Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59600 | Soybean | cytosol, nucleus, plastid | 51.39 | 68.37 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 34.8 | 60.1 |
| KRH40956 | Soybean | nucleus | 58.87 | 59.61 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 12.85 | 59.56 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 38.16 | 59.31 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 18.12 | 56.42 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 12.75 | 55.42 |
| AT5G63950.1 | Thale cress | cytosol | 57.24 | 54.77 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 16.97 | 54.13 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 16.11 | 52.5 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 56.18 | 51.13 |
| Bra024250.1-P | Field mustard | cytosol | 56.38 | 51.0 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 46.5 | 50.79 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 32.5 | 50.75 |
| CDY43772 | Canola | mitochondrion | 56.09 | 50.43 |
| Solyc01g068280.2.1 | Tomato | nucleus | 56.76 | 48.72 |
| KXG27526 | Sorghum | cytosol | 48.03 | 47.71 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 46.5 | 45.37 |
| Zm00001d002950_P002 | Maize | nucleus | 46.6 | 44.83 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 45.35 | 42.73 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 49.28 | 36.1 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 12.94 | 28.78 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 26.56 | 22.58 |
| VIT_12s0028g03440.t01 | Wine grape | plastid | 18.02 | 21.51 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 12.66 | 20.47 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 12.08 | 18.5 |
| VIT_03s0063g00580.t01 | Wine grape | nucleus | 17.07 | 18.2 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 3.36 | 15.84 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 12.46 | 13.67 |
| VIT_14s0036g01460.t01 | Wine grape | nucleus | 19.27 | 13.61 |
| VIT_13s0067g01950.t01 | Wine grape | nucleus | 12.66 | 10.4 |
| VIT_15s0024g00350.t01 | Wine grape | mitochondrion | 19.65 | 10.14 |
Protein Annotations
| EntrezGene:100261895 | wikigene:100261895 | MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ProteinID:CBI37508 |
| ProteinID:CBI37508.3 | ncoils:Coil | UniProt:D7U4B1 | EMBL:FN596506 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | EntrezGene:LOC100261895 | wikigene:LOC100261895 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | TIGR:TC56674 | TIGR:TC62634 | UniParc:UPI0001983195 |
| ArrayExpress:VIT_04s0044g01680 | EnsemblPlantsGene:VIT_04s0044g01680 | EnsemblPlants:VIT_04s0044g01680.t01 | unigene:Vvi.9506 | RefSeq:XP_002264260 | RefSeq:XP_002264260.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:23417241..23454255
Molecular Weight (calculated)
117068.0 Da
IEP (calculated)
5.980
GRAVY (calculated)
-0.533
Length
1043 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEKKKAMSL NERHNRLLQD LSAQASKHKP EQQPSAQNHA LLSFSTISEF HSPPDEAKEE EKPVKVKLQG RRRLCKLSSN DDDENTKTGD GFYEPKFSEI
0101: SDFDSPHHCS NAGGNEIRGI LNDLSSRLES LSIETKRNPK RADQTRESLN FAAADVAINQ EKKLDVPEYA SASSSFSVTS DGADSSPDAA WVGDGVDNVV
0201: DDHEAGSEVG SVHDVDNFIS RVHGNRHNGE AANSRRVNVN SVPMGQSSVC DFEEEEEDGN SDDCVILSGK KVVEAAVSRG SKFKEEYDDS DVVDVLDDCT
0301: DGSVLEDESA ITLSGPRSTY KLPGKIAKML YPHQRDGLKW LWSLHCQGKG GILGDDMGLG KTMQICGFLA GLFHSCLLRR AVVVAPKTLL SHWIKELSAV
0401: GLSEKTREYY GTCTKTRQYE LQYVLQDKGV LLTTYDIVRN NSKSLCGGNY FHDKRSEDDF TWDYMILDEG HLIKNPSTQR AKSLMEIPCA HRIVVSGTPI
0501: QNNLKELWAL FSFCCPELLG DKNWFKVKYE SPILRGNDKN ASDREKHISS RVAKELRERI QPYFLRRLKN EVFHEDDASE TAKLSKKNEI IVWLRLTSCQ
0601: RQLYEAFLNS EIVLSAFDGS PLAAITILKK ICDHPLLLTK RAVEDVLEGM DSMLNQEDLG MASKLAMHLA TAYERDDFLE KNDNVSSKMS FILALLDTLI
0701: PEGHNVLIFS QTRKMLNLIE ELLISNGYKF LRIDGTTKAN DRVKIVNDFQ DGVGAPIFLL TSQVGGLGLT LTKADRVIVV DPAWNPSTDN QSVDRAYRIG
0801: QTKDVIVYRL MTCGTIEEKI YRKQIFKGGL FRTATEHKEQ TRYFSQQDLQ ELFSLPKHGF DVSVTQQQLH EEHDHQHNMD ESLKEHIKFL ETQGIAGVSH
0901: HNLLFSKTAR VLVVDEEEEV ARASRTGTTS VMNKSAGSSH EQDVEWAQYA FKPKEVNLHK TNSSADSAGK LTESEIKGRI NRLSQILANK ATVSKLPDKG
1001: ERIQKQIAEL NLELDKMRMT KRIETEVIDL DDVTGKLENV LNL
0101: SDFDSPHHCS NAGGNEIRGI LNDLSSRLES LSIETKRNPK RADQTRESLN FAAADVAINQ EKKLDVPEYA SASSSFSVTS DGADSSPDAA WVGDGVDNVV
0201: DDHEAGSEVG SVHDVDNFIS RVHGNRHNGE AANSRRVNVN SVPMGQSSVC DFEEEEEDGN SDDCVILSGK KVVEAAVSRG SKFKEEYDDS DVVDVLDDCT
0301: DGSVLEDESA ITLSGPRSTY KLPGKIAKML YPHQRDGLKW LWSLHCQGKG GILGDDMGLG KTMQICGFLA GLFHSCLLRR AVVVAPKTLL SHWIKELSAV
0401: GLSEKTREYY GTCTKTRQYE LQYVLQDKGV LLTTYDIVRN NSKSLCGGNY FHDKRSEDDF TWDYMILDEG HLIKNPSTQR AKSLMEIPCA HRIVVSGTPI
0501: QNNLKELWAL FSFCCPELLG DKNWFKVKYE SPILRGNDKN ASDREKHISS RVAKELRERI QPYFLRRLKN EVFHEDDASE TAKLSKKNEI IVWLRLTSCQ
0601: RQLYEAFLNS EIVLSAFDGS PLAAITILKK ICDHPLLLTK RAVEDVLEGM DSMLNQEDLG MASKLAMHLA TAYERDDFLE KNDNVSSKMS FILALLDTLI
0701: PEGHNVLIFS QTRKMLNLIE ELLISNGYKF LRIDGTTKAN DRVKIVNDFQ DGVGAPIFLL TSQVGGLGLT LTKADRVIVV DPAWNPSTDN QSVDRAYRIG
0801: QTKDVIVYRL MTCGTIEEKI YRKQIFKGGL FRTATEHKEQ TRYFSQQDLQ ELFSLPKHGF DVSVTQQQLH EEHDHQHNMD ESLKEHIKFL ETQGIAGVSH
0901: HNLLFSKTAR VLVVDEEEEV ARASRTGTTS VMNKSAGSSH EQDVEWAQYA FKPKEVNLHK TNSSADSAGK LTESEIKGRI NRLSQILANK ATVSKLPDKG
1001: ERIQKQIAEL NLELDKMRMT KRIETEVIDL DDVTGKLENV LNL
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.