CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34530	Sorghum	endoplasmic reticulum, golgi, plasma membrane	8.4	98.29
Zm00001d039160_P031	Maize	cytosol, mitochondrion, nucleus, plasma membrane	94.24	94.42
HORVU1Hr1G094870.2	Barley	mitochondrion	84.38	83.52
TraesCS1D01G450200.1	Wheat	mitochondrion	84.08	83.23
TraesCS1B01G476500.1	Wheat	mitochondrion	83.98	83.13
TraesCS1A01G442400.2	Wheat	mitochondrion	83.79	82.94
CDX78226	Canola	cytosol	7.08	78.38
PGSC0003DMT400076122	Potato	cytosol, nucleus, plastid	26.66	75.21
GSMUA_Achr4P27500_001	Banana	mitochondrion	68.55	68.42
Solyc08g074500.2.1	Tomato	cytosol, nucleus, plastid	41.7	67.35
VIT_15s0024g00350.t01	Wine grape	mitochondrion	63.38	64.19
KRH23760	Soybean	mitochondrion	62.65	62.68
KRH40039	Soybean	mitochondrion	62.06	62.09
Bra007061.1-P	Field mustard	mitochondrion	61.33	61.33
CDX73492	Canola	mitochondrion	61.18	60.21
AT3G54280.2	Thale cress	mitochondrion	61.04	58.71
CDX78225	Canola	mitochondrion	54.35	55.13
EER91354	Sorghum	plastid	9.28	21.4
KXG27526	Sorghum	cytosol	10.6	20.67
EES07568	Sorghum	nucleus	9.33	19.69
EES02658	Sorghum	nucleus	11.08	18.79
KXG38419	Sorghum	nucleus	10.55	14.57
EER92800	Sorghum	nucleus, plastid	6.35	13.76
KXG24379	Sorghum	cytosol	6.01	12.68
KXG37026	Sorghum	nucleus	6.88	11.46
OQU77943	Sorghum	mitochondrion	8.01	11.25
KXG31163	Sorghum	nucleus	6.84	10.95

Protein Annotations

Gene3D:1.25.10.10	MapMan:12.4.1.4.2	MapMan:15.3.5.7.2	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A1B6PAP4
InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	InterPro:DUF3535	GO:GO:0000166	GO:GO:0003674
GO:GO:0005215	GO:GO:0005319	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006810
GO:GO:0006869	GO:GO:0008150	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR011989	InterPro:IPR014001	InterPro:IPR021133	InterPro:IPR038718	EnsemblPlants:KXG22701
ProteinID:KXG22701	ProteinID:KXG22701.1	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFAM:PF02985
PFAM:PF12054	PFscan:PS50077	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR36498	SMART:SM00487
SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	EnsemblPlantsGene:SORBI_3009G256400	SUPFAM:SSF48371	SUPFAM:SSF52540
UniParc:UPI00081AD472	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:59004154..59018577

Molecular Weight (calculated)

227224.0 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.239

Length

2048 amino acids

Sequence
(BLAST)

