytosol | 13.22 | 18.67 |
| EES02658 | Sorghum | nucleus | 15.04 | 18.46 |
| EER92800 | Sorghum | nucleus, plastid | 10.86 | 17.04 |
| KXG24379 | Sorghum | cytosol | 10.92 | 16.7 |
| KXG37026 | Sorghum | nucleus | 11.33 | 13.66 |
| KXG31163 | Sorghum | nucleus | 11.26 | 13.07 |
| OQU77943 | Sorghum | mitochondrion | 12.74 | 12.96 |
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 1.35 | 11.43 |
| KXG22701 | Sorghum | mitochondrion | 14.57 | 10.55 |
| KRH77275 | Soybean | cytosol | 0.13 | 2.17 |
| KRH28211 | Soybean | mitochondrion | 0.13 | 2.17 |
Protein Annotations
| MapMan:12.4.1.3.2 | Gene3D:3.40.50.10810 | UniProt:A0A1B6QKI5 | InterPro:ADD | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR025766 | InterPro:IPR038718 | EnsemblPlants:KXG38419 | ProteinID:KXG38419 | ProteinID:KXG38419.1 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51533 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF843 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| EnsemblPlantsGene:SORBI_3001G230000 | SUPFAM:SSF52540 | UniParc:UPI00081AB9FB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:22219029..22234374
Molecular Weight (calculated)
168072.0 Da
IEP (calculated)
5.205
GRAVY (calculated)
-0.666
Length
1483 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNKDGILSDD KMAKMESVQP NGQLVDIIII DSQSDENKIG VDTSTSIGDS SLKEYKEPPC TTMDNNANEE TSITDDDTES DSYESSLRES DNEQASASVE
0101: GTEVPLTEEE VEELVAEFLE VESKAAQAQE SLEKESLDKV EIEVRLELSE RLQGDELESA VSTEMEQFQM QWENELDDLE IRSSILLEQL DAAGIELPRL
0201: YKSIESQVPN VCETEAWKSR THWAGSQVPE EANRSIKNAD EYLQSRRPVR RKHGRLLEEG ASGFLTGKIP VEDDDSVKCH EKSWSSFNEL IKSKENAENT
0301: FGSSNWASVY LASTPQEAAA LGLQFPGVDE VEEISEVGGV FDDIKGVDEV ELSEEQRRKY RKVTEEDDAK IMKCLQRRLK GKRTRGWCKE NIGLVSSCDE
0401: KPLPENGVLG AKSDLPSSKK LKTDENKVSM ETLKHTFEDD DNEKRLKTVI IESDDDMQTD NKRALQKDGE GSSTEVEKVV DIIDLDLFPS QSPKLPTKSL
0501: PKTFKCTICS EMLNASDVHR HPVLDVVVCG SCRFLVIEKN RLEDPVSGGY CTWCARSELL QSCSSCKLLF CTNCLSKNLG EECLSEAKAT GWQCCCCIPS
0601: QLELLISECD KALGGVESSD SESSNTELSG PENSATVSKR RMKKSIRRIM DDTELGEETK RRIAMEKARQ DHLKSMQEQS ATKLRSENIG TPFEAPVKIC
0701: LQDAGDGHIV NLAREEDEEP VRIPSSMSSK LKPHQVEGIR FMWENVIQSV KKVKSGDKGL GCILAHNMGL GKTFQVITFL YTVMRCAQLG LRTALVVTPV
0801: NVLHNWRKEF SKWRPAELKP LRVFMLEDVA RVKRPDLLTR WRVKGGVLLI GYSSFRNLSL GKHVKDKNSA NEIAYALQCG PDILVCDEAH MIKNRRADIT
0901: QALKQVRTQR RIALTGSPLQ NNLMEYYCMV DFVREGFLGS THEFRNRFQN PIENGQHMNS TSDDVKIMNQ RSHILFEQLK GFVQRKSMNV VKNDLPPKKV
