Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024250.1-P | Field mustard | cytosol | 92.84 | 93.41 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 88.97 | 90.05 |
| AT5G63950.1 | Thale cress | cytosol | 74.83 | 79.63 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 42.41 | 62.76 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 29.22 | 56.13 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 50.43 | 56.09 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 32.41 | 56.04 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 10.78 | 55.56 |
| KRH40956 | Soybean | nucleus | 48.79 | 54.95 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 15.78 | 54.63 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 14.57 | 51.68 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 10.6 | 51.25 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 13.62 | 49.38 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 40.17 | 48.8 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 27.41 | 47.6 |
| Solyc01g068280.2.1 | Tomato | nucleus | 48.53 | 46.34 |
| KXG27526 | Sorghum | cytosol | 40.17 | 44.38 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 40.26 | 43.69 |
| Zm00001d002950_P002 | Maize | nucleus | 39.4 | 42.16 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 38.88 | 40.74 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 42.07 | 34.27 |
| CDX78226 | Canola | cytosol | 4.4 | 27.57 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 10.43 | 25.8 |
| CDX92882 | Canola | nucleus | 21.38 | 21.97 |
| CDY51705 | Canola | nucleus | 21.38 | 21.4 |
| CDY59589 | Canola | nucleus | 3.02 | 19.89 |
| CDY29038 | Canola | nucleus | 2.93 | 19.32 |
| CDX99258 | Canola | nucleus | 14.91 | 19.07 |
| CDX92308 | Canola | nucleus | 14.83 | 18.88 |
| CDX77430 | Canola | nucleus | 10.69 | 18.43 |
| CDY67491 | Canola | cytosol | 2.24 | 16.46 |
| CDY37734 | Canola | nucleus | 10.6 | 16.27 |
| CDY23754 | Canola | cytosol | 10.69 | 16.08 |
| CDX89710 | Canola | nucleus | 10.69 | 14.35 |
| CDX93009 | Canola | nucleus | 11.72 | 14.02 |
| CDX94823 | Canola | nucleus | 11.47 | 13.65 |
| CDY16534 | Canola | nucleus | 4.83 | 12.84 |
| CDY66441 | Canola | nucleus | 11.38 | 12.78 |
| CDX95047 | Canola | nucleus | 15.78 | 12.36 |
| CDX93550 | Canola | nucleus | 15.78 | 12.26 |
| CDY22674 | Canola | nucleus | 8.02 | 12.08 |
| CDY37413 | Canola | mitochondrion, nucleus | 15.78 | 11.42 |
| CDY32510 | Canola | mitochondrion, nucleus | 15.69 | 11.33 |
| CDY56857 | Canola | cytosol | 11.38 | 10.43 |
| CDX92463 | Canola | nucleus | 11.38 | 10.43 |
| CDX73492 | Canola | mitochondrion | 18.53 | 10.33 |
| CDY47279 | Canola | nucleus | 11.03 | 9.57 |
| CDY10115 | Canola | nucleus | 11.29 | 9.5 |
| CDX78225 | Canola | mitochondrion | 14.48 | 8.32 |
| CDY06321 | Canola | nucleus | 2.67 | 5.33 |
| CDY13196 | Canola | cytosol, nucleus, plastid | 0.26 | 0.77 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | GO:A0A078I105 | UniProt:A0A078I105 | EnsemblPlants:CDY43772 | ProteinID:CDY43772 |
