Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076122 | Potato | cytosol, nucleus, plastid | 56.47 | 98.62 |
| CDX78226 | Canola | cytosol | 12.46 | 85.41 |
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 10.41 | 75.43 |
| VIT_15s0024g00350.t01 | Wine grape | mitochondrion | 77.44 | 48.57 |
| KRH23760 | Soybean | mitochondrion | 73.9 | 45.77 |
| KRH40039 | Soybean | mitochondrion | 73.19 | 45.33 |
| Bra007061.1-P | Field mustard | mitochondrion | 72.24 | 44.73 |
| CDX73492 | Canola | mitochondrion | 72.16 | 43.97 |
| AT3G54280.2 | Thale cress | mitochondrion | 71.92 | 42.84 |
| GSMUA_Achr4P27500_001 | Banana | mitochondrion | 68.85 | 42.54 |
| KXG22701 | Sorghum | mitochondrion | 67.35 | 41.7 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 66.88 | 41.49 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 66.96 | 41.03 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 66.96 | 41.03 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 66.8 | 40.94 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 66.64 | 40.84 |
| CDX78225 | Canola | mitochondrion | 60.25 | 37.84 |
| Solyc08g077650.1.1 | Tomato | cytosol | 1.1 | 26.92 |
| Solyc08g077580.1.1 | Tomato | cytosol | 3.15 | 23.12 |
| Solyc08g077590.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 2.92 | 21.26 |
| Solyc01g068300.1.1 | Tomato | cytosol | 6.47 | 21.03 |
| Solyc07g053870.2.1 | Tomato | plastid | 13.88 | 19.84 |
| Solyc08g061410.1.1 | Tomato | cytosol | 6.78 | 19.59 |
| Solyc01g049740.1.1 | Tomato | endoplasmic reticulum, extracellular | 3.71 | 19.5 |
| Solyc08g062000.1.1 | Tomato | cytosol | 5.99 | 19.44 |
| Solyc08g061420.1.1 | Tomato | cytosol | 1.34 | 19.1 |
| Solyc08g062070.1.1 | Tomato | cytosol | 1.97 | 18.8 |
| Solyc03g061640.1.1 | Tomato | cytosol | 2.44 | 18.67 |
| Solyc04g054440.1.1 | Tomato | nucleus | 9.38 | 18.17 |
| Solyc04g056400.2.1 | Tomato | cytosol, nucleus, plastid | 5.28 | 18.16 |
| Solyc08g077610.1.1 | Tomato | nucleus | 9.31 | 17.64 |
| Solyc01g068320.1.1 | Tomato | cytosol | 9.23 | 17.52 |
| Solyc09g066480.2.1 | Tomato | nucleus | 16.72 | 17.48 |
| Solyc08g061370.1.1 | Tomato | cytosol | 2.37 | 17.24 |
| Solyc02g033050.1.1 | Tomato | nucleus | 8.52 | 17.17 |
| Solyc04g056410.2.1 | Tomato | nucleus | 7.89 | 17.04 |
| Solyc08g062080.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 1.58 | 16.81 |
| Solyc08g061340.1.1 | Tomato | cytosol | 2.84 | 16.14 |
| Solyc08g077690.2.1 | Tomato | nucleus | 9.38 | 16.06 |
| Solyc01g060460.1.1 | Tomato | nucleus | 9.38 | 15.64 |
| Solyc08g061990.1.1 | Tomato | mitochondrion | 4.73 | 15.58 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 0.87 | 15.49 |
| Solyc01g068280.2.1 | Tomato | nucleus | 14.43 | 15.06 |
| Solyc04g050150.2.1 | Tomato | nucleus | 14.2 | 14.79 |
| Solyc08g077600.1.1 | Tomato | cytosol | 4.26 | 13.74 |
| Solyc08g062060.1.1 | Tomato | nucleus | 1.1 | 13.21 |
| Solyc08g061390.1.1 | Tomato | cytosol | 2.44 | 12.5 |
| Solyc08g077670.1.1 | Tomato | cytosol | 4.34 | 12.14 |
| Solyc01g109970.2.1 | Tomato | extracellular | 8.28 | 11.58 |
| Solyc06g050510.2.1 | Tomato | nucleus | 9.23 | 9.09 |
| Solyc04g050160.2.1 | Tomato | nucleus | 0.32 | 1.27 |
| Solyc08g074520.1.1 | Tomato | nucleus | 0.32 | 0.61 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:12.4.1.4.2 | MapMan:15.3.5.7.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ncoils:Coil | InterPro:DUF3535 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR011989 | InterPro:IPR014001 |
