Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G014620.1 | Barley | nucleus | 8.77 | 99.07 |
| HORVU3Hr1G014630.1 | Barley | cytosol, nucleus, plastid | 24.26 | 97.69 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 96.56 | 96.48 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 95.98 | 94.89 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 96.39 | 92.09 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 64.02 | 85.17 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 18.69 | 82.61 |
| EES02658 | Sorghum | nucleus | 80.16 | 80.96 |
| Zm00001d040203_P003 | Maize | cytosol | 79.67 | 77.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.18 | 65.22 |
| CDX92882 | Canola | nucleus | 59.26 | 64.04 |
| Bra024192.1-P | Field mustard | nucleus | 60.66 | 63.74 |
| CDY51705 | Canola | nucleus | 60.49 | 63.68 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 63.28 | 62.92 |
| PGSC0003DMT400026641 | Potato | nucleus | 61.56 | 61.91 |
| Solyc09g066480.2.1 | Tomato | nucleus | 60.98 | 61.34 |
| KRH19578 | Soybean | nucleus | 61.31 | 61.06 |
| AT2G18760.3 | Thale cress | nucleus | 60.98 | 59.71 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 6.8 | 34.58 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 5.49 | 29.78 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 7.79 | 29.69 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 7.38 | 25.5 |
| HORVU2Hr1G037590.4 | Barley | plastid | 17.3 | 24.06 |
| HORVU7Hr1G119270.3 | Barley | nucleus | 5.25 | 22.86 |
| HORVU1Hr1G071540.2 | Barley | nucleus | 4.92 | 21.98 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 19.18 | 21.14 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 5.57 | 20.8 |
| HORVU6Hr1G078680.2 | Barley | nucleus | 15.82 | 19.75 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 18.36 | 15.05 |
| HORVU5Hr1G085320.1 | Barley | plastid | 10.25 | 12.82 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 10.16 | 12.72 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 13.11 | 12.58 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 12.05 | 11.63 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 9.51 | 11.31 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 18.11 | 10.68 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 12.79 | 10.53 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 2.79 | 9.58 |
Protein Annotations
| MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A287K6P9 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:HORVU3Hr1G014660 | EnsemblPlants:HORVU3Hr1G014660.2 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000B47DCF0 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:33843617..33848276
Molecular Weight (calculated)
135052.0 Da
IEP (calculated)
7.887
GRAVY (calculated)
-0.603
Length