0001: MAQNSSRLHR LLTLLDTGST QATRFAAARQ IGEIAKSHPQ ELNSLLKKVS QYTRSKNWDT RVAAAHAIGA IAENVKHTSL KDLYASVQAE KHASGFSDGS
0101: DDAGSALPQT DSATTSDLAF GSFDIGRVLE FGSPLLASGG QEYDIADNGK NPAERLARQK QNLRRRLGLD VCEQFMDVSD VIKDEDLLAQ KNYWGSHVQN
0201: NGFHSFNSGR NIQQLVSTMV PRYPKHSNFR SRRLSARELN MLKRKAKSNA KDHTKAVSED DEVTLKGYVP SNGASSEQAG PQNDVFDTAV DEDNLEYSEN
0301: GRWPFQQFVD QLIHDMFDPI WEVRHGTIMA LREILTHHGG CAGVYFPDLS LPSADLDGKT NFDSLKREHG IDLNEDVRVE RLEPALKRHK KEPNCSESIY
0401: RANDKEFANS DYPKAEGDPS NVPDVLTGEP SSTHVKVEPE FGVEASTDPS KVDSTCKSLQ EELNSISHPS SHIHAPENPK FMKLMKLAKY SYMKNWEFLQ
0501: DCAIRFLCVL SLDRFGDYVS DQVVAPVRET CAQALGAVLK YMHPSLVCHT FKILLQMQRR QEWEVRHGSL LGIKYLVAVR QEMLKDLLDY IIHACKAGLE
0601: DPDDDVRAVA AEALIPAADS LVRLNDQILR PIVMLLWDIL LDLDDLSPST SSVMNLLAEI YSRPEMVPKM LGTAASGEKG EFDLNEATQI AEQEDRLTSI
0701: ENPYGLATLT PRLWPFMRHS ITSVRRSAIR TLEKLLEVGN TRSSVGTTPS KLWPTSILGD ALQVVFQNLL LESNDDILHS SERAWKLLLQ CPEKDLEYAA
0801: RLYFSNWVQL ATTPFGSALD STRMFSPVAL PRGNRSRAAA KIRSARLDHE YTRMISFGCT GESTSHEKHL DVPSSVSKII VGADPDKSVT HTRVLTSMAL
0901: GLFASKLPVS SWQVVLSPLA NDLMSLSGVQ RQVASMIIVS WFKDLRGRDP VSVGTLLTSL SSLKEWLLDL LTCSDPALPT KDSVLPYSEL SRTYTKMRNE
1001: ANNLLNSIDS CAAFKDYISS LNLNVDVLSV DDAINFASKL LLPSESDLPS ESEKIFLNNI ESAKQGLLST SGYLKCVQNN LHVTVSSLVA SAVVWMSCLP
1101: SKLNPVILPL MAAIKREQEE VLQDKAADAL AELIFSCVGR KPGPNDKLTK NLCTLTCTDA SETPQAAIIN SMQVIEDQNL LSIGKRFSSH RSRGHTTSGG
1201: DERSKMEGFI SRRGSELAFK HLCEKFGPSL FEKLPKLWDC LTEFLKPVKT EDGIPKNDAS IAQLGRSYED KDPQSLINNI QVIRSISPHL AEPLRPQLLN
1301: LLPCILGCVR HPHVAVRLAA ARCITSMAKS LTDDVMVLVI ENVIPMLSDL SSVCARQGAG ILLSLLVQGL AVELVPYAPF LVVPLLKCMS DPDGSVRQTV
1401: THSFAALVPL LPLSRGASLP GGLSERLSSS AEDVQFLEQL LDNTQIDDFK LNIDLSVELR RYQQEGINWL AFLRRFKLHG ILCDDMGLGK TLQASAIVAS
1501: DIAEARARND DKNLTSLIIC PSTLVAHWEY EIEKYIDTSI LKPLQYVGSS QDRVTLRSEF DKVNVIITSY DIIRKDIDFL GSIPWNYCVL DEGHIIKNSR
1601: SKITSAVKQL KAQHRLILSG TPIQNNVLEL WSLFDFLMPG FLGTEKQFQA TYGKPLLAAK DSKCSAKDAE AGILAMEALH KQVMPFLLRR TKDEVLSDLP
1701: EKIIQDRYCD LSPLQLKLYD KFSSSNAKEE ISTIVKANES EESAPQPKAT RHVFQALQYL LKLCGHPLLA TGESPPNHLV DLLKEIGVGS GSELHELHHS
1801: PKLVALQEIL HECGIGSEVS SPDASTAVGQ HRVLIFAQHK AFLDIIEKDL FQSHMRSVTY LRLDGSVDPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMKDL QAMDRAHRLG QRKVVNVHRL IMRGTLEEKV MSLQRFKVSV ANAVINAENS SLKTMNTDQL LDLFTSTPAS RKASVLPRGS
2001: SDEQSKDSKR KSGGKGLKSI LNGLDELWDQ SQYADEYDLN QFLAKLNG

Best Arabidopsis Sequence Match ( AT3G54280.1 )
(BLAST)

0001: MAQQQSSRLN RLLTLLDTGS TQATRLTAAK QIGDIAKSHP QDLSSLLRKV LHHLRSKKWD TRVAAAHAIG AIVLNVKHPS LSELLNSLAT KLGEAGISDN
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG

Arabidopsis Description

RGD3ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.