Factsheet for HORVU5Hr1G085320.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G340400.1	Wheat	nucleus	91.59	93.22
TraesCS5D01G344400.1	Wheat	nucleus	91.49	93.11
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	51.9	75.3
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	73.44	73.44
Os06t0255700-01	Rice	cytosol	65.03	67.02
Os08t0243866-00	Rice	endoplasmic reticulum	41.85	63.16
KXG24379	Sorghum	cytosol	59.49	59.79
Zm00001d024677_P003	Maize	cytosol	58.15	59.68
Zm00001d049605_P037	Maize	cytosol	59.69	59.57
Os08t0289400-00	Rice	cytosol, nucleus	31.28	57.77
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	37.44	53.6
VIT_03s0038g04290.t01	Wine grape	nucleus	11.28	49.77
HORVU2Hr1G024970.1	Barley	nucleus	16.1	48.01
KRH27453	Soybean	cytosol	42.26	46.66
Bra021841.1-P	Field mustard	cytosol	35.49	45.29
AT2G16390.2	Thale cress	nucleus	40.82	44.67
CDX89710	Canola	nucleus	38.67	43.63
VIT_03s0038g00030.t01	Wine grape	nucleus	41.95	43.01
Solyc01g109970.2.1	Tomato	extracellular	40.0	43.0
KRH20806	Soybean	cytosol	41.85	42.81
PGSC0003DMT400079488	Potato	nucleus	39.69	41.84
GSMUA_Achr6P04530_001	Banana	nucleus	36.21	39.8
HORVU4Hr1G074230.3	Barley	nucleus, plastid	39.49	37.52
Bra000888.1-P	Field mustard	cytosol	16.1	34.2
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	12.1	33.43
HORVU1Hr1G071540.2	Barley	nucleus	5.85	20.88
HORVU7Hr1G119270.3	Barley	nucleus	5.85	20.36
HORVU1Hr1G064000.1	Barley	cytosol, nucleus	6.05	18.44
HORVU6Hr1G021370.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	4.41	17.92
HORVU2Hr1G014660.2	Barley	nucleus	22.56	17.41
HORVU3Hr1G054100.2	Barley	nucleus	22.15	16.98
HORVU6Hr1G061720.1	Barley	cytosol	6.15	16.9
HORVU6Hr1G021360.1	Barley	cytosol, mitochondrion, nucleus	3.79	16.44
HORVU1Hr1G062970.3	Barley	mitochondrion	22.46	14.78
HORVU2Hr1G037590.4	Barley	plastid	13.03	14.48
HORVU6Hr1G078680.2	Barley	nucleus	12.92	12.9
HORVU2Hr1G127340.1	Barley	cytosol	12.92	11.38
HORVU1Hr1G038370.1	Barley	nucleus	16.82	11.02
HORVU3Hr1G014660.2	Barley	nucleus	12.82	10.25
HORVU1Hr1G094870.2	Barley	mitochondrion	12.31	5.8
HORVU3Hr1G014620.1	Barley	nucleus	0.21	1.85
HORVU3Hr1G014630.1	Barley	cytosol, nucleus, plastid	0.51	1.65

Protein Annotations

MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A287S3J6	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU5Hr1G085320	EnsemblPlants:HORVU5Hr1G085320.1	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase	PFAM:PF00176
PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF807	SMART:SM00487
SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI000B482BEA	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:574614503..574619304

Molecular Weight (calculated)

110230.0 Da

IEP (calculated)

6.123

GRAVY (calculated)

-0.423

Length

975 amino acids

Sequence
(BLAST)

001: MWLIWNISTS ATSIAGANLF LLSYMITNPS SVSVGMYYRR KRNRPDPINN LSITGNRVHS WGCGSVTKEW DRVYAQKVQL LTFLSTLPES ALSYGPSAET
101: NMANSIEQRE QKESAIIVLD SDDEDESTGA HKQLTPEKNN QLTPEKNKQM IPSEQAGALM RVVTEGIDEV NETMHVRDQN SQIVPYSPSA ALMSQYPVTS
201: YQPSAVLFER VILQKRPEEE RIHDLAVATH KEKIAETQVL PPLPKERKKR KVDRSQVDGD VAIVPRERKR KNEANPAVFD LPSEPYNPVG EDKPVEEDEP
301: MGEDEPMEEE HIQENESDGL DDFWNEYSVA LESSKLDTLE EAANEKEVGE KEVDNVCNHD IQIHEDLGHV CRVCGMIVRR ADTIIDYQWR KASRSRSYFS
401: EKRSKDSDEI VTGDVRVTEE LNALDIAIHP RHQKQMRPHQ LAGFHFLVKN LVSDKPGGCI LAHAPGSGKT FMLISFIQSF LAKYPSGRPL VVLPKGILGT
501: WKREFQQWQV EDIPLYDLYS VKSRAEQLEI LKSWEANRSI LLVGYTQFSW IITSDEGGAV AAGCRERLLM VPNLLIMDEG HLPRTESTNV LESLQRVETP
601: RKVVLSGTLF QNHVSEVFNI VNLVRPKFLK KESSLVARIM SQVSISGRRI SKEDTDKFTE SVEETLLHDG HFTRKVNVIR SLRELTKDVL HYYKGDILDD
701: LPGLVDFSVF LKLSPKQKEV VHKLEAYEKF KKNAVGTALY MHPCLSEMSE VAAADRASNL TDAGVDRLVQ SINVADGVKA RFFTNILALA ESAGEKVLAF
801: SQYLLPMKFL ERLLVKTRGW HLGKEMFVIR GDSKCTMEER ELTVAQFNNS ADAKVLFGSI KACGEGISLV GASRVVILDV HLNPSVTRQA IGRAFRPGQK
901: KKVFVYRLVA ADSPEENTHK TAVKKEVIPK LWFEWSEQRC TSEGFQLNEI DIDDCGDELL DNRAMRQDIK ALYTR

Best Arabidopsis Sequence Match ( AT2G16390.1 )
(BLAST)

001: MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN
101: QQVVEGVINL DDDDDDDTDV EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD LGRGKEMPSA IKAIVEGQTS
201: RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV
301: QFTKAKRNTR TYASETRTKR FGESDNELKF SEEGLMIGGL AAHPTHAAEM KPHQIEGFQF LCSNLVADDP GGCIMAHAPG SGKTFMIISF MQSFLAKYPQ
401: AKPLVVLPKG ILPTWKKEFV RWQVEDIPLL DFYSAKAENR AQQLSILKQW MEKKSILFLG YQQFSTIVCD DTTDSLSCQE ILLKVPSILI LDEGHTPRNE
501: DTNLLQSLAQ VQTPRKVVLS GTLYQNHVKE VFNILNLVRP KFLKLDTSKS AVKRILAYTP CDVRGRLTGS NSDMASMFNE TVEHTLQKSE DFTVKIKVIQ
601: DLREMTKKVL HYYKGDFLDE LPGLADFTVV LNLSPKQLNE VKKLRREKRK FKVSAVGSAI YLHPKLKVFS DKSDDVSDTT MDEMVEKLDL NEGVKAKFFL
701: NLINLCDSAG EKLLVFSQYL IPLKFLERLA ALAKGWKLGK EVFVLTGNTS SEQREWSMET FNSSPDAKIF FGSIKACGEG ISLVGASRIL ILDVPLNPSV
801: TRQAIGRAFR PGQKKMVHAY RLIAGSSPEE EDHNTCFKKE VISKMWFEWN EYCGYQNFEV ETIDVDEAGD TFLESPALRE DIRVLYKR

Arabidopsis Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.