Factsheet for HORVU1Hr1G064000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G021370.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	38.44	51.25
TraesCS1D01G263000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	66.25	31.59
HORVU1Hr1G071540.2	Barley	nucleus	20.62	24.18
HORVU7Hr1G119270.3	Barley	nucleus	20.94	23.93
Os01t0636700-01	Rice	cytoskeleton, cytosol, nucleus	33.44	22.81
KRH59600	Soybean	cytosol, nucleus, plastid	47.81	19.52
KXG27526	Sorghum	cytosol	61.56	18.76
HORVU2Hr1G127340.1	Barley	cytosol	62.19	17.98
Zm00001d002950_P002	Maize	nucleus	57.19	16.88
KRH40956	Soybean	nucleus	51.88	16.12
VIT_04s0044g01680.t01	Wine grape	cytosol	52.5	16.11
AT5G63950.1	Thale cress	cytosol	49.06	14.4
Solyc01g068280.2.1	Tomato	nucleus	52.81	13.91
Bra024250.1-P	Field mustard	cytosol	49.69	13.79
CDY43772	Canola	mitochondrion	49.38	13.62
CDX84469	Canola	cytosol, mitochondrion, nucleus, plastid	48.75	13.61
GSMUA_Achr7P23270_001	Banana	nucleus	55.94	12.57
HORVU3Hr1G014660.2	Barley	nucleus	29.69	7.79
HORVU2Hr1G037590.4	Barley	plastid	20.94	7.64
HORVU6Hr1G078680.2	Barley	nucleus	22.81	7.47
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	19.38	6.36
HORVU6Hr1G061720.1	Barley	cytosol	6.88	6.2
HORVU5Hr1G085320.1	Barley	plastid	18.44	6.05
HORVU4Hr1G074230.3	Barley	nucleus, plastid	18.44	5.75
HORVU1Hr1G038370.1	Barley	nucleus	24.69	5.31
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	5.62	5.1
HORVU3Hr1G054100.2	Barley	nucleus	16.88	4.25
HORVU2Hr1G014660.2	Barley	nucleus	16.25	4.11
HORVU1Hr1G094870.2	Barley	mitochondrion	26.56	4.11
HORVU1Hr1G062970.3	Barley	mitochondrion	15.94	3.44
HORVU2Hr1G024970.1	Barley	nucleus	2.5	2.45
HORVU3Hr1G014620.1	Barley	nucleus	0.62	1.85
HORVU6Hr1G021360.1	Barley	cytosol, mitochondrion, nucleus	0.94	1.33
HORVU3Hr1G014630.1	Barley	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G064000.1	EnsemblPlantsGene:HORVU1Hr1G064000	Gene3D:3.40.50.10810	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase	InterPro:SNF2-like_sf
InterPro:SNF2_N	PANTHER:PTHR10799	PANTHER:PTHR10799:SF756	PFAM:PF00176	PFscan:PS51192	SEG:seg
SMART:SM00487	SUPFAM:SSF52540	UniParc:UPI000B46B540	UniProt:A0A287FYN9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:458089299..458095353

Molecular Weight (calculated)

36524.7 Da

IEP (calculated)

4.590

GRAVY (calculated)

-0.618

Length

320 amino acids

Sequence
(BLAST)

001: VRLPGRRRLC KLGDLSSDDD DQPDVASCET EEPTEVFSDF RDDDDATDQE EENHRDTDTD EWEEAEEDDF QMEAPAGSGK PPYRLPARIS KRLYDHQHQG
101: LIWLWSLHCM ETGGILGDDM GLGKTMQVSA FLAGLFHSGL IRRVLVIAPK TLLTHWIKEL TVVGLRNMIS DYSDSNLDAR DFELQHAFKE GGILLTTYDI
201: ARINYRLIRG DFYNDVDDEE EGKIWNYVVL DEAHFIKNPN TQRAQSLFEI PCVHRIAISG TPIQNNLKEM WALFSFCCPE VLGDKKEFRT RYELPINKGN
301: DKTASNRAKH IGSNVAKENG

Best Arabidopsis Sequence Match ( AT5G63950.1 )
(BLAST)

0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL

Arabidopsis Description

CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.