| InterPro:IPR038718 | UniProt:K4CMG9 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF12054 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF814 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF48371 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc08g074500.2 | EnsemblPlants:Solyc08g074500.2.1 |
| UniParc:UPI000276B0DA | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:58600335..58613927
Molecular Weight (calculated)
141230.0 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.103
Length
1268 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQMSWKCPVE DLEDASKAYF PSWLELATTP YGSSLDTAKM FWPVALPRKS HFKAAAKMRA VKPENDSLKS ICSDSGEGTT VLEKSGEAST SSGKIMVGAD
0101: VDMSVTYTRV VTATVLGILA SRLREGYLQF FVDPLWKALT SLSGVQRQVA SMVLISWFKE LKTRNISDMD GVIAGISSKF RSWLLDLLAC TNPAFPTKDS
0201: LLPYIELSRT YDKMRNEARQ LYHATDLSEM LKDLLSSTPV DLDNLSADDA ITFASKLQFS SINTTGEEPV ERNSLDELET FKQRLLTTSG YLKCVQNNLH
0301: VTVSSLLAAA VVWMNELPVK LNPIILPLMA SIKREQEEIL QSKAAEALAE LIYRCMGRKP GPNDKLIKNL CCLTCMDPCE TPQAGILNSI EIIEEQDLLS
0401: SGSSSHRHKS KVHMLSPGED RSKVEGFISR RGSELALKFL CEKLGGSLFE KLPKLWDCVV EVLKPCSLEG MTAEDERLLS QAIELVKDPQ NLINNIQVVR
0501: SIAPMLDETL RPKLLTLLPC IFRCVRYSHI AVRLAASRCI TTMAKSMTLD VMGSVIENVV PMLGDITSVH SKQGAGMLVS LLVQGLGIEL VPYAPLLVVP
0601: LLRCMSDSDH SVRQSVTHSF ATLVPLLPLA RGVSPPVGLS EHLSRSQEDV KFLEQLIDNS HIDDYKLSTE LKVTLRRYQQ EGINWLAFLK RFNLHGILCD
0701: DMGLGKTLQA SAIVASDLAE HIALNSSQDL PPSLIICPST LVGHWVYEIE KFIDGSLLTT LQYVGSAQER SSLRSQFNQH NVIVTSYDVI RKDVDHLRQL
0801: FWNYCILDEG HIIKNSKSKI TVAVKQLKAQ HRLILSGTPI QNNVLDLWSL FDFLMPGFLG TERQFHASYG KPLLAARDPK CAAKDAEAGV LAMEALHKQV
0901: MPFLLRRTKD EVLSDLPEKI IQDRYCDLSP VQLKLYEQFS GSHVRQEISS MVKHNESDES QKKDLPKASS HVFQALQYLL KLCSHPLLVF GERVSESLSS
1001: VVSELFSPGS DIVSELHQLQ HSPKLVALQE ILSECGIGVD SGSEGTICVG QHRVLIFAQH KALLDIIERD LFQNHMKNVT YLRLDGSVEP EKRFDIVKAF
1101: NSDPTIDVLL LTTHVGGLGL NLTSADTLVF MEHDWNPMRD HQAMDRAHRL GQRKVVNVHR LIMRGTLEEK VMSLQRFKVS VANAVINSEN ASLKTMNTDQ
1201: LLDLFTSAES KKGASRSKRT DEKSDVDSIL PRSGKGLKAI LGGLEELWDQ SQYTEEYNLG QFLAKLNG
0101: VDMSVTYTRV VTATVLGILA SRLREGYLQF FVDPLWKALT SLSGVQRQVA SMVLISWFKE LKTRNISDMD GVIAGISSKF RSWLLDLLAC TNPAFPTKDS
0201: LLPYIELSRT YDKMRNEARQ LYHATDLSEM LKDLLSSTPV DLDNLSADDA ITFASKLQFS SINTTGEEPV ERNSLDELET FKQRLLTTSG YLKCVQNNLH
0301: VTVSSLLAAA VVWMNELPVK LNPIILPLMA SIKREQEEIL QSKAAEALAE LIYRCMGRKP GPNDKLIKNL CCLTCMDPCE TPQAGILNSI EIIEEQDLLS
0401: SGSSSHRHKS KVHMLSPGED RSKVEGFISR RGSELALKFL CEKLGGSLFE KLPKLWDCVV EVLKPCSLEG MTAEDERLLS QAIELVKDPQ NLINNIQVVR
0501: SIAPMLDETL RPKLLTLLPC IFRCVRYSHI AVRLAASRCI TTMAKSMTLD VMGSVIENVV PMLGDITSVH SKQGAGMLVS LLVQGLGIEL VPYAPLLVVP
0601: LLRCMSDSDH SVRQSVTHSF ATLVPLLPLA RGVSPPVGLS EHLSRSQEDV KFLEQLIDNS HIDDYKLSTE LKVTLRRYQQ EGINWLAFLK RFNLHGILCD
0701: DMGLGKTLQA SAIVASDLAE HIALNSSQDL PPSLIICPST LVGHWVYEIE KFIDGSLLTT LQYVGSAQER SSLRSQFNQH NVIVTSYDVI RKDVDHLRQL
0801: FWNYCILDEG HIIKNSKSKI TVAVKQLKAQ HRLILSGTPI QNNVLDLWSL FDFLMPGFLG TERQFHASYG KPLLAARDPK CAAKDAEAGV LAMEALHKQV
0901: MPFLLRRTKD EVLSDLPEKI IQDRYCDLSP VQLKLYEQFS GSHVRQEISS MVKHNESDES QKKDLPKASS HVFQALQYLL KLCSHPLLVF GERVSESLSS
1001: VVSELFSPGS DIVSELHQLQ HSPKLVALQE ILSECGIGVD SGSEGTICVG QHRVLIFAQH KALLDIIERD LFQNHMKNVT YLRLDGSVEP EKRFDIVKAF
1101: NSDPTIDVLL LTTHVGGLGL NLTSADTLVF MEHDWNPMRD HQAMDRAHRL GQRKVVNVHR LIMRGTLEEK VMSLQRFKVS VANAVINSEN ASLKTMNTDQ
1201: LLDLFTSAES KKGASRSKRT DEKSDVDSIL PRSGKGLKAI LGGLEELWDQ SQYTEEYNLG QFLAKLNG
0001: MAQQQSSRLN RLLTLLDTGS TQATRLTAAK QIGDIAKSHP QDLSSLLRKV LHHLRSKKWD TRVAAAHAIG AIVLNVKHPS LSELLNSLAT KLGEAGISDN
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG
Arabidopsis Description
RGD3ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.