1220 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEEDDDQRL LHSLGVTSAN IDDIERKILS QATTDPKKHD AETSGPAAVG DQESSLTTPQ DDAQAKLHQK LRSVQLEIDA VASTLGGAKQ AAGKKGGGGS
0101: SGSADAEDKK KKKKEKVKEE ENADEDAPRG GALQQALAAE RLRSLKRAKV QIQREILQSG PGPSGSGNQK DKMLAMIVED EPRRKKSLKP PGGPKKKSPT
0201: RRLKTVTYDD DDDFDAVLDG ASAGFMETER EELIRKGLLT PFHKLKGFEK RVEHPGTSSR LNDSAEQAEE TMEASSIAKV AQAMQNMAQS RPTTKLLDAE
0301: FLPKLDAPTA PFQRLGVPLK RPGLPSSDER KNKRLKSKTK RPLPGKKWMN ANSKKESLLD VADEDVGDAA ASVSVSENED EIIEDSDELP PVILEGGLRI
0401: PGSVYTQLFD YQKVGVQWLW ELHCQRAGGI IGDEMGLGKT VQVLSFLGAL HDSGMYKPSI VICPVTLLQQ WRREASKWYP KFKVEILHDS ANSSSKKGKR
0501: YSDSESDVSW DSDQEEVTRV KPAQKWDDLI SRVVNSGSGL LLTTYEQLRI IREKLLDIEW GYAVLDEGHR IRNPNAEVTL VCKQLQTVHR IIMTGAPIQN
0601: KLSELWSLFD FVFPGKLGVL PVFETEFSVP ITVGGYANAT PLQVSTAYRC AVVLRDLIMP YLLRRMKADV NAQLPKKTEQ VLFCSLTQEQ RATYRAFLAS
0701: SEVEQIFDGN RNSLYGIDVL RKICNHPDLL EREQAAQNPD YGNIERSGKM KVVEQVLKVW KDQGHRVLLF AQTQQMLDIL ESFLIARDYQ YRRMDGLTPP
0801: KQRMALIDEF NNTDEIFIFI LTTKVGGLGT NLTGANRVII FDPDWNPSTD MQARERAWRI GQKRDVTVYR LITRGTIEEK VYHRQIYKHF LTNKVLKNPQ
0901: QRRFFKARDM KDLFTLQDDD KNGSTETSNI FGQLSEDVNV GAPDGEERGE RSSALPTSAG AETSVDGNGK SDIKPDQADE ESNILKNLFD AQGVHSAVNH
1001: DAIMSANDDQ KLRLEAEASQ VAQRAAEALR QSRMLRSRDD FAVPTWTGRA GAAGAPSSVR RKFGSTLNTQ LVSSSQPSEG SNGSRVQSLQ VGALHGKALS
1101: SAELLAKMRG TREGAASDAL EHQLSLGSSS NQRPGSTENG RTSNSSSSRN MIVQPEVLIR QLCTYIQQNG GSASSTSLTE HFKNRIQPKD MLVFKNLLKE
1201: IATLQRGAGG AAWVLKPEYG
0101: SGSADAEDKK KKKKEKVKEE ENADEDAPRG GALQQALAAE RLRSLKRAKV QIQREILQSG PGPSGSGNQK DKMLAMIVED EPRRKKSLKP PGGPKKKSPT
0201: RRLKTVTYDD DDDFDAVLDG ASAGFMETER EELIRKGLLT PFHKLKGFEK RVEHPGTSSR LNDSAEQAEE TMEASSIAKV AQAMQNMAQS RPTTKLLDAE
0301: FLPKLDAPTA PFQRLGVPLK RPGLPSSDER KNKRLKSKTK RPLPGKKWMN ANSKKESLLD VADEDVGDAA ASVSVSENED EIIEDSDELP PVILEGGLRI
0401: PGSVYTQLFD YQKVGVQWLW ELHCQRAGGI IGDEMGLGKT VQVLSFLGAL HDSGMYKPSI VICPVTLLQQ WRREASKWYP KFKVEILHDS ANSSSKKGKR
0501: YSDSESDVSW DSDQEEVTRV KPAQKWDDLI SRVVNSGSGL LLTTYEQLRI IREKLLDIEW GYAVLDEGHR IRNPNAEVTL VCKQLQTVHR IIMTGAPIQN
0601: KLSELWSLFD FVFPGKLGVL PVFETEFSVP ITVGGYANAT PLQVSTAYRC AVVLRDLIMP YLLRRMKADV NAQLPKKTEQ VLFCSLTQEQ RATYRAFLAS
0701: SEVEQIFDGN RNSLYGIDVL RKICNHPDLL EREQAAQNPD YGNIERSGKM KVVEQVLKVW KDQGHRVLLF AQTQQMLDIL ESFLIARDYQ YRRMDGLTPP
0801: KQRMALIDEF NNTDEIFIFI LTTKVGGLGT NLTGANRVII FDPDWNPSTD MQARERAWRI GQKRDVTVYR LITRGTIEEK VYHRQIYKHF LTNKVLKNPQ
0901: QRRFFKARDM KDLFTLQDDD KNGSTETSNI FGQLSEDVNV GAPDGEERGE RSSALPTSAG AETSVDGNGK SDIKPDQADE ESNILKNLFD AQGVHSAVNH
1001: DAIMSANDDQ KLRLEAEASQ VAQRAAEALR QSRMLRSRDD FAVPTWTGRA GAAGAPSSVR RKFGSTLNTQ LVSSSQPSEG SNGSRVQSLQ VGALHGKALS
1101: SAELLAKMRG TREGAASDAL EHQLSLGSSS NQRPGSTENG RTSNSSSSRN MIVQPEVLIR QLCTYIQQNG GSASSTSLTE HFKNRIQPKD MLVFKNLLKE
1201: IATLQRGAGG AAWVLKPEYG
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.