1001: FVITVKLSQL QRKLYKRFLD VHGFSSSGYS EKSHSSFFAK YQTLAQVWNH PGLLQMAKEQ RGNLRREDTV ENFMMDESSS DDNVENYLPN GEKQKDRADQ
1101: QSKKSNIVNE ESNWWEELLD ENTYMEADYS GKMTLLLDIL SKSSELGDKV LVFSQSLTTL DLVEFYLAKL QINGKEGKHW KRGKDWYRLD GSTPSSERQN
1201: LVEMFNDPGN TRVKCTLIST RAGSLGINLH AANRVVLLDG SWNPTHDLQA IYRVWRYGQT KPVYAYRLMA HRTMEEKIYK RQVTKEGLAA RVVDRQQVSR
1301: TISKEEMLHL FEFGEEELME QNENGSTIIE KPSTSDTIKT SEPVPVDSLM LSLLSEQTRW ISGYHEHEAL LQENEEERLT KEEKDMALSE WESLRKAALD
1401: SERKSNMSAA PTYPNVVRPL KPASRSRQLQ QPKVNSNNQK KCNNLTHLLT LRSHGTKAGC TTTCDECGQE ISWETLNRDG RSR
0101: GTEVPLTEEE VEELVAEFLE VESKAAQAQE SLEKESLDKV EIEVRLELSE RLQGDELESA VSTEMEQFQM QWENELDDLE IRSSILLEQL DAAGIELPRL
0201: YKSIESQVPN VCETEAWKSR THWAGSQVPE EANRSIKNAD EYLQSRRPVR RKHGRLLEEG ASGFLTGKIP VEDDDSVKCH EKSWSSFNEL IKSKENAENT
0301: FGSSNWASVY LASTPQEAAA LGLQFPGVDE VEEISEVGGV FDDIKGVDEV ELSEEQRRKY RKVTEEDDAK IMKCLQRRLK GKRTRGWCKE NIGLVSSCDE
0401: KPLPENGVLG AKSDLPSSKK LKTDENKVSM ETLKHTFEDD DNEKRLKTVI IESDDDMQTD NKRALQKDGE GSSTEVEKVV DIIDLDLFPS QSPKLPTKSL
0501: PKTFKCTICS EMLNASDVHR HPVLDVVVCG SCRFLVIEKN RLEDPVSGGY CTWCARSELL QSCSSCKLLF CTNCLSKNLG EECLSEAKAT GWQCCCCIPS
0601: QLELLISECD KALGGVESSD SESSNTELSG PENSATVSKR RMKKSIRRIM DDTELGEETK RRIAMEKARQ DHLKSMQEQS ATKLRSENIG TPFEAPVKIC
0701: LQDAGDGHIV NLAREEDEEP VRIPSSMSSK LKPHQVEGIR FMWENVIQSV KKVKSGDKGL GCILAHNMGL GKTFQVITFL YTVMRCAQLG LRTALVVTPV
0801: NVLHNWRKEF SKWRPAELKP LRVFMLEDVA RVKRPDLLTR WRVKGGVLLI GYSSFRNLSL GKHVKDKNSA NEIAYALQCG PDILVCDEAH MIKNRRADIT
0901: QALKQVRTQR RIALTGSPLQ NNLMEYYCMV DFVREGFLGS THEFRNRFQN PIENGQHMNS TSDDVKIMNQ RSHILFEQLK GFVQRKSMNV VKNDLPPKKV
1001: FVITVKLSQL QRKLYKRFLD VHGFSSSGYS EKSHSSFFAK YQTLAQVWNH PGLLQMAKEQ RGNLRREDTV ENFMMDESSS DDNVENYLPN GEKQKDRADQ
1101: QSKKSNIVNE ESNWWEELLD ENTYMEADYS GKMTLLLDIL SKSSELGDKV LVFSQSLTTL DLVEFYLAKL QINGKEGKHW KRGKDWYRLD GSTPSSERQN
1201: LVEMFNDPGN TRVKCTLIST RAGSLGINLH AANRVVLLDG SWNPTHDLQA IYRVWRYGQT KPVYAYRLMA HRTMEEKIYK RQVTKEGLAA RVVDRQQVSR
1301: TISKEEMLHL FEFGEEELME QNENGSTIIE KPSTSDTIKT SEPVPVDSLM LSLLSEQTRW ISGYHEHEAL LQENEEERLT KEEKDMALSE WESLRKAALD
1401: SERKSNMSAA PTYPNVVRPL KPASRSRQLQ QPKVNSNNQK KCNNLTHLLT LRSHGTKAGC TTTCDECGQE ISWETLNRDG RSR
0001: MEANEESLKG KIEKLEGKEV IVESKEDEMD IIIEENREAE QEVMEVKARD GRGEQNDVLM EENNNQGEQK DEEMQDASSR SESSDFNSDE DEQILSRRDD
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
Arabidopsis Description
ATRXCHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.