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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G450200.1 Wheat mitochondrion 96.47 96.47
TraesCS1B01G476500.1 Wheat mitochondrion 96.47 96.47
TraesCS1A01G442400.2 Wheat mitochondrion 96.28 96.28
KXG34530 Sorghum endoplasmic reticulum, golgi, plasma membrane 7.39 87.43
KXG22701 Sorghum mitochondrion 83.52 84.38
Zm00001d039160_P031 Maize cytosol, mitochondrion, nucleus, plasma membrane 82.31 83.32
CDX78226 Canola cytosol 6.77 75.68
PGSC0003DMT400076122 Potato cytosol, nucleus, plastid 25.86 73.69
GSMUA_Achr4P27500_001 Banana mitochondrion 67.09 67.64
Solyc08g074500.2.1 Tomato cytosol, nucleus, plastid 40.84 66.64
VIT_15s0024g00350.t01 Wine grape mitochondrion 62.88 64.34
KRH23760 Soybean mitochondrion 61.38 62.04
KRH40039 Soybean mitochondrion 60.85 61.5
Bra007061.1-P Field mustard mitochondrion 60.66 61.28
CDX73492 Canola mitochondrion 60.42 60.07
AT3G54280.2 Thale cress mitochondrion 59.98 58.29
CDX78225 Canola mitochondrion 53.99 55.32
HORVU6Hr1G021370.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 3.14 27.08
HORVU1Hr1G064000.1 Barley cytosol, nucleus 4.11 26.56
HORVU6Hr1G061730.1 Barley cytosol, nucleus 4.2 24.65
HORVU6Hr1G021360.1 Barley cytosol, mitochondrion, nucleus 2.66 24.44
HORVU7Hr1G119270.3 Barley nucleus 2.9 21.43
HORVU1Hr1G071540.2 Barley nucleus 2.8 21.25
HORVU2Hr1G037590.4 Barley plastid 8.84 20.87
HORVU6Hr1G078680.2 Barley nucleus 8.94 18.94
HORVU3Hr1G014660.2 Barley nucleus 10.68 18.11
HORVU2Hr1G127340.1 Barley cytosol 8.84 16.53
HORVU2Hr1G024970.1 Barley nucleus 2.46 15.6
HORVU1Hr1G038370.1 Barley nucleus 10.25 14.25
HORVU2Hr1G034330.2 Barley mitochondrion, nucleus, plastid 5.85 12.41
HORVU5Hr1G085320.1 Barley plastid 5.8 12.31
HORVU4Hr1G074230.3 Barley nucleus, plastid 6.04 12.18
HORVU3Hr1G054100.2 Barley nucleus 6.96 11.32
HORVU2Hr1G014660.2 Barley nucleus 6.91 11.31
HORVU3Hr1G014620.1 Barley nucleus 0.58 11.11
HORVU1Hr1G062970.3 Barley mitochondrion 7.68 10.73
HORVU6Hr1G061720.1 Barley cytosol 1.35 7.89
HORVU3Hr1G014630.1 Barley cytosol, nucleus, plastid 0.39 2.64
Protein Annotations
Gene3D:1.25.10.10MapMan:12.4.1.4.2MapMan:15.3.5.7.2Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:ARM-like
InterPro:ARM-type_foldncoils:CoilInterPro:DUF3535GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005524InterPro:HEATInterPro:HEAT_type_2EnsemblPlantsGene:HORVU1Hr1G094870EnsemblPlants:HORVU1Hr1G094870.2
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR011989InterPro:IPR014001InterPro:IPR021133
InterPro:IPR038718UniProt:M0VUU3InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF02985
PFAM:PF12054PFscan:PS50077PFscan:PS51192PFscan:PS51194PANTHER:PTHR36498SMART:SM00487
SMART:SM00490InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF48371SUPFAM:SSF52540UniParc:UPI0002955369
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:+:556670258..556684912