| ProteinID:CDY43772.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00077271001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EDE294 | SEG:seg | : | : | : | : |
Description
BnaA06g23080DBnaA06g23080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I105]
Coordinates
chrLK032568:-:66309..72929
Molecular Weight (calculated)
130748.0 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.481
Length
1160 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADNTTSTRR KPQSLNDRHY RLLQDLSAPP KHAPSSSSTH EETKIKLAGR RRLCKASVKE DVSEEDDDPD LADFDSPGKV DTPLERAGTG NKFTPWDEES
0101: KEAKTEVGDL PSFSMITDFG SPSPHLEPKE ERHGGGGQNE IMDILDDLTS KLGTMSIKKK KDSQISDFES VKPSFSLISD LSESSSKAGA DSLSDRQGNV
0201: GFSIPEEKAS NVFAGERGER VSHVGKQQPF PGQQHYVAKS EGYRPDYNLD RGKGKLEEVD RSLKTTRHVE VSEKLRSVGR SNAARLRDLD DDDDDDCVVL
0301: TGKKAAEMKI HLEKPTKPAR SHNTATHAYE EKVSEDEGSI TFTGPKSSYT LRGKIATILY PHQREGLKWL WSLHIQEKGG ILGDDMGLGK TMQICSFLAG
0401: LFHSKLIKRA MIVAPKTLLP HWMKELATVG LSQMTREYYG NSVKAREYDL NHILQGKGVL LTTYDIVRNN TKALQGYQLY TDDDDEDDIK WDYMILDEGH
0501: LIKNPSTQRA KSLLEIPSSH RIIISGTPIQ NNLKELWALF NFSCPGLLGD KKWFKDNYEH YILRGNDKDA SDRDKRIGST VAKQILKLVV FSRISTQAKE
0601: HIQPFFLRRL KSEVFGDDAT TSRLSKKDEI VVWLRLTACQ RQIYEAFLNS EIVLSAFDGS PLAALTLFFK NLGWLKSKSQ KLLTINLYIN VVSISDIYPF
0701: CLGYMLLGKM VSFLLCFNAS NIYFCYKSCL FNIWELTLAI LKKICDHPLL LTKRAAEDVL EGMESTLTQE EAGVAERLAM HIADNVDTDD FQTKNDSISC
0801: KLTFIMSLLE NLIPEGHRVL IFSQTRKMLN LIQDSLTSNG YSFLRIDGTT KGLDRLKTVE EFQSGHVAPI FLLTSQVGGL GLTLTKADRV IVVDPAWNPS
0901: TDNQSVDRAY RIGQTKDVIV YRLMTSATVE EKIYRKQVYK GGLFKTATEQ KEQIRYFSQQ DLRELFSLPK GGFDVSPTQQ QLYEEHYNQI KLDETLESHV
1001: KFLETLGIAG VSHHSLLFSK TAPIQPIQQD EVEEIRRITT SFVGGPSAKS SQENMINGAV YAFKPKDVNL DKRINISPID ESEWSESEIK ARISRLSMLF
1101: QNKSMVASLP DRGAKIQKQI AELTRELEEI KAVKSNDMPH QVIDLEDISQ KMHKGLNLLE
0101: KEAKTEVGDL PSFSMITDFG SPSPHLEPKE ERHGGGGQNE IMDILDDLTS KLGTMSIKKK KDSQISDFES VKPSFSLISD LSESSSKAGA DSLSDRQGNV
0201: GFSIPEEKAS NVFAGERGER VSHVGKQQPF PGQQHYVAKS EGYRPDYNLD RGKGKLEEVD RSLKTTRHVE VSEKLRSVGR SNAARLRDLD DDDDDDCVVL
0301: TGKKAAEMKI HLEKPTKPAR SHNTATHAYE EKVSEDEGSI TFTGPKSSYT LRGKIATILY PHQREGLKWL WSLHIQEKGG ILGDDMGLGK TMQICSFLAG
0401: LFHSKLIKRA MIVAPKTLLP HWMKELATVG LSQMTREYYG NSVKAREYDL NHILQGKGVL LTTYDIVRNN TKALQGYQLY TDDDDEDDIK WDYMILDEGH
0501: LIKNPSTQRA KSLLEIPSSH RIIISGTPIQ NNLKELWALF NFSCPGLLGD KKWFKDNYEH YILRGNDKDA SDRDKRIGST VAKQILKLVV FSRISTQAKE
0601: HIQPFFLRRL KSEVFGDDAT TSRLSKKDEI VVWLRLTACQ RQIYEAFLNS EIVLSAFDGS PLAALTLFFK NLGWLKSKSQ KLLTINLYIN VVSISDIYPF
0701: CLGYMLLGKM VSFLLCFNAS NIYFCYKSCL FNIWELTLAI LKKICDHPLL LTKRAAEDVL EGMESTLTQE EAGVAERLAM HIADNVDTDD FQTKNDSISC
0801: KLTFIMSLLE NLIPEGHRVL IFSQTRKMLN LIQDSLTSNG YSFLRIDGTT KGLDRLKTVE EFQSGHVAPI FLLTSQVGGL GLTLTKADRV IVVDPAWNPS
0901: TDNQSVDRAY RIGQTKDVIV YRLMTSATVE EKIYRKQVYK GGLFKTATEQ KEQIRYFSQQ DLRELFSLPK GGFDVSPTQQ QLYEEHYNQI KLDETLESHV
1001: KFLETLGIAG VSHHSLLFSK TAPIQPIQQD EVEEIRRITT SFVGGPSAKS SQENMINGAV YAFKPKDVNL DKRINISPID ESEWSESEIK ARISRLSMLF
1101: QNKSMVASLP DRGAKIQKQI AELTRELEEI KAVKSNDMPH QVIDLEDISQ KMHKGLNLLE
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.