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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G476500.1 Wheat mitochondrion 99.32 99.32
TraesCS1A01G442400.2 Wheat mitochondrion 98.84 98.84
HORVU1Hr1G094870.2 Barley mitochondrion 96.47 96.47
KXG34530 Sorghum endoplasmic reticulum, golgi, plasma membrane 7.44 88.0
KXG22701 Sorghum mitochondrion 83.23 84.08
Zm00001d039160_P031 Maize cytosol, mitochondrion, nucleus, plasma membrane 82.12 83.12
CDX78226 Canola cytosol 6.77 75.68
PGSC0003DMT400076122 Potato cytosol, nucleus, plastid 26.0 74.1
GSMUA_Achr4P27500_001 Banana mitochondrion 67.04 67.59
Solyc08g074500.2.1 Tomato cytosol, nucleus, plastid 41.03 66.96
VIT_15s0024g00350.t01 Wine grape mitochondrion 63.12 64.59
KRH23760 Soybean mitochondrion 61.72 62.38
KRH40039 Soybean mitochondrion 61.14 61.8
Bra007061.1-P Field mustard mitochondrion 60.56 61.18
CDX73492 Canola mitochondrion 60.32 59.97
AT3G54280.2 Thale cress mitochondrion 59.84 58.15
CDX78225 Canola mitochondrion 53.84 55.18
TraesCS1D01G263000.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 7.83 24.14
TraesCS6D01G107800.1 Wheat endoplasmic reticulum 3.77 23.85
TraesCS2D01G202400.1 Wheat plastid 8.84 21.11
TraesCS2D01G568400.1 Wheat cytosol 9.28 20.1
TraesCS7D01G144700.1 Wheat cytosol 6.23 19.31
TraesCS3D01G082200.2 Wheat nucleus 10.73 18.18
TraesCS6D01G300900.1 Wheat cytosol 8.99 17.56
TraesCS1D01G143000.1 Wheat nucleus 10.34 14.33
TraesCS4D01G279200.1 Wheat cytosol 5.9 12.83
TraesCS2D01G189900.1 Wheat nucleus 5.9 12.82
TraesCS5D01G344400.1 Wheat nucleus 5.9 12.73
TraesCS2D01G053900.1 Wheat nucleus 6.48 12.34
TraesCS2D01G143100.1 Wheat cytosol 3.48 11.61
TraesCS2D01G087600.1 Wheat nucleus 6.86 11.31
TraesCS3D01G231800.1 Wheat nucleus 6.91 11.26
TraesCS1D01G245400.1 Wheat nucleus 7.83 10.91
Protein Annotations
Gene3D:1.25.10.10MapMan:12.4.1.4.2MapMan:15.3.5.7.2Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:ARM-like
InterPro:ARM-type_foldncoils:CoilInterPro:DUF3535GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005524InterPro:HEATInterPro:HEAT_type_2InterPro:Helicase_ATP-bdInterPro:Helicase_C
InterPro:IPR001650InterPro:IPR011989InterPro:IPR014001InterPro:IPR021133InterPro:IPR038718InterPro:P-loop_NTPase
PFAM:PF00176PFAM:PF00271PFAM:PF02985PFAM:PF12054PFscan:PS50077PFscan:PS51192
PFscan:PS51194PANTHER:PTHR36498SMART:SM00487SMART:SM00490InterPro:SNF2-like_sfInterPro:SNF2_N
SUPFAM:SSF48371SUPFAM:SSF52540EnsemblPlantsGene:TraesCS1D01G450200EnsemblPlants:TraesCS1D01G450200.1TIGR:cd00046TIGR:cd00079
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:-:492606158..492620025
Molecular Weight (calculated)
229579.0 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.233
Length
2069 amino acids
