Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002950_P002 | Maize | nucleus | 87.81 | 85.06 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 16.0 | 74.67 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 46.76 | 73.17 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 40.29 | 70.03 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 21.9 | 68.66 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 60.48 | 66.49 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 15.05 | 65.83 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 20.48 | 65.75 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 18.76 | 61.56 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 60.48 | 59.4 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 37.52 | 58.98 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 42.48 | 56.89 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 57.43 | 54.47 |
| KRH40956 | Soybean | nucleus | 47.24 | 48.16 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 47.71 | 48.03 |
| AT5G63950.1 | Thale cress | cytosol | 45.33 | 43.67 |
| Bra024250.1-P | Field mustard | cytosol | 44.57 | 40.59 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.1 | 40.4 |
| CDY43772 | Canola | mitochondrion | 44.38 | 40.17 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 53.52 | 39.47 |
| Solyc01g068280.2.1 | Tomato | nucleus | 44.86 | 38.77 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 12.86 | 28.78 |
| EER91354 | Sorghum | plastid | 17.24 | 20.38 |
| EES02658 | Sorghum | nucleus | 22.86 | 19.87 |
| EES07568 | Sorghum | nucleus | 17.52 | 18.97 |
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 2.48 | 14.86 |
| KXG24379 | Sorghum | cytosol | 13.71 | 14.85 |
| EER92800 | Sorghum | nucleus, plastid | 12.29 | 13.65 |
| KXG38419 | Sorghum | nucleus | 18.67 | 13.22 |
| KXG37026 | Sorghum | nucleus | 12.76 | 10.89 |
| KXG22701 | Sorghum | mitochondrion | 20.67 | 10.6 |
| KXG31163 | Sorghum | nucleus | 12.86 | 10.56 |
| OQU77943 | Sorghum | mitochondrion | 12.95 | 9.33 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1B6PPE1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0045951 | GO:GO:0046686 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KXG27526 | ProteinID:KXG27526 | ProteinID:KXG27526.1 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3006G281400 | SUPFAM:SSF52540 |
| UniParc:UPI00081ACE4A | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:61123241..61130445
Molecular Weight (calculated)
117273.0 Da
IEP (calculated)
6.563
GRAVY (calculated)
-0.530
Length
1050 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPPPFDLC SDLDDDEPVT AVPKDRHLPA AVPTPNGLND HLLRFTRSFQ RSTQNPNPSP NPQPQPPPPP EATAEEQVGK VKLAGRRRLC KLATTIQLVD
0101: GEEEVDGDNQ DDSESIFDIL DDLTTRFDSL SVQKPGPTER SRTQQLAPLP CAITLDDIDD QIADDGDARP GASSPVQISS SDDEATVNTR RRQVKIETTS
0201: VSSASTHYAR DDDVRAKGKN KGTAKDVGRL NRVSKASSGS DYDNCGGDQG TGTAYAVKQV RNEEFARRPP KISTFRNNDL SDDELGQEKE HLGAAENNSE
0301: DVGWEKTEDF KMDPTGTAAT SKPYKLPGKI FKMLFSHQRE GLRWLWVLHC RGTGGILGDD MGLGKTMQVA AFLAGLFHSR LVKRVLIVAP KTLLAHWTKE
0401: LSIVGLKEKI RDYSGPSTNI RSYELQYAFK EGGILLTTYD IVRNNYKLIR GNSYNNDDEE EGTLWNYIIL DEGHLIKNNK TQRAQSLYEI PCAHRIVISG
0501: TPIQNNLKEM WTLFNFCCPD VLGDKQQFKI RFETPILRGN DKNATAREKH VGSNVAKELR ERIKPYFLRR MKSEVVFDTG ASEEKTLAKK NELIVWLKLT
0601: PCQRKLYTAF LNSELVHLAL QPKASPLAAI TILKKICDHP LLLTKKGAEG VLEGMDEMLN DQDIGMVEKM AMNLADMAHD DDALQVGQDV SCKLSFIMSL
0701: LRNLVGEGHH VLIFSQTRKM LNLIQEAIIL EGYEFLRIDG TTKVSERERI VKDFQEGRGA PIFLLTTQVG GLGLTLTKAA RVIVVDPAWN PSTDNQSVDR
0801: AYRIGQTKNV IVYRLMTSAT IEEKIYKLQV LKGALFRTAT EQKEQTRYFS KSDIQDLFSL PQQGFDVSLT QKQLQEEHGQ QLVMDESLRK HIQFLEQQGI
0901: AGVSHHSLLF SKTATLPTLS ENDALDSKPR AMPMMPQHYY KRSSSDYVAS GAAFALKPKD ESFTVRKYSP SNRSAESPEE IKARINRLSQ TLSNAALVSK
1001: LPDGGEKIRR QISELDEKLA SAEKGQKEEA TEVISLDDLI TDMKNITVPI
0101: GEEEVDGDNQ DDSESIFDIL DDLTTRFDSL SVQKPGPTER SRTQQLAPLP CAITLDDIDD QIADDGDARP GASSPVQISS SDDEATVNTR RRQVKIETTS
0201: VSSASTHYAR DDDVRAKGKN KGTAKDVGRL NRVSKASSGS DYDNCGGDQG TGTAYAVKQV RNEEFARRPP KISTFRNNDL SDDELGQEKE HLGAAENNSE
0301: DVGWEKTEDF KMDPTGTAAT SKPYKLPGKI FKMLFSHQRE GLRWLWVLHC RGTGGILGDD MGLGKTMQVA AFLAGLFHSR LVKRVLIVAP KTLLAHWTKE
0401: LSIVGLKEKI RDYSGPSTNI RSYELQYAFK EGGILLTTYD IVRNNYKLIR GNSYNNDDEE EGTLWNYIIL DEGHLIKNNK TQRAQSLYEI PCAHRIVISG
0501: TPIQNNLKEM WTLFNFCCPD VLGDKQQFKI RFETPILRGN DKNATAREKH VGSNVAKELR ERIKPYFLRR MKSEVVFDTG ASEEKTLAKK NELIVWLKLT
0601: PCQRKLYTAF LNSELVHLAL QPKASPLAAI TILKKICDHP LLLTKKGAEG VLEGMDEMLN DQDIGMVEKM AMNLADMAHD DDALQVGQDV SCKLSFIMSL
0701: LRNLVGEGHH VLIFSQTRKM LNLIQEAIIL EGYEFLRIDG TTKVSERERI VKDFQEGRGA PIFLLTTQVG GLGLTLTKAA RVIVVDPAWN PSTDNQSVDR
0801: AYRIGQTKNV IVYRLMTSAT IEEKIYKLQV LKGALFRTAT EQKEQTRYFS KSDIQDLFSL PQQGFDVSLT QKQLQEEHGQ QLVMDESLRK HIQFLEQQGI
0901: AGVSHHSLLF SKTATLPTLS ENDALDSKPR AMPMMPQHYY KRSSSDYVAS GAAFALKPKD ESFTVRKYSP SNRSAESPEE IKARINRLSQ TLSNAALVSK
1001: LPDGGEKIRR QISELDEKLA SAEKGQKEEA TEVISLDDLI TDMKNITVPI
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.