Molecular Weight (calculated)
229383.0 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.216
Length
2069 amino acids
Sequence
(BLAST)
0001: MAAQSSSRLH RLLTLLDTGS TQATRSAAAR QIGEIAKTHP QELNALLKKV SQYLRSKNWD TRVAAAQAIG AIAENVKHTT VKDLFAAVEA EKHASGLSDE
0101: TGDVGSALPL PDTTATSELA FGSFDINRVL EFGSPLLSSG GQEFDVANDN GKNPADRLAR QKQNLRRRLG LDVCEQFMDF NDVFKDEDLL AQKNYWGANV
0201: QNNGFYSYNS GQNIQHLVAS MVPRYPKHST FRPKRLSARE RNMLKRKAKS NAKDHTKSVT EDEEVVLKNS ASSNGASSDQ AGAYNDASDT VADEDNVEYS
0301: DSGRWPFQQF VDQLILDMFD PIWEVRHGTI MALREILTHQ GACAGVYFPD LSSPFADLDD KTDLDTLKKP HGIDLNEEID VEHLEPVLKK HKKEEPNPSE
0401: IMLEPVVERH MEEEKPIPSE IMDIDVDKEL VNPDDSKAEA DLSNVLTVSS GEPNSAHVKV EPELHLDSST DPSKVEVSCT SLHSVPNLAS NPSSVVHAPE
0501: NSKYVKLMKL AKYSCMKNWE FLQDCAIRFL CALSLDRFGD YVSDQVVAPV RETCAQALGA VLKYMHPSLV CHTLNILLQM QRRQEWEVRH GSLLGIKYLV
0601: AVRKEMLKDL FEYVLHACKA GLEDPDDDVR AVAAEALIPA AASLVRLNDQ MLNSVVMLLW DILLDLDDLS PSTSSVMNLL AEIYSQPEMV PRMLGTAALS
0701: EIEFDLNKAT QIAEQEDKLA YSENPYVLAT LTPRLWPFMR HSITSVRRSA IRTLERLLEV GNTRSSAGDT PSKFWTTSIL GDSLQVVFQN ILLESNDEIL
0801: QSSERAWKLL LQCPEKDLEC AAMSYFSNWV QLATTPYGST LDSTKMFMPV ALPRGSRSRA AKIRTAKLEN ESSRMISFGP TGENTSHEKQ FDVSSNVPKI
0901: IVGADSDKSV THTRVLTAMA LGLFASKLPV GSWQVVLTPL ANDVMSLSGV QRQVASLVIV SWFKDLRGRD LAAVGTLLAF FSSVKEYLLD LLSCSDPSFP
1001: TKGSVLPYSE LARTYTKMRN EATNLFRAVE SCAIFKDYAS SLNFNVDMLS VDDAITFASR LSLPAEFDPP SDSEKIVLNN IESAKQGLLS TSGYLKCVQN
1101: NLHVTVSSLV ASAVVWMSGL PSKLNPVILP LMAAIKREQE ELLQDKAADA LAELIFGCVG RKPGPNDKLT KNLCTLACTD ISETPQAAVI NSIQVIEDQN
1201: LLSIGKRFSN HKSRGHVNSG GDERTKTEGY ISRRGSELAL KHLCEKFGSS LFEKLPKLWD CLTEFLEPIK IEDAIQKDDP SIAQLGRSCE DKDPQSLINN
1301: IQVVRSITPH LPEPLRPQLL SLLPCILGCV RHSHVAVRLA AARCITSMAK SLTGNVMVVV IENAIPMLSD SSSVCARQGA GMLLSLLVQG LAVELVPYAP
1401: FLVVPLLRCM SDPDGSVRQS VTHSFAALVP LLPLAKGVPL PSGLSERLYS STDDAQFLEQ LLDNSQIDDH KLNIHLSVEL RRYQQEGINW LAFLRRFKLH
1501: GILCDDMGLG KTLQASAIVA SDIAESRARN DDKDPKSLII CPSTLVAHWE YEVEKYIDST IMKPLQYTGS SQDRMTLRGQ FDKFNVIITS YDIIRKDIDF
1601: LESIIWNYCV LDEGHIIKNS RSKITSAVKQ LKAQHRLILS GTPIQNNVLE LWSLFDFLMP GFLGTEKQFQ STYGKPLIAA KDSKCSAKDA EAGILAMEAL
1701: HKQVMPFLLR RTKDEVLSDL PEKIIQDRHC NLSHLQLKLY DKFSSSNAKE EISTIVKANE SEPSTSQPKA TRHVFQALQY LLKLCSHPLL VIGESPPDYI
1801: VEHLKEIGMG TGDELHELHH SPKLVALQEI LHECGIGSET SSPDASAAVG QHRVLIFAQH KAFLDIIEKD LFQSHMRSIT YLRLDGSVQT DKRFEIVKTF
1901: NSDPTIDVLL LTTHVGGLGL NLTSADTLVF MEHDWNPMKD LQAMDRAHRL GQRKVVNVHR LIMRGTLEEK VMSLQRFKVS VANAVINSEN ASLKTMNTDQ
2001: LLDLFTSTPA SRKASVLPSS SSATEEESNK GKSGRKGLKS ILSGLDELWD QSQYADEYDM NQFLAKLNG
Best Arabidopsis Sequence Match ( AT3G54280.1 )
(BLAST)
0001: MAQQQSSRLN RLLTLLDTGS TQATRLTAAK QIGDIAKSHP QDLSSLLRKV LHHLRSKKWD TRVAAAHAIG AIVLNVKHPS LSELLNSLAT KLGEAGISDN
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG
Arabidopsis Description
RGD3ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.