Sequence
(BLAST)
0001: MAAQSSSRLH RLLTLLDTGS TQATRFAAAR QIGEIARTHP QELNALLKKV SQYLRSKNWD TRVAAAQAIG SIAENVKHTS VKDLFAAVEA EKHASGLSDE
0101: TGDVASALPR PDTTATSELA FGSFDINRVL EFGSPLLSSG GQEFDVANDN GKNPSDRLAR QKQNLRRRLG LDVCEQFMDL NDVFKDEDLL AQKNYWGANV
0201: QNNGFYSYNS GQNIQHLVAS MVPRYPKHST FRPKRLSARE RNMLKRKAKS NAKDHTKSIP EDDEVVLKSS ASSNGASSDQ AGTYNDASDT VADEDNVEYS
0301: DSGRWPFQQF VDQLILDMFD PIWEVRHGTI MALREILTHQ GACAGVYFPD LSSPFADLDD KTDSDTLKKP HGIDLNEDID AEHLEPVLKR HKKEELNPSE
0401: IMLEPVVERH MEEEKPNPSE LMDIDADKDL VNPDDSKAEA GLSNVLTVSS GEPNSAHVKV EPELQLDNST DPSKVETSCT SLNSALNSVS NPSSVVHAPD
0501: NSKYVKLMKL AKYSCMKNWE FLQDCAIRFL CALSLDRFGD YVSDQVVAPV RETCAQALGA VLKYMHPSLV CHTLNILLQM QRRQEWEVRH GSLLGIKYLV
0601: AVRKEMLKDL FEYVLHACKA GLEDPDDDVR AVAAEALIPA AASLVRLNDQ LLNSVVMLLW DILLDLDDLS PSTSSVMNLL AEIYSQPEMV PKMLGTAALS
0701: EREFDLNKAT QMAEQEDKLA YSENPYVLAT LTPRLWPFMR HSITSVRRSA IRTLERLLEV CNTRSSAGDA SSNFWPTSIL GDSLQVAFQN ILLESNDEIL
0801: QSSERAWKLL LQCPEKDLEC AAISYFSNWV QLATTPYGST LDSTKMFMPV ALPRGSRSRA AKIRSAKLEH ESSRMISFGS TGENTSHEKQ FDLSSNVPKI
0901: IVGADSDKSV THTRVLTAMA LGLFASKLPV GSWQVVLTPL ANDVMSLSGV QRQVASMVIV SWFKDLRGRD LAAVGTLLAF FSSVKEYLLD LLSCSDPAFP
1001: TKGSVLPYSE LARTYTKMRN EATNLFRTVE SCAVFKDYAS SLNFNADMLS VDDAINFASK LSLPTEFDLP SDSEKIVLNN IESAKQGLLS TSGYLKCVQN
1101: NLHVTVSSLV ASAVVWMSGL PSKLNPVILP LMAAIKREQE ELLQDKAADA LAELIFGCVG RKPGPNDKLT KNLCTLACTD ISETPQAAVI NSIQVIEDQN
1201: LLSIGKRFSN HKSRGHVNSD GEERTKTEGY ISRRGSELAL KHLCEKFGSS LFEKLPKLWD CLTEFLEPIK IEDDIQKDDP SITQLGRSCE DKDPQSLINN
1301: IQVVRSITPH LPEPLRPQLL RLLPCILGCA RHSHVAVRLA AARCITSMAK SLTGNVMVVV IENAIPMLSD SSSVCARQGA GMLLSLLVQG LAVELVPYAP
1401: FLVVPLLRCM SDPDGSVRQS VTHSFAALVP LLPLAKGVPL PSGLSERLYS STEDAQFLEQ LLDNSQIDDH KLNIHLSVEL RRYQQEGINW LAFLRRFKLH
1501: GILCDDMGLG KTLQASAIVA SDIAESRARN DDKDPKSLII CPSTLVAHWE YEVEKYIDSS IMKPLQYIGS SQDRMTLRAQ FDKFNVIITS YDIIRKDIDF
1601: LESVIWNYCV LDEGHIIKNS RSKITSAVKQ LKAQHRLILS GTPIQNNVLE LWSLFDFLMP GFLGTEKQFQ STYGKPLIAA KDSKCSAKDA EAGILAMEAL
1701: HKQVMPFLLR RTKDEVLSDL PEKIIQDRHC NLSHLQLKLY DKFSSSNVKE EISTIVKADE SEPSTSQPKA TRHVFQALQY LLKLCSHPLL VIGESPPDYI
1801: VEHLKEIGMG TGDELHELHH SPKLVALQEI LQECGIGSEI SSPDASAAVG QHRVLIFAQH KAFLDIIEKD LFQSHMRSVT YLRLDGSVQT DKRFEIVKTF
1901: NSDPTIDVLL LTTHVGGLGL NLTSADTLVF MEHDWNPMKD LQAMDRAHRL GQRKVVNVHR LIMRGTLEEK VMSLQRFKVS VANAVINSEN ASLKTMNTDQ
2001: LLDLFTSTPA SRKASVLPSS SSATEEESNK GKPGRKGLKS ILSGLDELWD QSQYADEYDM NQFLAKLNG
Best Arabidopsis Sequence Match ( AT3G54280.1 )
(BLAST)
0001: MAQQQSSRLN RLLTLLDTGS TQATRLTAAK QIGDIAKSHP QDLSSLLRKV LHHLRSKKWD TRVAAAHAIG AIVLNVKHPS LSELLNSLAT KLGEAGISDN
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG
Arabidopsis Description
RGD3ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.